| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674181
Identifier: 21674181
GI number: 21674181
Start: 1278368
End: 1279396
Strand: Direct
Name: 21674181
Synonym: CT1359
Alternate gene names: NA
Gene position: 1278368-1279396 (Clockwise)
Preceding gene: 21674180
Following gene: 21674183
Centisome position: 59.32
GC content: 57.43
Gene sequence:
>1029_bases ATGTATCCCAATATTTCGGATTGCGGCGTGATCGGTGACACGCGAACTGCCGCCCTGGTCAACTCGAACGGCTCGATCGA TTATTGTTCGCTGCCCTATTTCGACTCACCAACCGTATTCGCGGCCCTGCTTGATGAACGAAAAGGCGGATATTTCAGTC TGAAACCCGCCGAAGCTTTTTCTTCCAGGCGAGAGTACCTGCCGGACACCTGCATCCTCTGCACTTCGTTTACGACCAGA AACGGCAAGGCGGCGCTCTACGACTTCATGCCGCATCAGGATGACAAGACTCGCGAGCGCACCCAGGGTATTCACCGCTG CATCCGCGTCGATGAGGGACGCGTGAAGTTCACGCTGACGCTCAAGCTGCTCACCTTTCAGCAGACCGGAGCCATCGTCG CCGCCGCCACCACCTCGCTGCCCGAAAGCATCGGCGGAAAACGCAACTGGGACTACCGCTTCACCTGGATCCGCAACGCC TCATTCACCCTCAAGGCGTTCTTCGCGCTCAGCCACACCAGCGAAGCGGACACGTTCATCCGGTGGCTGCACGACACCTA CCGGAAAAACGGCAGCCGCGGATTCAGCCAGAAGCTGAACGCCTTCGTCCAGCGCTTCGACACGGAGATTCTCGACGCGA GCCTCCTGATCATGCCGCTCGTCGACTTTCTGCCCGTAACCGACCAACGCATCCAGGGCACAATCGAAGCCTGCCAGACG CATCTCATGGACAATGGATTCATCAGACGTTACCGTGCTGATGACGGACTCGAAGAAGATGAGGGGGGCTTTCTGCTCTG CAATTTCTGGATGATTGAGTGCCTCGCCTTGTCAGGAAAGAGCGCTGAAGCCGAAAAGCTGCTCGGTATAACGATGGCTG CGGCCAACGATCTCGGACTGTTTTCGGAAGAGTATGACCCATACAGCAGGGAGATGCTGGGCAACTTCCCACAGGCTTTC AGCCACATCGGCTACATCAACGCCGCCGCAACCCTGATCGACAGTAAACTGCCACTCGCGAATCCCTGA
Upstream 100 bases:
>100_bases GAGCGATTCGCCGTTGTAACGGCGAATCGCTCAACTTAGGAAAACATAAAGCATTTTGCGGTTATTGGCGTAAATACAGT GTTGCACTTCATCTTATGCC
Downstream 100 bases:
>100_bases TACATAAAATGGCCGGCATCCGCAGCTTATCCCCTGAACTTTGAGACTGATCTCGTCAGGAAAAGCTCGTATCGATGAGA ACAGGGACTTCACCTTGACA
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Hydrolase; Glycosyl Hydrolase Family; Glucoamylase; Glycosy Hydrolase Family Protein; Glycoside Hydrolase Family; Glycoside Hydrolase Family Protein; Trehalose-Phosphatase; Trehalose-Phosphatase/Glycoside Hydrolase; Glucoamylase-Like Glycosyl Hydrolase; Trehalose Phosphatase; Glycosyl Hydrolase Glucoamylase; Six-Hairpin Glycosidase-Like Protein; Trehalose 6-Phosphatase; Trehalose-Phosphatase/ Glycoside Hydrolase; Glucoamylase Or Related Glycosyl Hydrolase Protein; Hydrolase; Glycosyl Hydrolase Glycosyl Hydrolase Family; Glycosyl Hydrolase Protein; Trehalose-6-Phosphate Phophatase
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MYPNISDCGVIGDTRTAALVNSNGSIDYCSLPYFDSPTVFAALLDERKGGYFSLKPAEAFSSRREYLPDTCILCTSFTTR NGKAALYDFMPHQDDKTRERTQGIHRCIRVDEGRVKFTLTLKLLTFQQTGAIVAAATTSLPESIGGKRNWDYRFTWIRNA SFTLKAFFALSHTSEADTFIRWLHDTYRKNGSRGFSQKLNAFVQRFDTEILDASLLIMPLVDFLPVTDQRIQGTIEACQT HLMDNGFIRRYRADDGLEEDEGGFLLCNFWMIECLALSGKSAEAEKLLGITMAAANDLGLFSEEYDPYSREMLGNFPQAF SHIGYINAAATLIDSKLPLANP
Sequences:
>Translated_342_residues MYPNISDCGVIGDTRTAALVNSNGSIDYCSLPYFDSPTVFAALLDERKGGYFSLKPAEAFSSRREYLPDTCILCTSFTTR NGKAALYDFMPHQDDKTRERTQGIHRCIRVDEGRVKFTLTLKLLTFQQTGAIVAAATTSLPESIGGKRNWDYRFTWIRNA SFTLKAFFALSHTSEADTFIRWLHDTYRKNGSRGFSQKLNAFVQRFDTEILDASLLIMPLVDFLPVTDQRIQGTIEACQT HLMDNGFIRRYRADDGLEEDEGGFLLCNFWMIECLALSGKSAEAEKLLGITMAAANDLGLFSEEYDPYSREMLGNFPQAF SHIGYINAAATLIDSKLPLANP >Mature_342_residues MYPNISDCGVIGDTRTAALVNSNGSIDYCSLPYFDSPTVFAALLDERKGGYFSLKPAEAFSSRREYLPDTCILCTSFTTR NGKAALYDFMPHQDDKTRERTQGIHRCIRVDEGRVKFTLTLKLLTFQQTGAIVAAATTSLPESIGGKRNWDYRFTWIRNA SFTLKAFFALSHTSEADTFIRWLHDTYRKNGSRGFSQKLNAFVQRFDTEILDASLLIMPLVDFLPVTDQRIQGTIEACQT HLMDNGFIRRYRADDGLEEDEGGFLLCNFWMIECLALSGKSAEAEKLLGITMAAANDLGLFSEEYDPYSREMLGNFPQAF SHIGYINAAATLIDSKLPLANP
Specific function: Unknown
COG id: COG3387
COG function: function code G; Glucoamylase and related glycosyl hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38379; Mature: 38379
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: PS00443 GATASE_TYPE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYPNISDCGVIGDTRTAALVNSNGSIDYCSLPYFDSPTVFAALLDERKGGYFSLKPAEAF CCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEECHHHHH SSRREYLPDTCILCTSFTTRNGKAALYDFMPHQDDKTRERTQGIHRCIRVDEGRVKFTLT HHHHHHCCCEEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEE LKLLTFQQTGAIVAAATTSLPESIGGKRNWDYRFTWIRNASFTLKAFFALSHTSEADTFI EEEEEEECCCCEEEEECHHCHHHCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCHHHHH RWLHDTYRKNGSRGFSQKLNAFVQRFDTEILDASLLIMPLVDFLPVTDQRIQGTIEACQT HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH HLMDNGFIRRYRADDGLEEDEGGFLLCNFWMIECLALSGKSAEAEKLLGITMAAANDLGL HHHCCCCEEEEECCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHEEHEECCCCCCC FSEEYDPYSREMLGNFPQAFSHIGYINAAATLIDSKLPLANP CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MYPNISDCGVIGDTRTAALVNSNGSIDYCSLPYFDSPTVFAALLDERKGGYFSLKPAEAF CCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEECHHHHH SSRREYLPDTCILCTSFTTRNGKAALYDFMPHQDDKTRERTQGIHRCIRVDEGRVKFTLT HHHHHHCCCEEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEE LKLLTFQQTGAIVAAATTSLPESIGGKRNWDYRFTWIRNASFTLKAFFALSHTSEADTFI EEEEEEECCCCEEEEECHHCHHHCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCHHHHH RWLHDTYRKNGSRGFSQKLNAFVQRFDTEILDASLLIMPLVDFLPVTDQRIQGTIEACQT HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH HLMDNGFIRRYRADDGLEEDEGGFLLCNFWMIECLALSGKSAEAEKLLGITMAAANDLGL HHHCCCCEEEEECCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHEEHEECCCCCCC FSEEYDPYSREMLGNFPQAFSHIGYINAAATLIDSKLPLANP CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA