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The map label for this gene is 218710597

Identifier: 218710597

GI number: 218710597

Start: 2836537

End: 2837781

Strand: Reverse

Name: 218710597

Synonym: VS_2650

Alternate gene names: NA

Gene position: 2837781-2836537 (Counterclockwise)

Preceding gene: 218710598

Following gene: 218710596

Centisome position: 86.01

GC content: 41.61

Gene sequence:

>1245_bases
ATGAAAAAATGGTTACTGTTAAGTCTTTTGTTATCGACGAACCCCGCGTTTTCTTCCCCCTCTGTTGAAATGCTGCATTG
GTGGACGGCTGCTGGAGAAGAAAAAGCGTGGTCGGTCATCGAGAAGCAATTTGAATCTCTGCCTTATACATTAAAAAGTG
AACCAATTAGTGGCGGTGGTGGTGCACCTGCCAAAGCGATTCTTCAAGCCAGAGCTATTGCCGGGTATTCCCCTGATATT
GCTCTTATGGAAGGTCCGGCTATTCAGTCATGGGCGGCGTTAGGTTTTTTAAATGATGTCAATGAAGTCGCAGAATCGCA
GAGGTGGGATCAGTCGCTGTATCCTGATATTAAAGCCATTCACCAATATGACGGGAACTTTGTCGCCATACCTTTGAATA
TCCATCGATTAAATTGGATGTGGATAAATAAAAAGGTACTAAATCAGCATCAACTTTCATCACCTCAGACGTGGGACTCG
TTACTGTTAGCATTAACTACGCTTAAAAGTAAGGGGGTTAATCCTTTGGCTTTGGGAGAAGACTCTTGGCAAATTGTGCA
AGTTTTTGAAAATATTGCATTCGGAGTAGGTGGGGCAAATTATTATCGACAGGCATTTGTGGATTTAGACCCTGACGCAT
TAAATAGCGATAAAACACTTGAGGCGCTTAAGCGCTTCCGCTCTCTGGCTAATATTGTCGGTAGTGATTTACCGAGTATT
AGTTGGGATCAGGGGACAAAATCTTTGCTTGAAGGGGAGTTTGCCTTTCAATTTACAGGTGATTGGGCTCTGGGAGAGAT
GTTTATTAGTGCAGAAGGTGAAATTCCAGATTACATAGAATGTCGAGCGTTCCCTTCTACGGAAAAAGGTTTTATCTACA
ATGTTGATAGCTTGGCATTTTTTACAAAAGTAACGGGTGAAGATCATAATATGGTATCGGTAATGACCTCGTTATCTTCT
CCCCAATTTCTTTTAGACTTCAGTAAAAAGAAAGGTTCAATACCTGCTCAAGCAAATATACCTGTGAATGAATTATCACG
ATGCCAACAGCAATCTTATCAAGATTACATTCATGCGAGTTCTGAAGGTACAGCTATGCCAAGCTTGACCGATTCAATGG
CTGTTAACCCTGTTCTTCAGAATGCGGTATCCAACGAGTTATATCGCTACTTTATGGACTCTTCCATTTCAGCGGAAACA
CTTATTGGACACCTACATGCTATTAATAATGAGGTGTTTCGTTAG

Upstream 100 bases:

>100_bases
CAATTGCTCGTAGTATCGCAAGGGCACACGGTGGGGACGTTCAGTTATCTAATTCACCAGAAGGTGGGCTTGAGGTGGAC
ATTATTTTGGTGAATGCCCT

Downstream 100 bases:

>100_bases
CTTCTTGTTCTTCTTTTGACTTTAAATGTCTAGCTAGAAATTACTATGTACCTTCGACATTTTCCAGCCTAGGTCTATTG
TAAAAAACGAGTTACAAACT

Product: ABC sugar transporter binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MKKWLLLSLLLSTNPAFSSPSVEMLHWWTAAGEEKAWSVIEKQFESLPYTLKSEPISGGGGAPAKAILQARAIAGYSPDI
ALMEGPAIQSWAALGFLNDVNEVAESQRWDQSLYPDIKAIHQYDGNFVAIPLNIHRLNWMWINKKVLNQHQLSSPQTWDS
LLLALTTLKSKGVNPLALGEDSWQIVQVFENIAFGVGGANYYRQAFVDLDPDALNSDKTLEALKRFRSLANIVGSDLPSI
SWDQGTKSLLEGEFAFQFTGDWALGEMFISAEGEIPDYIECRAFPSTEKGFIYNVDSLAFFTKVTGEDHNMVSVMTSLSS
PQFLLDFSKKKGSIPAQANIPVNELSRCQQQSYQDYIHASSEGTAMPSLTDSMAVNPVLQNAVSNELYRYFMDSSISAET
LIGHLHAINNEVFR

Sequences:

>Translated_414_residues
MKKWLLLSLLLSTNPAFSSPSVEMLHWWTAAGEEKAWSVIEKQFESLPYTLKSEPISGGGGAPAKAILQARAIAGYSPDI
ALMEGPAIQSWAALGFLNDVNEVAESQRWDQSLYPDIKAIHQYDGNFVAIPLNIHRLNWMWINKKVLNQHQLSSPQTWDS
LLLALTTLKSKGVNPLALGEDSWQIVQVFENIAFGVGGANYYRQAFVDLDPDALNSDKTLEALKRFRSLANIVGSDLPSI
SWDQGTKSLLEGEFAFQFTGDWALGEMFISAEGEIPDYIECRAFPSTEKGFIYNVDSLAFFTKVTGEDHNMVSVMTSLSS
PQFLLDFSKKKGSIPAQANIPVNELSRCQQQSYQDYIHASSEGTAMPSLTDSMAVNPVLQNAVSNELYRYFMDSSISAET
LIGHLHAINNEVFR
>Mature_414_residues
MKKWLLLSLLLSTNPAFSSPSVEMLHWWTAAGEEKAWSVIEKQFESLPYTLKSEPISGGGGAPAKAILQARAIAGYSPDI
ALMEGPAIQSWAALGFLNDVNEVAESQRWDQSLYPDIKAIHQYDGNFVAIPLNIHRLNWMWINKKVLNQHQLSSPQTWDS
LLLALTTLKSKGVNPLALGEDSWQIVQVFENIAFGVGGANYYRQAFVDLDPDALNSDKTLEALKRFRSLANIVGSDLPSI
SWDQGTKSLLEGEFAFQFTGDWALGEMFISAEGEIPDYIECRAFPSTEKGFIYNVDSLAFFTKVTGEDHNMVSVMTSLSS
PQFLLDFSKKKGSIPAQANIPVNELSRCQQQSYQDYIHASSEGTAMPSLTDSMAVNPVLQNAVSNELYRYFMDSSISAET
LIGHLHAINNEVFR

Specific function: Part of a binding-protein-dependent transport system for a sugar (Potential) [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 45934; Mature: 45934

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKWLLLSLLLSTNPAFSSPSVEMLHWWTAAGEEKAWSVIEKQFESLPYTLKSEPISGGG
CCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEECCCCCCCCC
GAPAKAILQARAIAGYSPDIALMEGPAIQSWAALGFLNDVNEVAESQRWDQSLYPDIKAI
CCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHH
HQYDGNFVAIPLNIHRLNWMWINKKVLNQHQLSSPQTWDSLLLALTTLKSKGVNPLALGE
HHCCCCEEEEEEEEEEEEEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEECC
DSWQIVQVFENIAFGVGGANYYRQAFVDLDPDALNSDKTLEALKRFRSLANIVGSDLPSI
CCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC
SWDQGTKSLLEGEFAFQFTGDWALGEMFISAEGEIPDYIECRAFPSTEKGFIYNVDSLAF
CCCCCHHHHHCCCEEEEEECCEEEEEEEEECCCCCCCCEEEECCCCCCCCEEEECHHHEE
FTKVTGEDHNMVSVMTSLSSPQFLLDFSKKKGSIPAQANIPVNELSRCQQQSYQDYIHAS
EEEECCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
SEGTAMPSLTDSMAVNPVLQNAVSNELYRYFMDSSISAETLIGHLHAINNEVFR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKWLLLSLLLSTNPAFSSPSVEMLHWWTAAGEEKAWSVIEKQFESLPYTLKSEPISGGG
CCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEECCCCCCCCC
GAPAKAILQARAIAGYSPDIALMEGPAIQSWAALGFLNDVNEVAESQRWDQSLYPDIKAI
CCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHH
HQYDGNFVAIPLNIHRLNWMWINKKVLNQHQLSSPQTWDSLLLALTTLKSKGVNPLALGE
HHCCCCEEEEEEEEEEEEEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEECC
DSWQIVQVFENIAFGVGGANYYRQAFVDLDPDALNSDKTLEALKRFRSLANIVGSDLPSI
CCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC
SWDQGTKSLLEGEFAFQFTGDWALGEMFISAEGEIPDYIECRAFPSTEKGFIYNVDSLAF
CCCCCHHHHHCCCEEEEEECCEEEEEEEEECCCCCCCCEEEECCCCCCCCEEEECHHHEE
FTKVTGEDHNMVSVMTSLSSPQFLLDFSKKKGSIPAQANIPVNELSRCQQQSYQDYIHAS
EEEECCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
SEGTAMPSLTDSMAVNPVLQNAVSNELYRYFMDSSISAETLIGHLHAINNEVFR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]