Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213693312

Identifier: 213693312

GI number: 213693312

Start: 2785427

End: 2787043

Strand: Direct

Name: 213693312

Synonym: Blon_2466

Alternate gene names: NA

Gene position: 2785427-2787043 (Clockwise)

Preceding gene: 213693311

Following gene: 213693313

Centisome position: 98.33

GC content: 61.04

Gene sequence:

>1617_bases
ATGACCAACAGCGATGGTGGGTTCCAGTTCGACTTCCAGCAGCACGAAAAGCCGGTCAGGCCAACGGTTCCTCCGATTCC
CGGGCAAGAGACGGCAGCATATAGCACGGAACCCACGGCACAGGCCACACCGGCTCTGCAGTTCCCGCAGTCTGTGCAGT
CTGTGCAGTCTGTGCAGCCGACGCAGTTTGCACAGCCCACACAGCCCGCACAGCCGACGCAGCCCATCGATCAGGCCATG
ACGCAACCGTTCTCGCCGCAATTCCCGGCTGCGGTTGCCGCACAAGCACCACAGCCGGCGGCAGCCACACAGCCAGCAGT
ATCCGAAACACCAATCGCCGCTGCGCCCGGCCAGCAGCAATACGTTTGGGATCAGGCGACGCAAAGCTTCCGCCCGGTGG
AACCGACAGCGCCGGTGACACCAGCAGCACCAGCGGCACCGGCGACATCGCCTGTTTCGGCAGCTTCAAACGCCGCGACA
CAAGCGTTCCAGCCCAATCAGGCCGAGCAGCCTGCGGTAGATGCCGAGGCAACACAGGTGTTCCAACCTGATTCAGCTGC
GGCCACACAGGCATATGGCGCATCATCCACCGTATCCGGTGAGACCGTTGCCATGCCTGCAACGCAAGTAGCGTCTGCCG
ATGATGCCGCAGCCACACAGGTGTTCCAACCGGCCGCCCTGGCCGCTTCGGCACAGGCTCAGCCTGCTGTGATGCCTCCC
TCCATTCCGTTGGCTCAGGTCTCCGATGAGGACGATTCCGATGGCGCCGAGCCTCGTCACGGCGGTAGCGGCAAAAAGAA
CACCCTCAAAATCGTCGGCATTGCCGTAGCGGTAGTCGCCGTGATAGCGCTGGTTGTCGCCGGCCTGCTCTGGTGGCATT
CCAACAGCAGTAAGGCGAGCCAAGCCGTGGCATTGGCCGAGTGCAAGGTAGCGGCCAAGCAGTACACGAATGCGCAGAAG
AAGCTCACCACCGCCATATCCAATGGCCAAACCAGCGCGCAAACATCCACCAGCGATGTGGCCGATGCCAATACGCTCAC
CACGCTGAATCAGGCGTTGCAAGACGCCGGCAACCCGGCTGACACCGCCAAGTGCGATTCCAGCCTCAACGCCACTGAGT
TGAAGTCTCACATTAAAGAGCTGCAGAATGATGCCAGCGACATGGCTGACAAGACGGATGCCATCAACAATGCGATCAAG
GCCGTTAACACTTCAAAGGCGACGGCCGATACCGACACACTGAAATCGAACCTGAGCTCGGCTATTTCGCAGGCGCAAGG
CACGCTAGATAATTCCGCGGGCAGTGTGGCCGATGAAAACACCCGCACCGCGCTGCAAAACACCATCACCGAGGCCAATA
CGGTGATGAACGGGACCAGTCCGTCCGAATCCGACGTCAACAATGCGATTTCTAAACTGCAGAAGGCCGAGTCCGACGTC
ACCGCCTCGATGCAGGCCAAGCAGCAGGCAGATGCCGCCAAGCAGGCCCAGGAGAAGGCCAAGCAGCAAGCCCGGCAGGA
GGCGCAACAACAGGCCCAGAAGAAGCCCGGCGACAACGGGACCGACAACGACAACGGCAACGGGACCGACACCAACTCCC
AACACACCGGCAACTAA

Upstream 100 bases:

>100_bases
CCTACGAGAATTTCTACCGCGCGCACATCGACGACTGAGCGTTGCGACGTACCATTCGGCCGGCGGATGCCGGCCATTTG
CTTAATCCCAAGGAGATGTC

Downstream 100 bases:

>100_bases
AATCCACGCACGCCCCACATACGGCACCGCCCATGGAGGCGGAATGGCCCGAAGCGCCGCTCTGATAGGCGACTATAGGA
AACGGCGATAACCACAGGGC

Product: sugar-binding domain protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 538; Mature: 537

Protein sequence:

>538_residues
MTNSDGGFQFDFQQHEKPVRPTVPPIPGQETAAYSTEPTAQATPALQFPQSVQSVQSVQPTQFAQPTQPAQPTQPIDQAM
TQPFSPQFPAAVAAQAPQPAAATQPAVSETPIAAAPGQQQYVWDQATQSFRPVEPTAPVTPAAPAAPATSPVSAASNAAT
QAFQPNQAEQPAVDAEATQVFQPDSAAATQAYGASSTVSGETVAMPATQVASADDAAATQVFQPAALAASAQAQPAVMPP
SIPLAQVSDEDDSDGAEPRHGGSGKKNTLKIVGIAVAVVAVIALVVAGLLWWHSNSSKASQAVALAECKVAAKQYTNAQK
KLTTAISNGQTSAQTSTSDVADANTLTTLNQALQDAGNPADTAKCDSSLNATELKSHIKELQNDASDMADKTDAINNAIK
AVNTSKATADTDTLKSNLSSAISQAQGTLDNSAGSVADENTRTALQNTITEANTVMNGTSPSESDVNNAISKLQKAESDV
TASMQAKQQADAAKQAQEKAKQQARQEAQQQAQKKPGDNGTDNDNGNGTDTNSQHTGN

Sequences:

>Translated_538_residues
MTNSDGGFQFDFQQHEKPVRPTVPPIPGQETAAYSTEPTAQATPALQFPQSVQSVQSVQPTQFAQPTQPAQPTQPIDQAM
TQPFSPQFPAAVAAQAPQPAAATQPAVSETPIAAAPGQQQYVWDQATQSFRPVEPTAPVTPAAPAAPATSPVSAASNAAT
QAFQPNQAEQPAVDAEATQVFQPDSAAATQAYGASSTVSGETVAMPATQVASADDAAATQVFQPAALAASAQAQPAVMPP
SIPLAQVSDEDDSDGAEPRHGGSGKKNTLKIVGIAVAVVAVIALVVAGLLWWHSNSSKASQAVALAECKVAAKQYTNAQK
KLTTAISNGQTSAQTSTSDVADANTLTTLNQALQDAGNPADTAKCDSSLNATELKSHIKELQNDASDMADKTDAINNAIK
AVNTSKATADTDTLKSNLSSAISQAQGTLDNSAGSVADENTRTALQNTITEANTVMNGTSPSESDVNNAISKLQKAESDV
TASMQAKQQADAAKQAQEKAKQQARQEAQQQAQKKPGDNGTDNDNGNGTDTNSQHTGN
>Mature_537_residues
TNSDGGFQFDFQQHEKPVRPTVPPIPGQETAAYSTEPTAQATPALQFPQSVQSVQSVQPTQFAQPTQPAQPTQPIDQAMT
QPFSPQFPAAVAAQAPQPAAATQPAVSETPIAAAPGQQQYVWDQATQSFRPVEPTAPVTPAAPAAPATSPVSAASNAATQ
AFQPNQAEQPAVDAEATQVFQPDSAAATQAYGASSTVSGETVAMPATQVASADDAAATQVFQPAALAASAQAQPAVMPPS
IPLAQVSDEDDSDGAEPRHGGSGKKNTLKIVGIAVAVVAVIALVVAGLLWWHSNSSKASQAVALAECKVAAKQYTNAQKK
LTTAISNGQTSAQTSTSDVADANTLTTLNQALQDAGNPADTAKCDSSLNATELKSHIKELQNDASDMADKTDAINNAIKA
VNTSKATADTDTLKSNLSSAISQAQGTLDNSAGSVADENTRTALQNTITEANTVMNGTSPSESDVNNAISKLQKAESDVT
ASMQAKQQADAAKQAQEKAKQQARQEAQQQAQKKPGDNGTDNDNGNGTDTNSQHTGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55287; Mature: 55156

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNSDGGFQFDFQQHEKPVRPTVPPIPGQETAAYSTEPTAQATPALQFPQSVQSVQSVQP
CCCCCCCEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCHHHHHHHHHCCC
TQFAQPTQPAQPTQPIDQAMTQPFSPQFPAAVAAQAPQPAAATQPAVSETPIAAAPGQQQ
HHCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH
YVWDQATQSFRPVEPTAPVTPAAPAAPATSPVSAASNAATQAFQPNQAEQPAVDAEATQV
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
FQPDSAAATQAYGASSTVSGETVAMPATQVASADDAAATQVFQPAALAASAQAQPAVMPP
CCCCCHHHHHHCCCCCCCCCCEEECCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
SIPLAQVSDEDDSDGAEPRHGGSGKKNTLKIVGIAVAVVAVIALVVAGLLWWHSNSSKAS
CCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
QAVALAECKVAAKQYTNAQKKLTTAISNGQTSAQTSTSDVADANTLTTLNQALQDAGNPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHHHHHCCCCC
DTAKCDSSLNATELKSHIKELQNDASDMADKTDAINNAIKAVNTSKATADTDTLKSNLSS
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
AISQAQGTLDNSAGSVADENTRTALQNTITEANTVMNGTSPSESDVNNAISKLQKAESDV
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
TASMQAKQQADAAKQAQEKAKQQARQEAQQQAQKKPGDNGTDNDNGNGTDTNSQHTGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TNSDGGFQFDFQQHEKPVRPTVPPIPGQETAAYSTEPTAQATPALQFPQSVQSVQSVQP
CCCCCCEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCHHHHHHHHHCCC
TQFAQPTQPAQPTQPIDQAMTQPFSPQFPAAVAAQAPQPAAATQPAVSETPIAAAPGQQQ
HHCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH
YVWDQATQSFRPVEPTAPVTPAAPAAPATSPVSAASNAATQAFQPNQAEQPAVDAEATQV
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
FQPDSAAATQAYGASSTVSGETVAMPATQVASADDAAATQVFQPAALAASAQAQPAVMPP
CCCCCHHHHHHCCCCCCCCCCEEECCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
SIPLAQVSDEDDSDGAEPRHGGSGKKNTLKIVGIAVAVVAVIALVVAGLLWWHSNSSKAS
CCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
QAVALAECKVAAKQYTNAQKKLTTAISNGQTSAQTSTSDVADANTLTTLNQALQDAGNPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHHHHHCCCCC
DTAKCDSSLNATELKSHIKELQNDASDMADKTDAINNAIKAVNTSKATADTDTLKSNLSS
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
AISQAQGTLDNSAGSVADENTRTALQNTITEANTVMNGTSPSESDVNNAISKLQKAESDV
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
TASMQAKQQADAAKQAQEKAKQQARQEAQQQAQKKPGDNGTDNDNGNGTDTNSQHTGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA