| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228505
Identifier: 21228505
GI number: 21228505
Start: 2864249
End: 2865448
Strand: Reverse
Name: 21228505
Synonym: MM_2403
Alternate gene names: NA
Gene position: 2865448-2864249 (Counterclockwise)
Preceding gene: 21228506
Following gene: 21228504
Centisome position: 69.95
GC content: 48.33
Gene sequence:
>1200_bases ATGTTCCCTAAAGAATTCAGATACAGTCCAAGGAATCTGATAGACCTTTTGACTGAGATGAAGGATACTTCCGAACTCAT GGTAGACCTGGCGTACTCCGCAATGGTCTATGATGATGAGGACATTGCAGAAGAGGTGCTTAACCTTGAAGATAAAATGG ATACTCTCGACTATCATATGAAAATGGCTGCAATGTTAAGCACACGCAGGGTCGATGAAGCTGAAGAACTCCTGGGAGTC CTGAAGGTTGCCGCGTCCTCTGAGAATATAGCAAATGCTGCAGGTGATATTGCCAAAATTGTCCTTATGAATATGGGCAT TCCTATGGAATTGAAGGTAGCCCTCAGAGAGGCAGAAGAAACCATAGTCAGGGCAACCGTTGCTGCAGAATCCGTAATGG TCGGGCGTACTCTTGGAGACCTCGAACTTGACATAGAGACCGGGATGTGGATAATTGCAATCCGCAGAAGTGAAGACTGG ATCTATGACCCTGATACTGACACCCGGATTCGCCAGGGAGACGTGTTATTTGCAAGAGGGCACGATGAGGGTGTCCCTCT ATTCTTCCAGATGGCAACTACAAAAAAGTTCATCCCGAGGGAAATCGAGCACGATAAGGTCATAAAGGACCTCGAGCATG CCGTGGACATAATCGTGGACATGAAAAATATGTCTGAACTTTCTGTAGGGCTTGCATACTCTGCCATCCTTTTTGATAAC GAAGACATTGCATACGAAGTAAGTGCACTGGAATCAGAAATGGATTCCATGAAGTACGAACTCCAGCACTGGGTACTTGA AACCGCAAAGCATGTTGATGATGTAAACATCCTAAGGGGAATACTGCACCTTGCCAGCGCCTCGGAAGCAATTTCAGACG CCGCCTACGGGATAGCAGATACCGTGCTCAGGGACATAGAGCTCCACCCGATCATCACCCTTGCAGTCCGCAACTCGGAA GAGGTGATCACACGGCTCCAGGTCGAAAAATGCTCCCCAATTGTAGGCAAGACCTTCTCAGAACTGAGACTGGAAACCGA AACGGGACTGCATGTGATGGCGATAAAAAGAGCTGAACGCTGGGTCTATGCCCCCAAAAGCAACACCGTTGTCCAGGCAG GGGACATGCTCATTGCCCGTGGCTCACGAATAGGAGAAGGTGCTCTGATAGAGATGTGCGAGTGCAAGTTACGCCAGTAA
Upstream 100 bases:
>100_bases ATTATCAGGCTTCCCGACAGGGAATAATTCGAAAATTAATAATTACTATGAGGTATATACCCATAAATACCAACAATAAG GTAGAGTTGATACATAGACC
Downstream 100 bases:
>100_bases AAACCAGACTGTGATTCGGGACCGCACGGAATTGAAGATTTTCCGGGGATTGCAATATAATCGCAACAGTACGCCGTTCT TTTCGGCAGAGTTGCGGCTC
Product: potassium channel protein
Products: NA
Alternate protein names: PhoU Family Protein; Potassium Channel; Potassium Channel Protein; TrkA Domain-Containing Protein; Phosphate Transport Regulator; TrkA-C Domain-Containing Protein; Potassium Channel Related Protein; TrkA-C; Potassium Channel-Related Protein; Potassium Channel-Like Protein
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MFPKEFRYSPRNLIDLLTEMKDTSELMVDLAYSAMVYDDEDIAEEVLNLEDKMDTLDYHMKMAAMLSTRRVDEAEELLGV LKVAASSENIANAAGDIAKIVLMNMGIPMELKVALREAEETIVRATVAAESVMVGRTLGDLELDIETGMWIIAIRRSEDW IYDPDTDTRIRQGDVLFARGHDEGVPLFFQMATTKKFIPREIEHDKVIKDLEHAVDIIVDMKNMSELSVGLAYSAILFDN EDIAYEVSALESEMDSMKYELQHWVLETAKHVDDVNILRGILHLASASEAISDAAYGIADTVLRDIELHPIITLAVRNSE EVITRLQVEKCSPIVGKTFSELRLETETGLHVMAIKRAERWVYAPKSNTVVQAGDMLIARGSRIGEGALIEMCECKLRQ
Sequences:
>Translated_399_residues MFPKEFRYSPRNLIDLLTEMKDTSELMVDLAYSAMVYDDEDIAEEVLNLEDKMDTLDYHMKMAAMLSTRRVDEAEELLGV LKVAASSENIANAAGDIAKIVLMNMGIPMELKVALREAEETIVRATVAAESVMVGRTLGDLELDIETGMWIIAIRRSEDW IYDPDTDTRIRQGDVLFARGHDEGVPLFFQMATTKKFIPREIEHDKVIKDLEHAVDIIVDMKNMSELSVGLAYSAILFDN EDIAYEVSALESEMDSMKYELQHWVLETAKHVDDVNILRGILHLASASEAISDAAYGIADTVLRDIELHPIITLAVRNSE EVITRLQVEKCSPIVGKTFSELRLETETGLHVMAIKRAERWVYAPKSNTVVQAGDMLIARGSRIGEGALIEMCECKLRQ >Mature_399_residues MFPKEFRYSPRNLIDLLTEMKDTSELMVDLAYSAMVYDDEDIAEEVLNLEDKMDTLDYHMKMAAMLSTRRVDEAEELLGV LKVAASSENIANAAGDIAKIVLMNMGIPMELKVALREAEETIVRATVAAESVMVGRTLGDLELDIETGMWIIAIRRSEDW IYDPDTDTRIRQGDVLFARGHDEGVPLFFQMATTKKFIPREIEHDKVIKDLEHAVDIIVDMKNMSELSVGLAYSAILFDN EDIAYEVSALESEMDSMKYELQHWVLETAKHVDDVNILRGILHLASASEAISDAAYGIADTVLRDIELHPIITLAVRNSE EVITRLQVEKCSPIVGKTFSELRLETETGLHVMAIKRAERWVYAPKSNTVVQAGDMLIARGSRIGEGALIEMCECKLRQ
Specific function: Unknown
COG id: COG3273
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44859; Mature: 44859
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFPKEFRYSPRNLIDLLTEMKDTSELMVDLAYSAMVYDDEDIAEEVLNLEDKMDTLDYHM CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHEEECCHHHHHHHHCHHHHHHHHHHHH KMAAMLSTRRVDEAEELLGVLKVAASSENIANAAGDIAKIVLMNMGIPMELKVALREAEE HHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH TIVRATVAAESVMVGRTLGDLELDIETGMWIIAIRRSEDWIYDPDTDTRIRQGDVLFARG HHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEEEECCCCEECCCCCCEEECCCEEEECC HDEGVPLFFQMATTKKFIPREIEHDKVIKDLEHAVDIIVDMKNMSELSVGLAYSAILFDN CCCCCCEEEEECHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECC EDIAYEVSALESEMDSMKYELQHWVLETAKHVDDVNILRGILHLASASEAISDAAYGIAD CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TVLRDIELHPIITLAVRNSEEVITRLQVEKCSPIVGKTFSELRLETETGLHVMAIKRAER HHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCHHHCCHHHHEEECCCCEEEEEEECCHH WVYAPKSNTVVQAGDMLIARGSRIGEGALIEMCECKLRQ EEECCCCCCEEEECCEEEECCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MFPKEFRYSPRNLIDLLTEMKDTSELMVDLAYSAMVYDDEDIAEEVLNLEDKMDTLDYHM CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHEEECCHHHHHHHHCHHHHHHHHHHHH KMAAMLSTRRVDEAEELLGVLKVAASSENIANAAGDIAKIVLMNMGIPMELKVALREAEE HHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH TIVRATVAAESVMVGRTLGDLELDIETGMWIIAIRRSEDWIYDPDTDTRIRQGDVLFARG HHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEEEECCCCEECCCCCCEEECCCEEEECC HDEGVPLFFQMATTKKFIPREIEHDKVIKDLEHAVDIIVDMKNMSELSVGLAYSAILFDN CCCCCCEEEEECHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECC EDIAYEVSALESEMDSMKYELQHWVLETAKHVDDVNILRGILHLASASEAISDAAYGIAD CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TVLRDIELHPIITLAVRNSEEVITRLQVEKCSPIVGKTFSELRLETETGLHVMAIKRAER HHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCHHHCCHHHHEEECCCCEEEEEEECCHH WVYAPKSNTVVQAGDMLIARGSRIGEGALIEMCECKLRQ EEECCCCCCEEEECCEEEECCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA