| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is guaB [H]
Identifier: 213691487
GI number: 213691487
Start: 659678
End: 661231
Strand: Direct
Name: guaB [H]
Synonym: Blon_0584
Alternate gene names: 213691487
Gene position: 659678-661231 (Clockwise)
Preceding gene: 213691486
Following gene: 213691488
Centisome position: 23.29
GC content: 64.03
Gene sequence:
>1554_bases ATGGCTACAAACCTTGATGAATTGAACGCCCAGTCGGCGTATGCTCCCCTTCCCCCGATTTTCGCCAAGCTCGGCCTTGC CTATGATGATGTGTTGCTGCTGCCGAACGAGACGGATGTCATTCCTTCCGAAGTGGACACCAGCACTCATCTGACCCGCG AGATCGTGATGAAGGCCCCGGTCCTCTCCGCTGCCATGGATACTGTGACCGAGTCCGAGATGGCCATCGCCATGGCCCGT AACGGCGGCATCGGCGTGCTGCACCGCAACCTGTCCATCGACGACCAGGCCGCTCAGGTCGACGTGGTCAAGCGTTCCGA GTCCGGTATGATCACCGACCCGCTGACCGTCAGCCCCGAGGTCACGCTGGCCGATCTCGACAAGCTGTGCGGCAAGTTCC ACATCTCCGGTCTGCCGGTTGTGGACAAGGACAACAAGCTCGTCGGCATCATCACCAACCGTGACATGCGCTTCATCGCC TCCGATGATTACGACACCCTGAAGGTCAAGGATGTCATGACCAAGGAGAACCTGGTCACTGGTCCGTCCAACATCTCCAA GGATGACGCCCACCGTCTGCTCGCCCAGCACAAGGTCGAGAAGCTGCCGCTGGTCGATGACGAAGGCCGCCTGACCGGTC TGATCACCGTCAAGGACTTCGTCAAGACCGAGCAGTACCCGGACGCCACCAAGGATGAGCAGGGCCGTCTGCGCGTGGCC GCCGGTGTCGGCTTCCTCGGCGACGCCTGGCAGCGTGCCTCCGCTCTGATGGAGGCCGGCGTGGACGTGCTCGTGGTCGA CACCGCCAACGGTGAGGCCCGTCTGGCGCTCGACATGATTTCCCGCCTGAAGCACGACTCCGCCTTCGATGGCGTGCAGA TCATCGGCGGCAACGTGGGCACCCGTTCCGGCGCCCAGGCCATGATTGAGGCTGGCGCGGACGCCGTCAAGGTCGGTATC GGCCCCGGCTCCATCTGCACCACCCGTATCGTTGCCGGTGTCGGTGTCCCGCAGCTCACCGCCGTGTACGAGGCCGCTCA GGCCTGCCGTGCTGCGGGCATCCCCTGCATCGCCGACGGTGGCATCCACTATTCCGGTGACATCGCCAAGGCCCTCGTGG CTGGCGCCTCCTCCGTGATGCTCGGCGGCGCGCTCGCCGGCTGTGAGGAAGCCCCGGGCGAGAAGGTGCTCCTGCACGGC AAGCAGTACAAGCTGTACCGTGGCATGGGCTCCCTCGGTGCCATGGCCCCGCGCGGCAAGAAGTCCTACTCCAAGGACCG CTACTTCCAGGCCGACGTGACCTCCAGCGACAAGGTCGTGCCGGAAGGCGTGGAAGGCGAAGTGCCGTATCGCGGCCCGC TGAACGCCGTGCTCTACCAGATGCTCGGTGGCCTGCACCAGTCCATGTTCTACATCGGCGCCCACAACATCGCCGAGATG CCGGAGCGTGGCAAGTTCATCCGCATCACCGATGCCGGTCTGCGCGAATCGCACCCGCACGATATCGTGATGACCGCCGA AGCCCCGAACTACTCCGGCTTCCACAACAACTGA
Upstream 100 bases:
>100_bases CGGGACTCGCAGGTGGGTGAGGTGCAGGACCCGGCAGCGGATAAGTGAGCGCTCACAAGCGTGTGTCGTGAAGGTCAGCG CATTTTCATATAGTGTTTAC
Downstream 100 bases:
>100_bases TCGGTTGATGCCCGCTAGCTTGCGCTAGTTAGGGGTTGATTCCTTGTGAAAAGGGTCTGCTTATGCAGGCCCTTTTCGCG TATGTGGCTCGAGATAGCTT
Product: inosine-5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 517; Mature: 516
Protein sequence:
>517_residues MATNLDELNAQSAYAPLPPIFAKLGLAYDDVLLLPNETDVIPSEVDTSTHLTREIVMKAPVLSAAMDTVTESEMAIAMAR NGGIGVLHRNLSIDDQAAQVDVVKRSESGMITDPLTVSPEVTLADLDKLCGKFHISGLPVVDKDNKLVGIITNRDMRFIA SDDYDTLKVKDVMTKENLVTGPSNISKDDAHRLLAQHKVEKLPLVDDEGRLTGLITVKDFVKTEQYPDATKDEQGRLRVA AGVGFLGDAWQRASALMEAGVDVLVVDTANGEARLALDMISRLKHDSAFDGVQIIGGNVGTRSGAQAMIEAGADAVKVGI GPGSICTTRIVAGVGVPQLTAVYEAAQACRAAGIPCIADGGIHYSGDIAKALVAGASSVMLGGALAGCEEAPGEKVLLHG KQYKLYRGMGSLGAMAPRGKKSYSKDRYFQADVTSSDKVVPEGVEGEVPYRGPLNAVLYQMLGGLHQSMFYIGAHNIAEM PERGKFIRITDAGLRESHPHDIVMTAEAPNYSGFHNN
Sequences:
>Translated_517_residues MATNLDELNAQSAYAPLPPIFAKLGLAYDDVLLLPNETDVIPSEVDTSTHLTREIVMKAPVLSAAMDTVTESEMAIAMAR NGGIGVLHRNLSIDDQAAQVDVVKRSESGMITDPLTVSPEVTLADLDKLCGKFHISGLPVVDKDNKLVGIITNRDMRFIA SDDYDTLKVKDVMTKENLVTGPSNISKDDAHRLLAQHKVEKLPLVDDEGRLTGLITVKDFVKTEQYPDATKDEQGRLRVA AGVGFLGDAWQRASALMEAGVDVLVVDTANGEARLALDMISRLKHDSAFDGVQIIGGNVGTRSGAQAMIEAGADAVKVGI GPGSICTTRIVAGVGVPQLTAVYEAAQACRAAGIPCIADGGIHYSGDIAKALVAGASSVMLGGALAGCEEAPGEKVLLHG KQYKLYRGMGSLGAMAPRGKKSYSKDRYFQADVTSSDKVVPEGVEGEVPYRGPLNAVLYQMLGGLHQSMFYIGAHNIAEM PERGKFIRITDAGLRESHPHDIVMTAEAPNYSGFHNN >Mature_516_residues ATNLDELNAQSAYAPLPPIFAKLGLAYDDVLLLPNETDVIPSEVDTSTHLTREIVMKAPVLSAAMDTVTESEMAIAMARN GGIGVLHRNLSIDDQAAQVDVVKRSESGMITDPLTVSPEVTLADLDKLCGKFHISGLPVVDKDNKLVGIITNRDMRFIAS DDYDTLKVKDVMTKENLVTGPSNISKDDAHRLLAQHKVEKLPLVDDEGRLTGLITVKDFVKTEQYPDATKDEQGRLRVAA GVGFLGDAWQRASALMEAGVDVLVVDTANGEARLALDMISRLKHDSAFDGVQIIGGNVGTRSGAQAMIEAGADAVKVGIG PGSICTTRIVAGVGVPQLTAVYEAAQACRAAGIPCIADGGIHYSGDIAKALVAGASSVMLGGALAGCEEAPGEKVLLHGK QYKLYRGMGSLGAMAPRGKKSYSKDRYFQADVTSSDKVVPEGVEGEVPYRGPLNAVLYQMLGGLHQSMFYIGAHNIAEMP ERGKFIRITDAGLRESHPHDIVMTAEAPNYSGFHNN
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI34328928, Length=478, Percent_Identity=41.2133891213389, Blast_Score=331, Evalue=1e-90, Organism=Homo sapiens, GI34328930, Length=478, Percent_Identity=41.2133891213389, Blast_Score=331, Evalue=1e-90, Organism=Homo sapiens, GI217035146, Length=478, Percent_Identity=41.2133891213389, Blast_Score=331, Evalue=1e-90, Organism=Homo sapiens, GI156616279, Length=478, Percent_Identity=41.2133891213389, Blast_Score=331, Evalue=1e-90, Organism=Homo sapiens, GI66933016, Length=461, Percent_Identity=40.5639913232104, Blast_Score=329, Evalue=5e-90, Organism=Homo sapiens, GI217035152, Length=454, Percent_Identity=41.6299559471366, Blast_Score=323, Evalue=4e-88, Organism=Homo sapiens, GI217035148, Length=478, Percent_Identity=40.5857740585774, Blast_Score=321, Evalue=9e-88, Organism=Homo sapiens, GI217035150, Length=478, Percent_Identity=38.9121338912134, Blast_Score=299, Evalue=4e-81, Organism=Homo sapiens, GI50541954, Length=273, Percent_Identity=35.8974358974359, Blast_Score=149, Evalue=9e-36, Organism=Homo sapiens, GI50541952, Length=273, Percent_Identity=35.8974358974359, Blast_Score=149, Evalue=9e-36, Organism=Homo sapiens, GI50541948, Length=273, Percent_Identity=35.8974358974359, Blast_Score=149, Evalue=9e-36, Organism=Homo sapiens, GI50541956, Length=274, Percent_Identity=35.7664233576642, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI156104880, Length=266, Percent_Identity=35.3383458646617, Blast_Score=144, Evalue=2e-34, Organism=Escherichia coli, GI1788855, Length=492, Percent_Identity=51.4227642276423, Blast_Score=439, Evalue=1e-124, Organism=Escherichia coli, GI1786293, Length=231, Percent_Identity=38.0952380952381, Blast_Score=145, Evalue=7e-36, Organism=Caenorhabditis elegans, GI71994385, Length=482, Percent_Identity=37.7593360995851, Blast_Score=287, Evalue=1e-77, Organism=Caenorhabditis elegans, GI71994389, Length=434, Percent_Identity=39.63133640553, Blast_Score=276, Evalue=2e-74, Organism=Caenorhabditis elegans, GI17560440, Length=264, Percent_Identity=35.9848484848485, Blast_Score=154, Evalue=9e-38, Organism=Saccharomyces cerevisiae, GI6322012, Length=470, Percent_Identity=40.2127659574468, Blast_Score=327, Evalue=2e-90, Organism=Saccharomyces cerevisiae, GI6323585, Length=464, Percent_Identity=40.7327586206897, Blast_Score=326, Evalue=6e-90, Organism=Saccharomyces cerevisiae, GI6323464, Length=464, Percent_Identity=41.5948275862069, Blast_Score=324, Evalue=2e-89, Organism=Saccharomyces cerevisiae, GI6319352, Length=347, Percent_Identity=40.0576368876081, Blast_Score=249, Evalue=8e-67, Organism=Saccharomyces cerevisiae, GI6319353, Length=117, Percent_Identity=41.8803418803419, Blast_Score=76, Evalue=1e-14, Organism=Drosophila melanogaster, GI24641071, Length=487, Percent_Identity=39.0143737166324, Blast_Score=320, Evalue=2e-87, Organism=Drosophila melanogaster, GI24641073, Length=487, Percent_Identity=39.0143737166324, Blast_Score=320, Evalue=2e-87, Organism=Drosophila melanogaster, GI28571163, Length=446, Percent_Identity=38.7892376681614, Blast_Score=281, Evalue=5e-76,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 54978; Mature: 54847
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATNLDELNAQSAYAPLPPIFAKLGLAYDDVLLLPNETDVIPSEVDTSTHLTREIVMKAP CCCCCHHCCCCCCCCCCCHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCH VLSAAMDTVTESEMAIAMARNGGIGVLHRNLSIDDQAAQVDVVKRSESGMITDPLTVSPE HHHHHHHHHHHHHEEEEEECCCCEEEEEECCCCCCCHHEEEEEEECCCCCEECCEECCCC VTLADLDKLCGKFHISGLPVVDKDNKLVGIITNRDMRFIASDDYDTLKVKDVMTKENLVT CCHHHHHHHHHHEECCCCCEECCCCCEEEEEECCCEEEEECCCCCEEEEHHHHHHCCEEC GPSNISKDDAHRLLAQHKVEKLPLVDDEGRLTGLITVKDFVKTEQYPDATKDEQGRLRVA CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHCCCCCCCCCCCCCCEEEE AGVGFLGDAWQRASALMEAGVDVLVVDTANGEARLALDMISRLKHDSAFDGVQIIGGNVG ECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHCCCCCCCCEEEECCCCC TRSGAQAMIEAGADAVKVGIGPGSICTTRIVAGVGVPQLTAVYEAAQACRAAGIPCIADG CCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEECC GIHYSGDIAKALVAGASSVMLGGALAGCEEAPGEKVLLHGKQYKLYRGMGSLGAMAPRGK CEEECCHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEECCEEEEHHCCCCCCCCCCCCC KSYSKDRYFQADVTSSDKVVPEGVEGEVPYRGPLNAVLYQMLGGLHQSMFYIGAHNIAEM CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCHHCC PERGKFIRITDAGLRESHPHDIVMTAEAPNYSGFHNN CCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCC >Mature Secondary Structure ATNLDELNAQSAYAPLPPIFAKLGLAYDDVLLLPNETDVIPSEVDTSTHLTREIVMKAP CCCCHHCCCCCCCCCCCHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCH VLSAAMDTVTESEMAIAMARNGGIGVLHRNLSIDDQAAQVDVVKRSESGMITDPLTVSPE HHHHHHHHHHHHHEEEEEECCCCEEEEEECCCCCCCHHEEEEEEECCCCCEECCEECCCC VTLADLDKLCGKFHISGLPVVDKDNKLVGIITNRDMRFIASDDYDTLKVKDVMTKENLVT CCHHHHHHHHHHEECCCCCEECCCCCEEEEEECCCEEEEECCCCCEEEEHHHHHHCCEEC GPSNISKDDAHRLLAQHKVEKLPLVDDEGRLTGLITVKDFVKTEQYPDATKDEQGRLRVA CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHCCCCCCCCCCCCCCEEEE AGVGFLGDAWQRASALMEAGVDVLVVDTANGEARLALDMISRLKHDSAFDGVQIIGGNVG ECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHCCCCCCCCEEEECCCCC TRSGAQAMIEAGADAVKVGIGPGSICTTRIVAGVGVPQLTAVYEAAQACRAAGIPCIADG CCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEECC GIHYSGDIAKALVAGASSVMLGGALAGCEEAPGEKVLLHGKQYKLYRGMGSLGAMAPRGK CEEECCHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEECCEEEEHHCCCCCCCCCCCCC KSYSKDRYFQADVTSSDKVVPEGVEGEVPYRGPLNAVLYQMLGGLHQSMFYIGAHNIAEM CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCHHCC PERGKFIRITDAGLRESHPHDIVMTAEAPNYSGFHNN CCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]