| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is fgd1 [H]
Identifier: 21228297
GI number: 21228297
Start: 2607117
End: 2608115
Strand: Reverse
Name: fgd1 [H]
Synonym: MM_2195
Alternate gene names: 21228297
Gene position: 2608115-2607117 (Counterclockwise)
Preceding gene: 21228298
Following gene: 21228292
Centisome position: 63.67
GC content: 46.95
Gene sequence:
>999_bases ATGTTAAAAATAGGATACAAAATTGGAGCTGAGCAGTTTTTACCGTCAGAGATGCTTGAGCAGGCGATTGTAGCCGAGAA AAACGGGTTTGAAAGCATAGATGTGAGTGACCATTTCCATCCCTGGAGCGAAGAAGGACAGGCATGTTTTTCCTGGAGCT GGCTTGGAGCCGCAGCTGCAAGGACAGAGACCATTGAACTGGGACCCGGAGTTACATGCCCTATTCTGCGCTATAACCCG GCAATTATTGCCCAGGCAGCAGCAACTGTCTCTTCTCTGGCTGGAGGCAGGACCTACCTTGGAGTCGGGACCGGGGAAGC GCTCAATGAATATCCGGTAACCTTCGAATGGCCGGCTTTTAGAGAGCGCCAGGCAATGATGATAGAAGCCGTACAGCTTA TCCGCAGCCTGTGGACAGGAGAAAAAGTAGATTTTCAAGGGTGCTATTATCGGACAAAGCAGGCTAAACTTTATACCCTG CCCAAAAATGAGATTCCTATTTACATTTCTTCCCTTGTTCCGGAAAGCGCCTATCTTGCCGGGTATTATGGAGACGGCCT CATTACCGTAGGAGGGTCTCTTGAGATACCGGAATATGAAAGGATGCTCTCTGAGGTCAGAAGAGGGGCTACTGATGCAG GCAGAGATTTTGAGAAGATGCCAAAAGCCGTGGAGCTTTTTGTGGAGTATACAGATGATACCGAAAAAGTGGTTGAAAGC TTTAAAAAATACTGGGCAGGGGCTATGATCCCGGCCCTTTTCCTGAATAAAATCTATACTCCTGCGATGTCTGCCCAAAA CGGCAAGGTAGTTGGCAGGGATACTATTCAAAAATCAGTCTGTATTTCGGGAGACCCTGAAAAGCACATAGAATATGTAA AGCAGTACATCGATGCAGGTTTCACACATTTTTATTTCCATTCTGCAGCCGGGGACCAGATAGACTTTCTTGAAAGGTAC GGAAAAGACGTTTTACCTGCTTTAAAGAAGATGGGATGA
Upstream 100 bases:
>100_bases CTATTTTTATCGCCACATTATCAGAGGCGTCAGGACCTTATTATATTAACGCAAAAAATATAATTATCCGAGATATAACT GGAGATACCGGGGGTCAAAT
Downstream 100 bases:
>100_bases ATTTCCCATCAGGTTTTATTTTTTTACATATTACAAAGTTTTTTGTAATTTCCGGCTTTTACCTGTCTTTTTTACCTGTC TCTTTTGCCTGTCTTTTTGC
Product: F420-dependent glucose-6-phosphate dehydrogenase
Products: NA
Alternate protein names: F420_G6P_DH [H]
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MLKIGYKIGAEQFLPSEMLEQAIVAEKNGFESIDVSDHFHPWSEEGQACFSWSWLGAAAARTETIELGPGVTCPILRYNP AIIAQAAATVSSLAGGRTYLGVGTGEALNEYPVTFEWPAFRERQAMMIEAVQLIRSLWTGEKVDFQGCYYRTKQAKLYTL PKNEIPIYISSLVPESAYLAGYYGDGLITVGGSLEIPEYERMLSEVRRGATDAGRDFEKMPKAVELFVEYTDDTEKVVES FKKYWAGAMIPALFLNKIYTPAMSAQNGKVVGRDTIQKSVCISGDPEKHIEYVKQYIDAGFTHFYFHSAAGDQIDFLERY GKDVLPALKKMG
Sequences:
>Translated_332_residues MLKIGYKIGAEQFLPSEMLEQAIVAEKNGFESIDVSDHFHPWSEEGQACFSWSWLGAAAARTETIELGPGVTCPILRYNP AIIAQAAATVSSLAGGRTYLGVGTGEALNEYPVTFEWPAFRERQAMMIEAVQLIRSLWTGEKVDFQGCYYRTKQAKLYTL PKNEIPIYISSLVPESAYLAGYYGDGLITVGGSLEIPEYERMLSEVRRGATDAGRDFEKMPKAVELFVEYTDDTEKVVES FKKYWAGAMIPALFLNKIYTPAMSAQNGKVVGRDTIQKSVCISGDPEKHIEYVKQYIDAGFTHFYFHSAAGDQIDFLERY GKDVLPALKKMG >Mature_332_residues MLKIGYKIGAEQFLPSEMLEQAIVAEKNGFESIDVSDHFHPWSEEGQACFSWSWLGAAAARTETIELGPGVTCPILRYNP AIIAQAAATVSSLAGGRTYLGVGTGEALNEYPVTFEWPAFRERQAMMIEAVQLIRSLWTGEKVDFQGCYYRTKQAKLYTL PKNEIPIYISSLVPESAYLAGYYGDGLITVGGSLEIPEYERMLSEVRRGATDAGRDFEKMPKAVELFVEYTDDTEKVVES FKKYWAGAMIPALFLNKIYTPAMSAQNGKVVGRDTIQKSVCISGDPEKHIEYVKQYIDAGFTHFYFHSAAGDQIDFLERY GKDVLPALKKMG
Specific function: Involved in the bioreductive activation of the prodrug PA-824 (nitroimidazo-oxazine) developed for anti-tuberculosis therapy against both replicating and persistent bacteria. It does not interact directly with PA-824 but, rather, provides reduced F420 to
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the F420-dependent glucose-6-phosphate dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1787247, Length=208, Percent_Identity=26.4423076923077, Blast_Score=66, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019945 - InterPro: IPR019944 - InterPro: IPR011251 - InterPro: IPR016048 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: =1.1.99.34 [H]
Molecular weight: Translated: 37010; Mature: 37010
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKIGYKIGAEQFLPSEMLEQAIVAEKNGFESIDVSDHFHPWSEEGQACFSWSWLGAAAA CEEECCCCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHH RTETIELGPGVTCPILRYNPAIIAQAAATVSSLAGGRTYLGVGTGEALNEYPVTFEWPAF CCEEEECCCCCCCEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHCCCCEEECCCH RERQAMMIEAVQLIRSLWTGEKVDFQGCYYRTKQAKLYTLPKNEIPIYISSLVPESAYLA HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEECCCCCCCEEEHHHCCCCCEEE GYYGDGLITVGGSLEIPEYERMLSEVRRGATDAGRDFEKMPKAVELFVEYTDDTEKVVES EEECCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH FKKYWAGAMIPALFLNKIYTPAMSAQNGKVVGRDTIQKSVCISGDPEKHIEYVKQYIDAG HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHCEECCCCHHHHHHHHHHHHHCC FTHFYFHSAAGDQIDFLERYGKDVLPALKKMG CCEEEEECCCCCHHHHHHHCCHHHHHHHHHCC >Mature Secondary Structure MLKIGYKIGAEQFLPSEMLEQAIVAEKNGFESIDVSDHFHPWSEEGQACFSWSWLGAAAA CEEECCCCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHH RTETIELGPGVTCPILRYNPAIIAQAAATVSSLAGGRTYLGVGTGEALNEYPVTFEWPAF CCEEEECCCCCCCEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHCCCCEEECCCH RERQAMMIEAVQLIRSLWTGEKVDFQGCYYRTKQAKLYTLPKNEIPIYISSLVPESAYLA HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEECCCCCCCEEEHHHCCCCCEEE GYYGDGLITVGGSLEIPEYERMLSEVRRGATDAGRDFEKMPKAVELFVEYTDDTEKVVES EEECCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH FKKYWAGAMIPALFLNKIYTPAMSAQNGKVVGRDTIQKSVCISGDPEKHIEYVKQYIDAG HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHCEECCCCHHHHHHHHHHHHHCC FTHFYFHSAAGDQIDFLERYGKDVLPALKKMG CCEEEEECCCCCHHHHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]