| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is menC [H]
Identifier: 218710158
GI number: 218710158
Start: 2337195
End: 2338202
Strand: Reverse
Name: menC [H]
Synonym: VS_2188
Alternate gene names: 218710158
Gene position: 2338202-2337195 (Counterclockwise)
Preceding gene: 218710159
Following gene: 218710157
Centisome position: 70.87
GC content: 45.34
Gene sequence:
>1008_bases ATGAACTCAGTGAATTCTCAACGTCACGCTAAACTCTACCGTTATCAATTACCTATGGATAGTGGTGTGATTCTTCGTGA CAATAAGTTGAACGAACGCGTTGGCTATATCATCCAACTTGAGTGTGATGGTAAAACTGGTTTTGGCGAAGTTGCGCCTT TGCCAGGTTTTAGCCAAGAAGATGCCGAACAAGCTGGCATTCAGCTGCAACACGAATTAGAGCTTTGGAGCCACAATAAC CCTCAAACGCCTTTTGATGAGTTATATCCTTCTGTTGCCTTCGGTTTTTCGATGGCGATAATGGAATTACGAGGCGAACT TAACGCTGAAGGTAACTACCAAGCGGCACCGTTGTGTACAGGCGATCCAGATGAATTGATCCCTGTGCTGAATGAGATGA AAGGTGAGAAGGTCGCCAAAGTGAAAGTCGGTCTCTACGAAGCGATTCGTGATGGCATGCTAGTGAGCTTATTCCTTGAG TCGATCCCTGATTTGACCCTAAGGCTTGATGCCAACCGCGCGTGGAAACCAGAAAAAGCCAAGCAGTTCATCAAGTACAT TTCGCCTTCACTGCGTCAACGTATTAGCTTTATTGAAGAGCCTTGCCAGAAACCTGAAGATAGCTTAGCTTTTGCTATTG ACCACGGTGTTGCGATTGCATGGGACGAAACACTGCAAGAAGCGGTAAGAAGTCCAGAGTTTAATCTTAGTGACTTAACG GGTGTTAAGGCGGTTGTGATTAAACCAACCTTGATTGGCTCAGTAGAGCGTTGTGTTGCTATCATTGAACGCGCGCAACA ACTTGGTATTAAACCTGTACTAAGCTCAAGCATAGAGTCTAGCCTTGGTTTAACTCAGATTGCTCGATTGGCACAACAGT ACTTGCCTAATGAAGTTCCAGGGCTTGATACGATTGGCTTGTATCAGCAACAGCTAGAAGTCTCTTGGCCGGGTTGTCAG CTTCCAGTTTCAACGCTTGAACAGCAACAATTGATTTGGTCTTCTTAG
Upstream 100 bases:
>100_bases CGACAAATTTCCGCGTAACCCATAGTCTTTCTCTTCTTTAAAATGAGTCGCTAATAGCGGCTCGTTTTGTTTTGATGTTC CCCGTTTTTTAGGAAACTTT
Downstream 100 bases:
>100_bases GCTGATCGTTCGATTGGCTTAGACCGTTCTCAATCTATAACTTGGTTATCTTATGATGCGCCCACAATCTAATCCTCACC CGCTCTGGGTACAGTGGGCG
Product: O-succinylbenzoate synthase
Products: NA
Alternate protein names: OSB synthase; OSBS; 4-(2'-carboxyphenyl)-4-oxybutyric acid synthase; o-succinylbenzoic acid synthase [H]
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MNSVNSQRHAKLYRYQLPMDSGVILRDNKLNERVGYIIQLECDGKTGFGEVAPLPGFSQEDAEQAGIQLQHELELWSHNN PQTPFDELYPSVAFGFSMAIMELRGELNAEGNYQAAPLCTGDPDELIPVLNEMKGEKVAKVKVGLYEAIRDGMLVSLFLE SIPDLTLRLDANRAWKPEKAKQFIKYISPSLRQRISFIEEPCQKPEDSLAFAIDHGVAIAWDETLQEAVRSPEFNLSDLT GVKAVVIKPTLIGSVERCVAIIERAQQLGIKPVLSSSIESSLGLTQIARLAQQYLPNEVPGLDTIGLYQQQLEVSWPGCQ LPVSTLEQQQLIWSS
Sequences:
>Translated_335_residues MNSVNSQRHAKLYRYQLPMDSGVILRDNKLNERVGYIIQLECDGKTGFGEVAPLPGFSQEDAEQAGIQLQHELELWSHNN PQTPFDELYPSVAFGFSMAIMELRGELNAEGNYQAAPLCTGDPDELIPVLNEMKGEKVAKVKVGLYEAIRDGMLVSLFLE SIPDLTLRLDANRAWKPEKAKQFIKYISPSLRQRISFIEEPCQKPEDSLAFAIDHGVAIAWDETLQEAVRSPEFNLSDLT GVKAVVIKPTLIGSVERCVAIIERAQQLGIKPVLSSSIESSLGLTQIARLAQQYLPNEVPGLDTIGLYQQQLEVSWPGCQ LPVSTLEQQQLIWSS >Mature_335_residues MNSVNSQRHAKLYRYQLPMDSGVILRDNKLNERVGYIIQLECDGKTGFGEVAPLPGFSQEDAEQAGIQLQHELELWSHNN PQTPFDELYPSVAFGFSMAIMELRGELNAEGNYQAAPLCTGDPDELIPVLNEMKGEKVAKVKVGLYEAIRDGMLVSLFLE SIPDLTLRLDANRAWKPEKAKQFIKYISPSLRQRISFIEEPCQKPEDSLAFAIDHGVAIAWDETLQEAVRSPEFNLSDLT GVKAVVIKPTLIGSVERCVAIIERAQQLGIKPVLSSSIESSLGLTQIARLAQQYLPNEVPGLDTIGLYQQQLEVSWPGCQ LPVSTLEQQQLIWSS
Specific function: Converts SHCHC to OSB [H]
COG id: COG1441
COG function: function code H; O-succinylbenzoate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family. MenC type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788596, Length=316, Percent_Identity=54.4303797468354, Blast_Score=335, Evalue=2e-93,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013342 - InterPro: IPR010196 [H]
Pfam domain/function: PF01188 MR_MLE [H]
EC number: =4.2.1.113 [H]
Molecular weight: Translated: 37293; Mature: 37293
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSVNSQRHAKLYRYQLPMDSGVILRDNKLNERVGYIIQLECDGKTGFGEVAPLPGFSQE CCCCCCHHHHHHHEEECCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHH DAEQAGIQLQHELELWSHNNPQTPFDELYPSVAFGFSMAIMELRGELNAEGNYQAAPLCT HHHHHCCEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCC GDPDELIPVLNEMKGEKVAKVKVGLYEAIRDGMLVSLFLESIPDLTLRLDANRAWKPEKA CCHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCCCCCCHHH KQFIKYISPSLRQRISFIEEPCQKPEDSLAFAIDHGVAIAWDETLQEAVRSPEFNLSDLT HHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEHHHHHHHHHCCCCCCHHHC GVKAVVIKPTLIGSVERCVAIIERAQQLGIKPVLSSSIESSLGLTQIARLAQQYLPNEVP CCEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCC GLDTIGLYQQQLEVSWPGCQLPVSTLEQQQLIWSS CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MNSVNSQRHAKLYRYQLPMDSGVILRDNKLNERVGYIIQLECDGKTGFGEVAPLPGFSQE CCCCCCHHHHHHHEEECCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHH DAEQAGIQLQHELELWSHNNPQTPFDELYPSVAFGFSMAIMELRGELNAEGNYQAAPLCT HHHHHCCEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCC GDPDELIPVLNEMKGEKVAKVKVGLYEAIRDGMLVSLFLESIPDLTLRLDANRAWKPEKA CCHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCCCCCCHHH KQFIKYISPSLRQRISFIEEPCQKPEDSLAFAIDHGVAIAWDETLQEAVRSPEFNLSDLT HHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEHHHHHHHHHCCCCCCHHHC GVKAVVIKPTLIGSVERCVAIIERAQQLGIKPVLSSSIESSLGLTQIARLAQQYLPNEVP CCEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCC GLDTIGLYQQQLEVSWPGCQLPVSTLEQQQLIWSS CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]