| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218710243
Identifier: 218710243
GI number: 218710243
Start: 2445807
End: 2446601
Strand: Reverse
Name: 218710243
Synonym: VS_2276
Alternate gene names: NA
Gene position: 2446601-2445807 (Counterclockwise)
Preceding gene: 218710244
Following gene: 218710242
Centisome position: 74.16
GC content: 46.29
Gene sequence:
>795_bases ATGATCAGTGCTCAGCAATTTATTGACACCTTTCTTGGCACTGTCATGGATGTGATTCCGATTGCGGTGATCATCTTCGG TTTCCAATTAGCGGTGCTGCGTAAGCCAGTTAATAACTTAGGCAAAGTGCTGATAGGTTTCTTTTACGTCATTCTTGGGT TGTCGCTCTTTTTGATGGGGTTAGAGCTCGCGCTGTTTCCTTTAGGGGAGACTATGGCAATGCAACTCACCGAACCAAGT TTTTTGACTGAGTTCAAGGTCAGTTCAGGCCTTACCTTGGCTTGGTTTGATTATTACTGGGTTTACCTTTTCGCGTTTTG TATTGGGTTCAGTACCACGATAGCCGAGCCCTCTTTGATTGCAGTGGCGATTAAGGCGAACCAAGTATCTGGTGGCAGTA TTAGTGTTAACGGGCTGAGGATCTCCGTGGCGTTAGGCGTAGCGATTGGCATATCGCTAGGTAGTTATCGCATCGTGGCT GGCGACCCTATCCATTACTACATCATTGTTGGTTATGTCATTGTGGTGATTCAGACCTTTTATGCTCCCAAATTGATTAT TCCATTGGCTTACGATTCTGGTGGGGTTACGACATCAACGGTGACGGTTCCTTTAGTGACGGCACTTGGGTTGGGACTCG CGTCAACGGTGCCAGGAAGAAATCCGGTAATTGATGGCTTTGGGTTGATTGCTTTCGCGAGCTTATTTCCAATTATATCC GTGATGGGGTATGCCCAAATAACGCAATGGCTAAACCGATCACAATCCTCTAAGGAGAGCAAAGATGCGCTTTAA
Upstream 100 bases:
>100_bases CGATTAAAGGGCGAAATCCGATGATTGATGGCTTTGGATTGATCGCCTTTGCTTCACTGCTGCCGATGATGTTTGTCATG GTCTACGGGATGGTGGTGAC
Downstream 100 bases:
>100_bases ACTTATCTTAGCGTTTGTAGAAGAGAGCAAGACCGATATCGTGCTCGACGCCGCGCGTGATGCGGGTGCAACAGGGGCAA CCGTGATTAACAATGCCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MISAQQFIDTFLGTVMDVIPIAVIIFGFQLAVLRKPVNNLGKVLIGFFYVILGLSLFLMGLELALFPLGETMAMQLTEPS FLTEFKVSSGLTLAWFDYYWVYLFAFCIGFSTTIAEPSLIAVAIKANQVSGGSISVNGLRISVALGVAIGISLGSYRIVA GDPIHYYIIVGYVIVVIQTFYAPKLIIPLAYDSGGVTTSTVTVPLVTALGLGLASTVPGRNPVIDGFGLIAFASLFPIIS VMGYAQITQWLNRSQSSKESKDAL
Sequences:
>Translated_264_residues MISAQQFIDTFLGTVMDVIPIAVIIFGFQLAVLRKPVNNLGKVLIGFFYVILGLSLFLMGLELALFPLGETMAMQLTEPS FLTEFKVSSGLTLAWFDYYWVYLFAFCIGFSTTIAEPSLIAVAIKANQVSGGSISVNGLRISVALGVAIGISLGSYRIVA GDPIHYYIIVGYVIVVIQTFYAPKLIIPLAYDSGGVTTSTVTVPLVTALGLGLASTVPGRNPVIDGFGLIAFASLFPIIS VMGYAQITQWLNRSQSSKESKDAL >Mature_264_residues MISAQQFIDTFLGTVMDVIPIAVIIFGFQLAVLRKPVNNLGKVLIGFFYVILGLSLFLMGLELALFPLGETMAMQLTEPS FLTEFKVSSGLTLAWFDYYWVYLFAFCIGFSTTIAEPSLIAVAIKANQVSGGSISVNGLRISVALGVAIGISLGSYRIVA GDPIHYYIIVGYVIVVIQTFYAPKLIIPLAYDSGGVTTSTVTVPLVTALGLGLASTVPGRNPVIDGFGLIAFASLFPIIS VMGYAQITQWLNRSQSSKESKDAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28314; Mature: 28314
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISAQQFIDTFLGTVMDVIPIAVIIFGFQLAVLRKPVNNLGKVLIGFFYVILGLSLFLMG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LELALFPLGETMAMQLTEPSFLTEFKVSSGLTLAWFDYYWVYLFAFCIGFSTTIAEPSLI HHHHHHCCCCHHEEEECCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCEE AVAIKANQVSGGSISVNGLRISVALGVAIGISLGSYRIVAGDPIHYYIIVGYVIVVIQTF EEEEEECCCCCCEEEECCEEEEEEEHHHHHEECCCEEEEECCCHHHHHHHHHHHHHHHHH YAPKLIIPLAYDSGGVTTSTVTVPLVTALGLGLASTVPGRNPVIDGFGLIAFASLFPIIS CCCEEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH VMGYAQITQWLNRSQSSKESKDAL HHHHHHHHHHHHCCCCCCHHCCCC >Mature Secondary Structure MISAQQFIDTFLGTVMDVIPIAVIIFGFQLAVLRKPVNNLGKVLIGFFYVILGLSLFLMG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LELALFPLGETMAMQLTEPSFLTEFKVSSGLTLAWFDYYWVYLFAFCIGFSTTIAEPSLI HHHHHHCCCCHHEEEECCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCEE AVAIKANQVSGGSISVNGLRISVALGVAIGISLGSYRIVAGDPIHYYIIVGYVIVVIQTF EEEEEECCCCCCEEEECCEEEEEEEHHHHHEECCCEEEEECCCHHHHHHHHHHHHHHHHH YAPKLIIPLAYDSGGVTTSTVTVPLVTALGLGLASTVPGRNPVIDGFGLIAFASLFPIIS CCCEEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH VMGYAQITQWLNRSQSSKESKDAL HHHHHHHHHHHHCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA