Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

Click here to switch to the map view.

The map label for this gene is 21241112

Identifier: 21241112

GI number: 21241112

Start: 403716

End: 405365

Strand: Reverse

Name: 21241112

Synonym: XAC0338

Alternate gene names: NA

Gene position: 405365-403716 (Counterclockwise)

Preceding gene: 21241113

Following gene: 21241111

Centisome position: 7.83

GC content: 64.85

Gene sequence:

>1650_bases
GTGACACAAGGGCGCGACAGCGAGGTTCGGCAGTGTCACCAAACTGACATCAAATCTAAATATAACTGCTGCCATTGCCG
CTACGTCAGGACGACCGGCGCCTGGCAGGCGCTTCCACGCCGTGCAGCCGCCCTCTTGGCAGCACCGGATCGACGCAGCC
GCCGACCCGTTTCCCTTGCACGAGCCGGACCAATGAAAAAACGCAATCTCGCCACTGTTCTGTGCGCCCTCAGCGCGACC
GCCAGCGGCAGCACGCTGGCCGCCGAGCTGGAGTTGTACGTCGACCGCAAGACCAAGCAGATCTTCGCCGAGCCGGCGCC
AGGTCGCGACAAGTTGGGCACCTTCGTGCAGGTGGACGAAAACGGCAAGCTGCCGGCATCGGCGATGCCGGCCGTGCCCG
CACAACCGCTGCCGCCCGCGCCGGGCGCCGCCACGCCCGCGGACGCCGCCATTGCCCAGGTCGCACCTATGCCGGCGCCG
GTTGCAACGCCAGCGCCGGCCAAGTCCGGCGACGCCGGCAAGAAGTGGTACGACAAACTCAGCCTGCGCGGCTACACCCA
GATCCGTTACAACCAGGGCATCGGCGGCGATGCGCAGGACCTGCGCGCGCCGGGCGACCGCTTTATCGGCAACGACCAGA
GCCTGGGCATCCGCCGTGCGCGCCTGGTGCTGAGTGGCGATCTCAACGAGCATGTGTCGCTGTATTTCCAGCCGGATTTT
GCCAGCACGCCCACTGGCTCCACCACCTCCAACTTTGCGCAGCTGCGCGACGCCTACGCCGATATCTTCTTCGACAAGAA
GCGCGAATACCGCGTGCGTGTGGGTCAATCGAAAATGCCGTACGGCTGGGAAAATCTGCAGTCCAGCCAGAACCGGCTCT
CGCTGGATCGCGCCGATGCATTGAACTCCGGCCTGCGCGACGAACGCGATATCGGTGCGGTGTTCTATTACAGCCCCACC
GTGGCCAAGGGCCGCTTCCAGGACTTGGTCAAGTCGGGATTGAAGGGGTCGGGCGACTACGGCGTGATCGGTGCCGGTGT
GTACAACGGCCAGGGCGCCAACCGCGCCGAGCGTAACGACAGCATGCACGCGGTGGTGCACGCCACCTACCCGTTCAAGT
TCGCCAACGGCCAGTATCTGGAAGTGGGCGCCGACGCCTACGCCGGCCGCTTCGTGCCGACCGCGGCAGCAGTGAATATC
GGCGGCCGCAGCTTTACCCCGGCCATCACCGAGCCCAATGGCTATACCGACCAGCGCGTGGCCGCGCACATCATCTATTA
CCCGCAGCCGTTCGGCCTGCAGGCGGAGTGGACGGTGGGCCGTGGCCCGGAACTGGATGTGGCCCAGCGCCGCATCCGCA
CCCGCTCGCTGAGCGGCGGCTATGTGCAGGCCATGTTCAAGCACGACTTCAACTACGGCACCTTGCTGCCGTACCTGAAA
TGGCAGACCTACCGCGGCGGCTCCAAGTTCGACACCAATGCCCCGCGCATGCGTCTGGACGAAGTGGAAGCCGGTGTCGA
ATGGCAGCCGATGGATGCGCTGGAACTGGTGTTCGCCTATTCGAAGATGAAGCGTACCGACGTCGGCACCGCGCCGTATC
CGGTCGTTGAAGGCGATTTGCTGCGCCTGCAGTTGCAGGTCAATTACTGA

Upstream 100 bases:

>100_bases
CACGTTCCGGATGCAGTTCTGTTCGACCACCTTCATCACATCGCGCGCAGCTGGGCTCGCCTCACGTTGGTCGCATAACT
GCCATCGCCCCGACACGACG

Downstream 100 bases:

>100_bases
GCAAGGTCGGCAGCGCCGGTCATCGCTGCTGCGGCGGTCATGACCGGTGCATTCGTGTGCGGCTGCGTGCGTTCGCGCCG
GGATCTGCATGCACGCAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: Phosphate-Selective Porin

Number of amino acids: Translated: 549; Mature: 548

Protein sequence:

>549_residues
MTQGRDSEVRQCHQTDIKSKYNCCHCRYVRTTGAWQALPRRAAALLAAPDRRSRRPVSLARAGPMKKRNLATVLCALSAT
ASGSTLAAELELYVDRKTKQIFAEPAPGRDKLGTFVQVDENGKLPASAMPAVPAQPLPPAPGAATPADAAIAQVAPMPAP
VATPAPAKSGDAGKKWYDKLSLRGYTQIRYNQGIGGDAQDLRAPGDRFIGNDQSLGIRRARLVLSGDLNEHVSLYFQPDF
ASTPTGSTTSNFAQLRDAYADIFFDKKREYRVRVGQSKMPYGWENLQSSQNRLSLDRADALNSGLRDERDIGAVFYYSPT
VAKGRFQDLVKSGLKGSGDYGVIGAGVYNGQGANRAERNDSMHAVVHATYPFKFANGQYLEVGADAYAGRFVPTAAAVNI
GGRSFTPAITEPNGYTDQRVAAHIIYYPQPFGLQAEWTVGRGPELDVAQRRIRTRSLSGGYVQAMFKHDFNYGTLLPYLK
WQTYRGGSKFDTNAPRMRLDEVEAGVEWQPMDALELVFAYSKMKRTDVGTAPYPVVEGDLLRLQLQVNY

Sequences:

>Translated_549_residues
MTQGRDSEVRQCHQTDIKSKYNCCHCRYVRTTGAWQALPRRAAALLAAPDRRSRRPVSLARAGPMKKRNLATVLCALSAT
ASGSTLAAELELYVDRKTKQIFAEPAPGRDKLGTFVQVDENGKLPASAMPAVPAQPLPPAPGAATPADAAIAQVAPMPAP
VATPAPAKSGDAGKKWYDKLSLRGYTQIRYNQGIGGDAQDLRAPGDRFIGNDQSLGIRRARLVLSGDLNEHVSLYFQPDF
ASTPTGSTTSNFAQLRDAYADIFFDKKREYRVRVGQSKMPYGWENLQSSQNRLSLDRADALNSGLRDERDIGAVFYYSPT
VAKGRFQDLVKSGLKGSGDYGVIGAGVYNGQGANRAERNDSMHAVVHATYPFKFANGQYLEVGADAYAGRFVPTAAAVNI
GGRSFTPAITEPNGYTDQRVAAHIIYYPQPFGLQAEWTVGRGPELDVAQRRIRTRSLSGGYVQAMFKHDFNYGTLLPYLK
WQTYRGGSKFDTNAPRMRLDEVEAGVEWQPMDALELVFAYSKMKRTDVGTAPYPVVEGDLLRLQLQVNY
>Mature_548_residues
TQGRDSEVRQCHQTDIKSKYNCCHCRYVRTTGAWQALPRRAAALLAAPDRRSRRPVSLARAGPMKKRNLATVLCALSATA
SGSTLAAELELYVDRKTKQIFAEPAPGRDKLGTFVQVDENGKLPASAMPAVPAQPLPPAPGAATPADAAIAQVAPMPAPV
ATPAPAKSGDAGKKWYDKLSLRGYTQIRYNQGIGGDAQDLRAPGDRFIGNDQSLGIRRARLVLSGDLNEHVSLYFQPDFA
STPTGSTTSNFAQLRDAYADIFFDKKREYRVRVGQSKMPYGWENLQSSQNRLSLDRADALNSGLRDERDIGAVFYYSPTV
AKGRFQDLVKSGLKGSGDYGVIGAGVYNGQGANRAERNDSMHAVVHATYPFKFANGQYLEVGADAYAGRFVPTAAAVNIG
GRSFTPAITEPNGYTDQRVAAHIIYYPQPFGLQAEWTVGRGPELDVAQRRIRTRSLSGGYVQAMFKHDFNYGTLLPYLKW
QTYRGGSKFDTNAPRMRLDEVEAGVEWQPMDALELVFAYSKMKRTDVGTAPYPVVEGDLLRLQLQVNY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60183; Mature: 60051

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQGRDSEVRQCHQTDIKSKYNCCHCRYVRTTGAWQALPRRAAALLAAPDRRSRRPVSLA
CCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCEEHH
RAGPMKKRNLATVLCALSATASGSTLAAELELYVDRKTKQIFAEPAPGRDKLGTFVQVDE
HCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCHHHCCCCCCCCCCCCCEEEECC
NGKLPASAMPAVPAQPLPPAPGAATPADAAIAQVAPMPAPVATPAPAKSGDAGKKWYDKL
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
SLRGYTQIRYNQGIGGDAQDLRAPGDRFIGNDQSLGIRRARLVLSGDLNEHVSLYFQPDF
CCCEEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEECCCC
ASTPTGSTTSNFAQLRDAYADIFFDKKREYRVRVGQSKMPYGWENLQSSQNRLSLDRADA
CCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHCCHHHCCCHHHHH
LNSGLRDERDIGAVFYYSPTVAKGRFQDLVKSGLKGSGDYGVIGAGVYNGQGANRAERND
HHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEECEECCCCCCCCCCCC
SMHAVVHATYPFKFANGQYLEVGADAYAGRFVPTAAAVNIGGRSFTPAITEPNGYTDQRV
CEEEEEEEECCEEECCCCEEEECCCHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCE
AAHIIYYPQPFGLQAEWTVGRGPELDVAQRRIRTRSLSGGYVQAMFKHDFNYGTLLPYLK
EEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEHHHHCCCCCCCCCCEE
WQTYRGGSKFDTNAPRMRLDEVEAGVEWQPMDALELVFAYSKMKRTDVGTAPYPVVEGDL
EEEECCCCCCCCCCCCEEHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCE
LRLQLQVNY
EEEEEEECC
>Mature Secondary Structure 
TQGRDSEVRQCHQTDIKSKYNCCHCRYVRTTGAWQALPRRAAALLAAPDRRSRRPVSLA
CCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCEEHH
RAGPMKKRNLATVLCALSATASGSTLAAELELYVDRKTKQIFAEPAPGRDKLGTFVQVDE
HCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCHHHCCCCCCCCCCCCCEEEECC
NGKLPASAMPAVPAQPLPPAPGAATPADAAIAQVAPMPAPVATPAPAKSGDAGKKWYDKL
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
SLRGYTQIRYNQGIGGDAQDLRAPGDRFIGNDQSLGIRRARLVLSGDLNEHVSLYFQPDF
CCCEEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEECCCC
ASTPTGSTTSNFAQLRDAYADIFFDKKREYRVRVGQSKMPYGWENLQSSQNRLSLDRADA
CCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHCCHHHCCCHHHHH
LNSGLRDERDIGAVFYYSPTVAKGRFQDLVKSGLKGSGDYGVIGAGVYNGQGANRAERND
HHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEECEECCCCCCCCCCCC
SMHAVVHATYPFKFANGQYLEVGADAYAGRFVPTAAAVNIGGRSFTPAITEPNGYTDQRV
CEEEEEEEECCEEECCCCEEEECCCHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCE
AAHIIYYPQPFGLQAEWTVGRGPELDVAQRRIRTRSLSGGYVQAMFKHDFNYGTLLPYLK
EEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEHHHHCCCCCCCCCCEE
WQTYRGGSKFDTNAPRMRLDEVEAGVEWQPMDALELVFAYSKMKRTDVGTAPYPVVEGDL
EEEECCCCCCCCCCCCEEHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCE
LRLQLQVNY
EEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA