| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is zraS [H]
Identifier: 21240999
GI number: 21240999
Start: 272967
End: 274409
Strand: Direct
Name: zraS [H]
Synonym: XAC0225
Alternate gene names: 21240999
Gene position: 272967-274409 (Clockwise)
Preceding gene: 21240998
Following gene: 21241000
Centisome position: 5.27
GC content: 68.33
Gene sequence:
>1443_bases ATGCCCCGTTCGCTGCTCCGGCAACTGTTGCTGATCTGGATGGTGATCGTGGCCGCCTGTGTGGGCGTGGCCACGATGTT GTACGGCCTGTATCGGCAGACCGAGGGAGTGCGGCTGGAGGAGGCGCGCCAGCAATTGGGCGGGCAATGCGCGCGCATCG TGCAACGCTATGCCGGGGCAAGCGAGGCAGCGCGTCGCGGCGACGATGGCGCGGGCCTGGCAGCGGTGGTGGTGCAGCTG GTGCTGGCCGATGCACCAGGTGTCGAAGGCGGTGTCTGGGACCTGCACAAGGGCTTTGTTGCCTACGCGTACCCGACCTA CGACGGCAGCGATCACAAGACCGATATTCCCGCCGCTGAGTGGGCCAACATCGTCAACGCGGCGCAGCAGAGCGTGACGA CAAAGCAAGCGGCGCAATACCGTCGCGACGGTCGCCGCGAGGTCCTGCTGATCAGCGCCTGTCCGTTGGCATCCGGCAGC GCGGCATGGACGATGACGCGGGTGCCGGCCAGCAAGGCCGACGCGTGGCGGCCCCTGGTCGTCGGCATGTTGCTGATCTT CGCGATGGTGGCGATATCGGCCATTGCGCTGGGCGTGCTGGTGCGGCGCTGGAGCCAGCGCCTGCAGCGTATCCAGCAAG CGCTGGCCGCCGACACCGAGACGCCGCACATTCCGCCGACCGGGACGCCGGAACTGGACCGGCTGGGCGCGGCGGTCAAC GACTATGCGCAGCGCAACGCGCAGGCGCTGGCGCAGACGCGCCGGCTGGCCGCCGAACTGTCGCGGCACGAACGGCTTGC CGCGCTTGGGCGTATGACGGCCACTGTGGCGCATGAAATCCGCAACCCGATTGCCACGATGCGGTTGGCGCTGGAAAACG AGATCGCGCGCGGCGATGCGACGCCGGACGATGCTGCGCATGGCGAGTTGATGCTGGGGCAGATTCGTCGCCTGGATGGT GTGGTCGAGAGCCTGCTCGGCATGGTGCAGCCGATCCGTCTGCAGCTGGAGACGGTGGTGGTGCAGGACTGGCTGGCGAC GCTGCTGGAGCACGGTCCGTTACCGCCCGGCACGTCGCCGCCCCGCGTGCTGCTGCCGGCTGCGCCGTTGCGCTGGACCC TGGATCCGCAGCAACTGGGGCGCGCGGTGCACAACCTGCTGCGCAATGCCGCGCAGCACGCCGATCCAGGCAGCGAGGTT ACGCTGCAAGCGGCTGCAGTGGAGGGCATGTTGCAACTTCAGGTCTGCAACCGTGGCGCGCCGATCGCAGAACCGATCGC CGCACACTTGTTCGAACCGTTCGTCAGTGGCCGCGCCGACGGCAATGGCCTGGGGCTGGCGCTGGTGCGCGAGATCGCGC GCGCGCATGGCGGACACGCGCGCTACGCACATGCCGACGGGCTGACCCATTTCATTCTGGAGTTGCCATGGCGCGCATCC TGA
Upstream 100 bases:
>100_bases AGCGGGCGTGGCGATGAGGTCATCGCGTTGGTAAAGACCAACCTGCGTTAATTCAGTTGCACTCACGCACACTGGCTGTC CTCTTCAGGCCGCTTCGTCC
Downstream 100 bases:
>100_bases TCATCGATGACGATGCCGCGTTTCGCACCACCTTGCAGGCCACCTTGCGCTCGCTCGGGCATACGGCGGTCGCCGCCGAG AATGGGCCGGACGGGCTGGC
Product: two-component system sensor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 480; Mature: 479
Protein sequence:
>480_residues MPRSLLRQLLLIWMVIVAACVGVATMLYGLYRQTEGVRLEEARQQLGGQCARIVQRYAGASEAARRGDDGAGLAAVVVQL VLADAPGVEGGVWDLHKGFVAYAYPTYDGSDHKTDIPAAEWANIVNAAQQSVTTKQAAQYRRDGRREVLLISACPLASGS AAWTMTRVPASKADAWRPLVVGMLLIFAMVAISAIALGVLVRRWSQRLQRIQQALAADTETPHIPPTGTPELDRLGAAVN DYAQRNAQALAQTRRLAAELSRHERLAALGRMTATVAHEIRNPIATMRLALENEIARGDATPDDAAHGELMLGQIRRLDG VVESLLGMVQPIRLQLETVVVQDWLATLLEHGPLPPGTSPPRVLLPAAPLRWTLDPQQLGRAVHNLLRNAAQHADPGSEV TLQAAAVEGMLQLQVCNRGAPIAEPIAAHLFEPFVSGRADGNGLGLALVREIARAHGGHARYAHADGLTHFILELPWRAS
Sequences:
>Translated_480_residues MPRSLLRQLLLIWMVIVAACVGVATMLYGLYRQTEGVRLEEARQQLGGQCARIVQRYAGASEAARRGDDGAGLAAVVVQL VLADAPGVEGGVWDLHKGFVAYAYPTYDGSDHKTDIPAAEWANIVNAAQQSVTTKQAAQYRRDGRREVLLISACPLASGS AAWTMTRVPASKADAWRPLVVGMLLIFAMVAISAIALGVLVRRWSQRLQRIQQALAADTETPHIPPTGTPELDRLGAAVN DYAQRNAQALAQTRRLAAELSRHERLAALGRMTATVAHEIRNPIATMRLALENEIARGDATPDDAAHGELMLGQIRRLDG VVESLLGMVQPIRLQLETVVVQDWLATLLEHGPLPPGTSPPRVLLPAAPLRWTLDPQQLGRAVHNLLRNAAQHADPGSEV TLQAAAVEGMLQLQVCNRGAPIAEPIAAHLFEPFVSGRADGNGLGLALVREIARAHGGHARYAHADGLTHFILELPWRAS >Mature_479_residues PRSLLRQLLLIWMVIVAACVGVATMLYGLYRQTEGVRLEEARQQLGGQCARIVQRYAGASEAARRGDDGAGLAAVVVQLV LADAPGVEGGVWDLHKGFVAYAYPTYDGSDHKTDIPAAEWANIVNAAQQSVTTKQAAQYRRDGRREVLLISACPLASGSA AWTMTRVPASKADAWRPLVVGMLLIFAMVAISAIALGVLVRRWSQRLQRIQQALAADTETPHIPPTGTPELDRLGAAVND YAQRNAQALAQTRRLAAELSRHERLAALGRMTATVAHEIRNPIATMRLALENEIARGDATPDDAAHGELMLGQIRRLDGV VESLLGMVQPIRLQLETVVVQDWLATLLEHGPLPPGTSPPRVLLPAAPLRWTLDPQQLGRAVHNLLRNAAQHADPGSEVT LQAAAVEGMLQLQVCNRGAPIAEPIAAHLFEPFVSGRADGNGLGLALVREIARAHGGHARYAHADGLTHFILELPWRAS
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=232, Percent_Identity=31.4655172413793, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1790300, Length=237, Percent_Identity=29.535864978903, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1788549, Length=226, Percent_Identity=28.7610619469027, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1786783, Length=319, Percent_Identity=24.7648902821317, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1790551, Length=284, Percent_Identity=28.8732394366197, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 51751; Mature: 51620
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRSLLRQLLLIWMVIVAACVGVATMLYGLYRQTEGVRLEEARQQLGGQCARIVQRYAGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCH SEAARRGDDGAGLAAVVVQLVLADAPGVEGGVWDLHKGFVAYAYPTYDGSDHKTDIPAAE HHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCEEEEECCCCCCCCCCCCCHHH WANIVNAAQQSVTTKQAAQYRRDGRREVLLISACPLASGSAAWTMTRVPASKADAWRPLV HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCHHHHH VGMLLIFAMVAISAIALGVLVRRWSQRLQRIQQALAADTETPHIPPTGTPELDRLGAAVN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH DYAQRNAQALAQTRRLAAELSRHERLAALGRMTATVAHEIRNPIATMRLALENEIARGDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TPDDAAHGELMLGQIRRLDGVVESLLGMVQPIRLQLETVVVQDWLATLLEHGPLPPGTSP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PRVLLPAAPLRWTLDPQQLGRAVHNLLRNAAQHADPGSEVTLQAAAVEGMLQLQVCNRGA CEEEECCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCCCC PIAEPIAAHLFEPFVSGRADGNGLGLALVREIARAHGGHARYAHADGLTHFILELPWRAS CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEHHCCHHHHHHHCCCCCC >Mature Secondary Structure PRSLLRQLLLIWMVIVAACVGVATMLYGLYRQTEGVRLEEARQQLGGQCARIVQRYAGA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCH SEAARRGDDGAGLAAVVVQLVLADAPGVEGGVWDLHKGFVAYAYPTYDGSDHKTDIPAAE HHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCEEEEECCCCCCCCCCCCCHHH WANIVNAAQQSVTTKQAAQYRRDGRREVLLISACPLASGSAAWTMTRVPASKADAWRPLV HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCHHHHH VGMLLIFAMVAISAIALGVLVRRWSQRLQRIQQALAADTETPHIPPTGTPELDRLGAAVN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH DYAQRNAQALAQTRRLAAELSRHERLAALGRMTATVAHEIRNPIATMRLALENEIARGDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TPDDAAHGELMLGQIRRLDGVVESLLGMVQPIRLQLETVVVQDWLATLLEHGPLPPGTSP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PRVLLPAAPLRWTLDPQQLGRAVHNLLRNAAQHADPGSEVTLQAAAVEGMLQLQVCNRGA CEEEECCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCCCC PIAEPIAAHLFEPFVSGRADGNGLGLALVREIARAHGGHARYAHADGLTHFILELPWRAS CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEHHCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 2666400; 11243806 [H]