Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218710244

Identifier: 218710244

GI number: 218710244

Start: 2446598

End: 2447332

Strand: Reverse

Name: 218710244

Synonym: VS_2277

Alternate gene names: NA

Gene position: 2447332-2446598 (Counterclockwise)

Preceding gene: 218710250

Following gene: 218710243

Centisome position: 74.18

GC content: 49.52

Gene sequence:

>735_bases
ATGACGGCAGTGCTTGTTTTGTTTCGAGCCATGTTAGGTAGTCTAAGGGATCTCTTGCCGATCGTGGCGGTGATTGCTTT
CTTCCAGCTTGCTGTTTTGCAAGAACCACTCCCTCATCTGTTGTCTATTCTAACTGGCTTAGTGCTGGTGGTTTTTGGAC
TGACTTTTTTTATCTTTGGCCTTGAGATGGGTCTGTTCCCAATCGGCGAGTCGATGGCTCAAGCTTTTGCTCGTAAGGGG
AGCGTGTTTTGGTTATTGACCTTCGCTTTCTGTTTAGGGTTTGGTACCACCATTGCGGAACCCGCACTAACCGCAGTGGC
CGCCGAAGCAGCAGAAGTGGCCGCTGAAGGTGGTGTTATTCCCAACTCTCTAGACGAAATGGAACAGTACGCCGATGGTT
TGCGTTTCACCGTAGCATTGTCGGTGGGGATCGCCATCTTACTTGGTGTGCTGCGAATCTTAAAAGGTTGGCCAATTCAG
TACATGATCATCGGAGGTTATATTGGAGTTGTGGTGCTCACTGCATTTGCTCCTGAAAACATCATTGGGATTGCGTACGA
CTCTGGCGGAGTGACTACATCGACCATTACCGTTCCGTTAGTGACCGCATTGGGAGTGGGTTTGGCCTCTGCGATTAAAG
GGCGAAATCCGATGATTGATGGCTTTGGATTGATCGCCTTTGCTTCACTGCTGCCGATGATGTTTGTCATGGTCTACGGG
ATGGTGGTGACATGA

Upstream 100 bases:

>100_bases
TTACCAACTGCGTAATATTTGTCACATAAGGAATGATAAGGATTTGCCATGATTATTAGTAATTAATAACCAGACACAAT
TTCAATGACTAGGAGTTGCG

Downstream 100 bases:

>100_bases
TCAGTGCTCAGCAATTTATTGACACCTTTCTTGGCACTGTCATGGATGTGATTCCGATTGCGGTGATCATCTTCGGTTTC
CAATTAGCGGTGCTGCGTAA

Product: major facilitator superfamily permease

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MTAVLVLFRAMLGSLRDLLPIVAVIAFFQLAVLQEPLPHLLSILTGLVLVVFGLTFFIFGLEMGLFPIGESMAQAFARKG
SVFWLLTFAFCLGFGTTIAEPALTAVAAEAAEVAAEGGVIPNSLDEMEQYADGLRFTVALSVGIAILLGVLRILKGWPIQ
YMIIGGYIGVVVLTAFAPENIIGIAYDSGGVTTSTITVPLVTALGVGLASAIKGRNPMIDGFGLIAFASLLPMMFVMVYG
MVVT

Sequences:

>Translated_244_residues
MTAVLVLFRAMLGSLRDLLPIVAVIAFFQLAVLQEPLPHLLSILTGLVLVVFGLTFFIFGLEMGLFPIGESMAQAFARKG
SVFWLLTFAFCLGFGTTIAEPALTAVAAEAAEVAAEGGVIPNSLDEMEQYADGLRFTVALSVGIAILLGVLRILKGWPIQ
YMIIGGYIGVVVLTAFAPENIIGIAYDSGGVTTSTITVPLVTALGVGLASAIKGRNPMIDGFGLIAFASLLPMMFVMVYG
MVVT
>Mature_243_residues
TAVLVLFRAMLGSLRDLLPIVAVIAFFQLAVLQEPLPHLLSILTGLVLVVFGLTFFIFGLEMGLFPIGESMAQAFARKGS
VFWLLTFAFCLGFGTTIAEPALTAVAAEAAEVAAEGGVIPNSLDEMEQYADGLRFTVALSVGIAILLGVLRILKGWPIQY
MIIGGYIGVVVLTAFAPENIIGIAYDSGGVTTSTITVPLVTALGVGLASAIKGRNPMIDGFGLIAFASLLPMMFVMVYGM
VVT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25682; Mature: 25551

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCC
>Mature Secondary Structure 
TAVLVLFRAMLGSLRDLLPIVAVIAFFQLAVLQEPLPHLLSILTGLVLVVFGLTFFIFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LEMGLFPIGESMAQAFARKGSVFWLLTFAFCLGFGTTIAEPALTAVAAEAAEVAAEGGVI
HHHCCHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC
PNSLDEMEQYADGLRFTVALSVGIAILLGVLRILKGWPIQYMIIGGYIGVVVLTAFAPEN
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCC
IIGIAYDSGGVTTSTITVPLVTALGVGLASAIKGRNPMIDGFGLIAFASLLPMMFVMVYG
EEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MVVT
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA