Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

Click here to switch to the map view.

The map label for this gene is uxaC [H]

Identifier: 213691567

GI number: 213691567

Start: 773370

End: 774800

Strand: Reverse

Name: uxaC [H]

Synonym: Blon_0669

Alternate gene names: 213691567

Gene position: 774800-773370 (Counterclockwise)

Preceding gene: 213691568

Following gene: 213691566

Centisome position: 27.35

GC content: 57.86

Gene sequence:

>1431_bases
ATGGTATCCGCGCTCAATGAAGATCGCCTATTCCCAACGGATCCGGAACAACGTTTAATCGCACGTCGACTGTACGAGGC
AATCAAGGATCGTCCCATCATCTCCCCTCACGGACACGTCCCTATCGACTGGTTCGCGGAAGACAAGCATTTCAAGAACC
CCACCGATCTATTCATCACTCCTGATCACTACGTGACCCGTATCATGCACGGACATAGTGTTCCTTTCAGCGAGCTGGGT
GTGGGCCAGAAGAACTTCACCGAAGAACAATCTCGCAACGCCTTCCGCCTCCTTGGAAAGTACTGGTATGCCTATGCTGG
CACGCCGATGCGTTACTGGATGGAGGATTCGCTGTCCAATGTGTTCGGCATCAACAAGCCACTCAATGAAGACACCGCAG
ACAGCATCTACGATGAGCTCAACGAGCTCCTTGCCTCCGACGATTTCACCACCCGCAAGCTTGTGAAGCGTTTCAACATC
GGCTTCATCTCCACCACCGATGACCCCACCGATGACCTGGTCCTGCACGATAAGGTGCGCGCCGACGCCAATTTCCCGGC
GCGTCTTGCACCGTGTTTCCGTCCGGATCGCTACCTTGCGGTCGATCGTGTGGATTGGGCTCAGCTCTGCGACCAGCTGG
GTGAATCGGCTGGCGTAAACACCGCCACTTATGAAGGATTCGTAGAGGCCATGCGCCGTCGTCGTCTGTTCTTCAAGCAG
CATGGCGCAGTCGCCGCCGATTACGGTGTGGATCCTTCGCTTGACGAAGTCAATTGGTCCGGCGACACCACACGCCTGTC
GGATGATGTGGCGATTCGCTTGTACACCAAGGCTCGTAGTGGCAGCCTGACTTCCGATGAGGCACGCAAGCTGCACGCCC
ATCTGCTCAACGACCAGGCAAAGCTCGCGCAGGACGACGGTCTGGTAATGACCTTGCACCCCGGCGTGATGCGCAACCAC
TACCGCAAGCAGCTCGTCAACTACGGTCCGGACTGTGGAGCGGATTGCCCGATGCCGGCTGATTGGGCTCACTGGCTGCG
CCCCATGCTCAACGAATACGGCGAGAATCCTGATTTCCACCTTGTGGCATTCACCATGGATGAGACCGCATACTCCCGCG
AGCTCGCTCCAATGGCGGCATACTACCCGGCGCTGTACATCGGAGCCCCGTGGTGGTTCCTGGATGCGCCTGAGCCGATT
CTGCGCTACTACGAGGATGTCGTTCCGTACGCTGGTTTCGCCAAGCTGTCGGGATTCATCGATGACACCCGTGCGCTGTG
CTCCATCCCCGCCCGCCACGACATGAACCGTCGTCTGACCGCACGTTACATCTCCGGTCTGGTCGCCGACCACCGGTTGA
GTTATGAGGAAGGCGAGCAGATCGCCATTCGTTCCGTGGACGGTCAGCCTTCTGACGTGTTCAAGCTCTGA

Upstream 100 bases:

>100_bases
ACCCCGATCGCGTCCACCTCGACGAATCGCAATATCAGGAATTGGCGAAAGCCATCATCCAGCATCTGTGAATAAGCCTC
TATTTTAAGGAGTAGTTACA

Downstream 100 bases:

>100_bases
CTCGAACGACCTTTTATTGATTTCAAGGAGTAAATATGACTGATACACATGATTTCACGTCATTGCCCAGATTGAACCGC
GCAGAGCACGGCCGCGCCGC

Product: Glucuronate isomerase

Products: NA

Alternate protein names: Glucuronate isomerase; Uronic isomerase [H]

Number of amino acids: Translated: 476; Mature: 476

Protein sequence:

>476_residues
MVSALNEDRLFPTDPEQRLIARRLYEAIKDRPIISPHGHVPIDWFAEDKHFKNPTDLFITPDHYVTRIMHGHSVPFSELG
VGQKNFTEEQSRNAFRLLGKYWYAYAGTPMRYWMEDSLSNVFGINKPLNEDTADSIYDELNELLASDDFTTRKLVKRFNI
GFISTTDDPTDDLVLHDKVRADANFPARLAPCFRPDRYLAVDRVDWAQLCDQLGESAGVNTATYEGFVEAMRRRRLFFKQ
HGAVAADYGVDPSLDEVNWSGDTTRLSDDVAIRLYTKARSGSLTSDEARKLHAHLLNDQAKLAQDDGLVMTLHPGVMRNH
YRKQLVNYGPDCGADCPMPADWAHWLRPMLNEYGENPDFHLVAFTMDETAYSRELAPMAAYYPALYIGAPWWFLDAPEPI
LRYYEDVVPYAGFAKLSGFIDDTRALCSIPARHDMNRRLTARYISGLVADHRLSYEEGEQIAIRSVDGQPSDVFKL

Sequences:

>Translated_476_residues
MVSALNEDRLFPTDPEQRLIARRLYEAIKDRPIISPHGHVPIDWFAEDKHFKNPTDLFITPDHYVTRIMHGHSVPFSELG
VGQKNFTEEQSRNAFRLLGKYWYAYAGTPMRYWMEDSLSNVFGINKPLNEDTADSIYDELNELLASDDFTTRKLVKRFNI
GFISTTDDPTDDLVLHDKVRADANFPARLAPCFRPDRYLAVDRVDWAQLCDQLGESAGVNTATYEGFVEAMRRRRLFFKQ
HGAVAADYGVDPSLDEVNWSGDTTRLSDDVAIRLYTKARSGSLTSDEARKLHAHLLNDQAKLAQDDGLVMTLHPGVMRNH
YRKQLVNYGPDCGADCPMPADWAHWLRPMLNEYGENPDFHLVAFTMDETAYSRELAPMAAYYPALYIGAPWWFLDAPEPI
LRYYEDVVPYAGFAKLSGFIDDTRALCSIPARHDMNRRLTARYISGLVADHRLSYEEGEQIAIRSVDGQPSDVFKL
>Mature_476_residues
MVSALNEDRLFPTDPEQRLIARRLYEAIKDRPIISPHGHVPIDWFAEDKHFKNPTDLFITPDHYVTRIMHGHSVPFSELG
VGQKNFTEEQSRNAFRLLGKYWYAYAGTPMRYWMEDSLSNVFGINKPLNEDTADSIYDELNELLASDDFTTRKLVKRFNI
GFISTTDDPTDDLVLHDKVRADANFPARLAPCFRPDRYLAVDRVDWAQLCDQLGESAGVNTATYEGFVEAMRRRRLFFKQ
HGAVAADYGVDPSLDEVNWSGDTTRLSDDVAIRLYTKARSGSLTSDEARKLHAHLLNDQAKLAQDDGLVMTLHPGVMRNH
YRKQLVNYGPDCGADCPMPADWAHWLRPMLNEYGENPDFHLVAFTMDETAYSRELAPMAAYYPALYIGAPWWFLDAPEPI
LRYYEDVVPYAGFAKLSGFIDDTRALCSIPARHDMNRRLTARYISGLVADHRLSYEEGEQIAIRSVDGQPSDVFKL

Specific function: Hexuronate conversion to KDG. [C]

COG id: COG1904

COG function: function code G; Glucuronate isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the uronate isomerase family [H]

Homologues:

Organism=Escherichia coli, GI2367192, Length=476, Percent_Identity=27.7310924369748, Blast_Score=158, Evalue=9e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003766
- InterPro:   IPR023177 [H]

Pfam domain/function: PF02614 UxaC [H]

EC number: =5.3.1.12 [H]

Molecular weight: Translated: 54362; Mature: 54362

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSALNEDRLFPTDPEQRLIARRLYEAIKDRPIISPHGHVPIDWFAEDKHFKNPTDLFIT
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCEEEC
PDHYVTRIMHGHSVPFSELGVGQKNFTEEQSRNAFRLLGKYWYAYAGTPMRYWMEDSLSN
CHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VFGINKPLNEDTADSIYDELNELLASDDFTTRKLVKRFNIGFISTTDDPTDDLVLHDKVR
HHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCCCCCEEEEHHHC
ADANFPARLAPCFRPDRYLAVDRVDWAQLCDQLGESAGVNTATYEGFVEAMRRRRLFFKQ
CCCCCCCHHCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
HGAVAADYGVDPSLDEVNWSGDTTRLSDDVAIRLYTKARSGSLTSDEARKLHAHLLNDQA
CCCEEECCCCCCCCCCCCCCCCCCEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCHH
KLAQDDGLVMTLHPGVMRNHYRKQLVNYGPDCGADCPMPADWAHWLRPMLNEYGENPDFH
HHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEE
LVAFTMDETAYSRELAPMAAYYPALYIGAPWWFLDAPEPILRYYEDVVPYAGFAKLSGFI
EEEEEECCHHHHHHHHHHHHHHCCCEECCCEEECCCCHHHHHHHHHHCCCCCHHHHHHHH
DDTRALCSIPARHDMNRRLTARYISGLVADHRLSYEEGEQIAIRSVDGQPSDVFKL
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHCCC
>Mature Secondary Structure
MVSALNEDRLFPTDPEQRLIARRLYEAIKDRPIISPHGHVPIDWFAEDKHFKNPTDLFIT
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCEEEC
PDHYVTRIMHGHSVPFSELGVGQKNFTEEQSRNAFRLLGKYWYAYAGTPMRYWMEDSLSN
CHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VFGINKPLNEDTADSIYDELNELLASDDFTTRKLVKRFNIGFISTTDDPTDDLVLHDKVR
HHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCCCCCEEEEHHHC
ADANFPARLAPCFRPDRYLAVDRVDWAQLCDQLGESAGVNTATYEGFVEAMRRRRLFFKQ
CCCCCCCHHCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
HGAVAADYGVDPSLDEVNWSGDTTRLSDDVAIRLYTKARSGSLTSDEARKLHAHLLNDQA
CCCEEECCCCCCCCCCCCCCCCCCEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCHH
KLAQDDGLVMTLHPGVMRNHYRKQLVNYGPDCGADCPMPADWAHWLRPMLNEYGENPDFH
HHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEE
LVAFTMDETAYSRELAPMAAYYPALYIGAPWWFLDAPEPILRYYEDVVPYAGFAKLSGFI
EEEEEECCHHHHHHHHHHHHHHCCCEECCCEEECCCCHHHHHHHHHHCCCCCHHHHHHHH
DDTRALCSIPARHDMNRRLTARYISGLVADHRLSYEEGEQIAIRSVDGQPSDVFKL
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA