Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213691711

Identifier: 213691711

GI number: 213691711

Start: 953543

End: 954070

Strand: Reverse

Name: 213691711

Synonym: Blon_0816

Alternate gene names: NA

Gene position: 954070-953543 (Counterclockwise)

Preceding gene: 213691715

Following gene: 213691710

Centisome position: 33.68

GC content: 64.58

Gene sequence:

>528_bases
GTGTGCGCCCGCGCAGGGGCATGCTCCGATGCTCACCGCTGTGGCAGACGTCGTCATGGTTACGACCAAGGTGGCGGCGT
GCGTCGTTGGCGTCATCGGGATTTCGGCTGCTGGCGGGTCGAACTGGTCGCCATGATGCCGCGCGTGGACTGTCCCGGGT
GCGGGGTCGTGGTCGCGTCCGTGCCGTGGGCGGAACCGGGCAGCCGGTTCACGCGCGACTTCGAGTCCGAGTGCGCGTGG
CTGATGAGCGACCAAGCCAAGACGGAATTGAACCATTGGGTGTTCTGGGCGTCCCACAACCGTATCCCCGAGATAGTCGA
ACTCGCGAGGAGGATCAGGAGACGGCGCCCGGACATCCTCAGGACCATCCAACTCGGCTACTCCAACGCCAGGCTCGAGG
CGTCCGACAACCGCATCAAGGTCACCATCCGCATGGCCTACGGCTTCCACCACGTCACCAACCTCATAGCACTCGTCATG
CTCCGTTGCGGCGGACTCGACGTCCGACTCCCACAACCCGCAATCTAA

Upstream 100 bases:

>100_bases
AACAGCATATTCAACCAGCTCCTCAACGTCAAAGGCGTGGTGGTCGAGACCGTGCGGATCGTCGATTCGCCCCTGCGCCC
CGAGCCCGTGCTCGAGGTTC

Downstream 100 bases:

>100_bases
CCCACGAAAACAGCAGAAGCCTCAAAAGTAATGAGTAAATATGATAGTCTGGTCAAGTATATATGTATCCTTGACGGAGA
TAGTTTTGGCTCTTGGGTTA

Product: Transposase and inactivated derivatives-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MCARAGACSDAHRCGRRRHGYDQGGGVRRWRHRDFGCWRVELVAMMPRVDCPGCGVVVASVPWAEPGSRFTRDFESECAW
LMSDQAKTELNHWVFWASHNRIPEIVELARRIRRRRPDILRTIQLGYSNARLEASDNRIKVTIRMAYGFHHVTNLIALVM
LRCGGLDVRLPQPAI

Sequences:

>Translated_175_residues
MCARAGACSDAHRCGRRRHGYDQGGGVRRWRHRDFGCWRVELVAMMPRVDCPGCGVVVASVPWAEPGSRFTRDFESECAW
LMSDQAKTELNHWVFWASHNRIPEIVELARRIRRRRPDILRTIQLGYSNARLEASDNRIKVTIRMAYGFHHVTNLIALVM
LRCGGLDVRLPQPAI
>Mature_175_residues
MCARAGACSDAHRCGRRRHGYDQGGGVRRWRHRDFGCWRVELVAMMPRVDCPGCGVVVASVPWAEPGSRFTRDFESECAW
LMSDQAKTELNHWVFWASHNRIPEIVELARRIRRRRPDILRTIQLGYSNARLEASDNRIKVTIRMAYGFHHVTNLIALVM
LRCGGLDVRLPQPAI

Specific function: Unknown

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 20082; Mature: 20082

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCARAGACSDAHRCGRRRHGYDQGGGVRRWRHRDFGCWRVELVAMMPRVDCPGCGVVVAS
CCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCEEEEE
VPWAEPGSRFTRDFESECAWLMSDQAKTELNHWVFWASHNRIPEIVELARRIRRRRPDIL
CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCEEEEEECCCCCHHHHHHHHHHHHCCHHHH
RTIQLGYSNARLEASDNRIKVTIRMAYGFHHVTNLIALVMLRCGGLDVRLPQPAI
HHHHCCCCCCEEEECCCEEEEEEEEEHHHHHHHHHHHHHHHHCCCCEECCCCCCC
>Mature Secondary Structure
MCARAGACSDAHRCGRRRHGYDQGGGVRRWRHRDFGCWRVELVAMMPRVDCPGCGVVVAS
CCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCEEEEE
VPWAEPGSRFTRDFESECAWLMSDQAKTELNHWVFWASHNRIPEIVELARRIRRRRPDIL
CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCEEEEEECCCCCHHHHHHHHHHHHCCHHHH
RTIQLGYSNARLEASDNRIKVTIRMAYGFHHVTNLIALVMLRCGGLDVRLPQPAI
HHHHCCCCCCEEEECCCEEEEEEEEEHHHHHHHHHHHHHHHHCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]