| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709585
Identifier: 218709585
GI number: 218709585
Start: 1718345
End: 1719091
Strand: Reverse
Name: 218709585
Synonym: VS_1595
Alternate gene names: NA
Gene position: 1719091-1718345 (Counterclockwise)
Preceding gene: 218709588
Following gene: 218709584
Centisome position: 52.1
GC content: 39.49
Gene sequence:
>747_bases ATGAGAAAAATAATATTAAACATTGTCTTACTATCGGTGTTTGTTGCGTCTTTATTTCTAACAATTTCATCAGCAATAGA CATTTCAAAAGAAGTGACAGTAAAGCTCCATGAGTTTGATTGGAGTGGTGTCTCCGGTGTAATGGACATGGTCATGGTTA TTTTAACTTTCGTCTTACTGGTTGGACTGAAACAAGGTTCGAAATCTATTGAGGAATCGACCCGAAGTCGTAACGCCGAA TTGTTGAATTGGGCGATGGAAGAGATGTCAGCATTAAAACCTGCGATTAGGTTGGTGACAGACGCTCACAAAAGAGAGCC TTATAGTCAGTTAACTAGTGACGTTAGTGTGGATTATGTATCGACATGGAGCAAAGAAGAATTACAAGCAGCTCAAGCTG TAAGTGTCGCGTTGCAGAGAATGGGGTACTTTGCTACTCATGATTTGGTATCAAAAAAGCATTTTCTGAATCTTTGGGGG CCTTTATATCTATCATGTTGGTACTCACTCGAAGGTTGGGTTAAACATAAGCGACTTCAACTTGATGAACCTTTTGATAT CGCTGATGGTGCATACTCGAGGCTGTACTTTGAAAAATACGCCATGTACTGTGAAGAAAAGTTACCGCCTTTGTTATTGA ATAATACAAGAAAGCAGTTTGGCTTAGAGCCAATGGTTCAACCCAAAGCCCACATTAAGTTGGGCATAAAATTGAAAGCA AGGCTCACAGAAAAGGTTGATATCTAA
Upstream 100 bases:
>100_bases GGTTTTTGACTGGTAAAAAGAGTTACTTAATGTTGGTAATTACTTAGGTTACTATTTAGCAAAGTATTGATTTGATATAC AAAATTTTTGGACGAAGGTT
Downstream 100 bases:
>100_bases CTACTCACCACACAATACTTTTTGGAATCAAAGGGGCTTGTTAGCTTGATCAACACATAAATGCTAAGAGTGTATTGGCT GATCGTATATTGAAGAATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MRKIILNIVLLSVFVASLFLTISSAIDISKEVTVKLHEFDWSGVSGVMDMVMVILTFVLLVGLKQGSKSIEESTRSRNAE LLNWAMEEMSALKPAIRLVTDAHKREPYSQLTSDVSVDYVSTWSKEELQAAQAVSVALQRMGYFATHDLVSKKHFLNLWG PLYLSCWYSLEGWVKHKRLQLDEPFDIADGAYSRLYFEKYAMYCEEKLPPLLLNNTRKQFGLEPMVQPKAHIKLGIKLKA RLTEKVDI
Sequences:
>Translated_248_residues MRKIILNIVLLSVFVASLFLTISSAIDISKEVTVKLHEFDWSGVSGVMDMVMVILTFVLLVGLKQGSKSIEESTRSRNAE LLNWAMEEMSALKPAIRLVTDAHKREPYSQLTSDVSVDYVSTWSKEELQAAQAVSVALQRMGYFATHDLVSKKHFLNLWG PLYLSCWYSLEGWVKHKRLQLDEPFDIADGAYSRLYFEKYAMYCEEKLPPLLLNNTRKQFGLEPMVQPKAHIKLGIKLKA RLTEKVDI >Mature_248_residues MRKIILNIVLLSVFVASLFLTISSAIDISKEVTVKLHEFDWSGVSGVMDMVMVILTFVLLVGLKQGSKSIEESTRSRNAE LLNWAMEEMSALKPAIRLVTDAHKREPYSQLTSDVSVDYVSTWSKEELQAAQAVSVALQRMGYFATHDLVSKKHFLNLWG PLYLSCWYSLEGWVKHKRLQLDEPFDIADGAYSRLYFEKYAMYCEEKLPPLLLNNTRKQFGLEPMVQPKAHIKLGIKLKA RLTEKVDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28317; Mature: 28317
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKIILNIVLLSVFVASLFLTISSAIDISKEVTVKLHEFDWSGVSGVMDMVMVILTFVLL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCHHHHHHHHHHHHHHHHH VGLKQGSKSIEESTRSRNAELLNWAMEEMSALKPAIRLVTDAHKREPYSQLTSDVSVDYV HHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHH STWSKEELQAAQAVSVALQRMGYFATHDLVSKKHFLNLWGPLYLSCWYSLEGWVKHKRLQ HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LDEPFDIADGAYSRLYFEKYAMYCEEKLPPLLLNNTRKQFGLEPMVQPKAHIKLGIKLKA CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHCCCCCCCCCCCEEEEEEEEE RLTEKVDI HHHHHCCC >Mature Secondary Structure MRKIILNIVLLSVFVASLFLTISSAIDISKEVTVKLHEFDWSGVSGVMDMVMVILTFVLL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCHHHHHHHHHHHHHHHHH VGLKQGSKSIEESTRSRNAELLNWAMEEMSALKPAIRLVTDAHKREPYSQLTSDVSVDYV HHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHH STWSKEELQAAQAVSVALQRMGYFATHDLVSKKHFLNLWGPLYLSCWYSLEGWVKHKRLQ HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LDEPFDIADGAYSRLYFEKYAMYCEEKLPPLLLNNTRKQFGLEPMVQPKAHIKLGIKLKA CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHCCCCCCCCCCCEEEEEEEEE RLTEKVDI HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA