| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691710
Identifier: 213691710
GI number: 213691710
Start: 951766
End: 953073
Strand: Reverse
Name: 213691710
Synonym: Blon_0815
Alternate gene names: NA
Gene position: 953073-951766 (Counterclockwise)
Preceding gene: 213691711
Following gene: 213691709
Centisome position: 33.64
GC content: 43.58
Gene sequence:
>1308_bases ATGGCTGAAATTAAGAGCGTAAATGAACTGTTGAGCATGAATCTGAATATTCCGGACTATCAAAGGCCGTACAAGTGGGA TATTCAAAACATCGACGATTTATTCCTAGACATCACCAATGCAATTAGTGATGCGGACAGATACAGAACTGAGTTCAAAT ACCGTATCGGAACGATCATCCTGCACAGAACAAAGAATGACACCTACGATGTGGTGGATGGGCAGCAGAGAATCATTTCT CTGGTGCTTCTAAAGCAATGCCTTGAACCGGGATTTGAGTGTTCGATTCTCCAGATAGATTTCACCAACAAGGTGAGCCA GTTCAACATTCACAGGAACTATGCGTTTATCAGAGAGTGGTTCTCCCTAAAGAGCGAAGATGTAAAACGGGACTTTATCC ATGCCTTTGAGCATATTTTAGAGGTCGTCGTTGTTTGCGTAGACAAAGTAACCGAAGCGTTCCAGCTTTTCGATTCACAA AATACAAGAGGTAAGGCATTAGACCCGCATGACCTTCTGAAAGCGTACCACCTCCGTGAAATGAAAAAGTATCCCTATGA AATGGAACACGCTGTTACAAAATGGGAAGCAAAGGATACTGAGAAGATCAAAGAGCTGTTTGATCTATATTTGTTTCCAA TCTTGAATTGGAGCCGAGGCATTAAAAGCAAACCGTTCATAGCCAAGGAAATCGACACCTATAAAGGTATCGCAGAAAGC TCAACCTATTCTTACGCACGACGGGCAAGCCGAGCTATGCCGTATTTCCAGATTACCGAGCCATTTATTTCCGGCAACGA CTTCTTTGAAATGGTCGAGCATTATATGTATCTGCTCCAGGATATTAAGTCGGAGATCTGCAACAATCCCCGTTTCAAGG AGATTAAGCTGGTTATCTGCGGCGGCAAGGATGTAGAAACACCGGAAGAAATGGACAAAGTAAAGTTCGGCTCTGCCGGT TTCGGATACACGAAGAATCTGTTTTATTGTGCGCTGCTTTGCTATTACGACAAGTTCCATAACTTCGATGAAATGGCAGT CAAGAAGCTATTTTCCTGGGCGTTTATGCTCCGTGTAGATATGAAGACCCTGGGGTTTGACAGCGTAAACAAGTACGCTA TCGGTGACGAAAATTCCAGATATACAAACACAATCGGTATTTTCTCCAAGATCAGCTTTGCCCGGATGCACCACGAAATA TCCGGATTGCAGATAAAGGTACGGAGAGGACCGGACAGCCCATCCAATAGGATAGACTTGTTGTATGACACGATCAAAGA AATCAATGGATATGGAGGTGCGGAATGA
Upstream 100 bases:
>100_bases GGTGCTTTGCTTGGATTTTTCAAAGATGGCAGTATCCGGAAATGGCTGGAGCGACTGAAAGAACTTGATAATGGCAGCGG AACCGAGGTGAGATAAAGGC
Downstream 100 bases:
>100_bases GCAAATTAGTAACTGAACTTCATATTATTGGTGAAAACGGCAATATGTTCGACACAGATATGGAGTACATAATCCCTCTA TACCAGAGAGCCTATGCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MAEIKSVNELLSMNLNIPDYQRPYKWDIQNIDDLFLDITNAISDADRYRTEFKYRIGTIILHRTKNDTYDVVDGQQRIIS LVLLKQCLEPGFECSILQIDFTNKVSQFNIHRNYAFIREWFSLKSEDVKRDFIHAFEHILEVVVVCVDKVTEAFQLFDSQ NTRGKALDPHDLLKAYHLREMKKYPYEMEHAVTKWEAKDTEKIKELFDLYLFPILNWSRGIKSKPFIAKEIDTYKGIAES STYSYARRASRAMPYFQITEPFISGNDFFEMVEHYMYLLQDIKSEICNNPRFKEIKLVICGGKDVETPEEMDKVKFGSAG FGYTKNLFYCALLCYYDKFHNFDEMAVKKLFSWAFMLRVDMKTLGFDSVNKYAIGDENSRYTNTIGIFSKISFARMHHEI SGLQIKVRRGPDSPSNRIDLLYDTIKEINGYGGAE
Sequences:
>Translated_435_residues MAEIKSVNELLSMNLNIPDYQRPYKWDIQNIDDLFLDITNAISDADRYRTEFKYRIGTIILHRTKNDTYDVVDGQQRIIS LVLLKQCLEPGFECSILQIDFTNKVSQFNIHRNYAFIREWFSLKSEDVKRDFIHAFEHILEVVVVCVDKVTEAFQLFDSQ NTRGKALDPHDLLKAYHLREMKKYPYEMEHAVTKWEAKDTEKIKELFDLYLFPILNWSRGIKSKPFIAKEIDTYKGIAES STYSYARRASRAMPYFQITEPFISGNDFFEMVEHYMYLLQDIKSEICNNPRFKEIKLVICGGKDVETPEEMDKVKFGSAG FGYTKNLFYCALLCYYDKFHNFDEMAVKKLFSWAFMLRVDMKTLGFDSVNKYAIGDENSRYTNTIGIFSKISFARMHHEI SGLQIKVRRGPDSPSNRIDLLYDTIKEINGYGGAE >Mature_434_residues AEIKSVNELLSMNLNIPDYQRPYKWDIQNIDDLFLDITNAISDADRYRTEFKYRIGTIILHRTKNDTYDVVDGQQRIISL VLLKQCLEPGFECSILQIDFTNKVSQFNIHRNYAFIREWFSLKSEDVKRDFIHAFEHILEVVVVCVDKVTEAFQLFDSQN TRGKALDPHDLLKAYHLREMKKYPYEMEHAVTKWEAKDTEKIKELFDLYLFPILNWSRGIKSKPFIAKEIDTYKGIAESS TYSYARRASRAMPYFQITEPFISGNDFFEMVEHYMYLLQDIKSEICNNPRFKEIKLVICGGKDVETPEEMDKVKFGSAGF GYTKNLFYCALLCYYDKFHNFDEMAVKKLFSWAFMLRVDMKTLGFDSVNKYAIGDENSRYTNTIGIFSKISFARMHHEIS GLQIKVRRGPDSPSNRIDLLYDTIKEINGYGGAE
Specific function: Unknown
COG id: COG1479
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50990; Mature: 50859
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEIKSVNELLSMNLNIPDYQRPYKWDIQNIDDLFLDITNAISDADRYRTEFKYRIGTII CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE LHRTKNDTYDVVDGQQRIISLVLLKQCLEPGFECSILQIDFTNKVSQFNIHRNYAFIREW EEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHEEEHHHHHHHHHH FSLKSEDVKRDFIHAFEHILEVVVVCVDKVTEAFQLFDSQNTRGKALDPHDLLKAYHLRE HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH MKKYPYEMEHAVTKWEAKDTEKIKELFDLYLFPILNWSRGIKSKPFIAKEIDTYKGIAES HHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC STYSYARRASRAMPYFQITEPFISGNDFFEMVEHYMYLLQDIKSEICNNPRFKEIKLVIC HHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEE GGKDVETPEEMDKVKFGSAGFGYTKNLFYCALLCYYDKFHNFDEMAVKKLFSWAFMLRVD CCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH MKTLGFDSVNKYAIGDENSRYTNTIGIFSKISFARMHHEISGLQIKVRRGPDSPSNRIDL HHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHH LYDTIKEINGYGGAE HHHHHHHHCCCCCCC >Mature Secondary Structure AEIKSVNELLSMNLNIPDYQRPYKWDIQNIDDLFLDITNAISDADRYRTEFKYRIGTII CCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE LHRTKNDTYDVVDGQQRIISLVLLKQCLEPGFECSILQIDFTNKVSQFNIHRNYAFIREW EEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHEEEHHHHHHHHHH FSLKSEDVKRDFIHAFEHILEVVVVCVDKVTEAFQLFDSQNTRGKALDPHDLLKAYHLRE HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH MKKYPYEMEHAVTKWEAKDTEKIKELFDLYLFPILNWSRGIKSKPFIAKEIDTYKGIAES HHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC STYSYARRASRAMPYFQITEPFISGNDFFEMVEHYMYLLQDIKSEICNNPRFKEIKLVIC HHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEE GGKDVETPEEMDKVKFGSAGFGYTKNLFYCALLCYYDKFHNFDEMAVKKLFSWAFMLRVD CCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH MKTLGFDSVNKYAIGDENSRYTNTIGIFSKISFARMHHEISGLQIKVRRGPDSPSNRIDL HHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHH LYDTIKEINGYGGAE HHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA