Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228298

Identifier: 21228298

GI number: 21228298

Start: 2608535

End: 2609350

Strand: Reverse

Name: 21228298

Synonym: MM_2196

Alternate gene names: NA

Gene position: 2609350-2608535 (Counterclockwise)

Preceding gene: 21228299

Following gene: 21228297

Centisome position: 63.7

GC content: 44.98

Gene sequence:

>816_bases
TTGAGAATGGACCGCCAGACATACCAGAAATTATATAGTTCGCTGCATAACTTTAGAGACGTTTTCCGCCTCTCAGAGGA
AGATACCATGCCTCCTGGCATGCTTGCTACCATTCTTAATCAAAAAATAGTGAAAATGACGAGGTTCAAGCACAGAAAAG
TCTATTCCAGAGAAAAGGAACTATTTTTGCGGTGGAAGCAGGGAAGGTCCATTCTTGAACTTGCAGAACACACATTTTTT
CCTCCAACCCTCATGGCTTCCTTAATCCTTAAAAACTGTGACCTGTCCCGAAAAAATATAAACTGGCTGTTCAAGCACCT
GGACTGCATTGAAAACCGCCGCCTGAGAAGAGAAGTCAGAAAAGCTCTTGAAGCAGACTATTTCTTCTCTCCGCGTGCCC
ATGAGATGCAGTGCAAAAAGGGCGAAATGGGAGAAGAAATTATCCGCAAATGGCTTGATGACAGGGAAATTTCTTACTGC
ACCGAAGCTGAAATAAGGGCTCAGGGAGACGGGAAGACCCCGGATTTTGTCCTTTCCGACCCTATTCCCATAGAGGACCA
CATGGTCAGGTGGATTGAAAGCAAAGCCCTTTTTGGGGACGATTTCGAACACAAGCATTACGCAAAGAAACAGTTCAGGG
AATACGCCGACATTTTCGGGGAAGGCATGGTAGTTTACTGGTATGGTTACCTCGAAGACCTCAGTTCCGAAGACGAAGGC
TACCTGATAAAAGACCACAGCTTTTTTGGGGAATATAAAGAGCAGACGGATGAACTGTTTAACTACCTGGTTTACTGGGA
ATCCCCGGTAAAATAA

Upstream 100 bases:

>100_bases
AGTCTACAGGAAAAAAAACCCTGCATATTGGAAAGTTCGTTTTCCGTTCATGTTATTCAACTTTATTTTCTATGTTAAAA
CCAGAAAAGGGACTCACTGA

Downstream 100 bases:

>100_bases
GCCGGGTTACAGGCCAGAATGAAATAGACCGGTAAATGAACTGAATAAACCGGGAAATATCTGGCTTTAATTTCAACTTT
AAAATTTCAACTTTAAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MRMDRQTYQKLYSSLHNFRDVFRLSEEDTMPPGMLATILNQKIVKMTRFKHRKVYSREKELFLRWKQGRSILELAEHTFF
PPTLMASLILKNCDLSRKNINWLFKHLDCIENRRLRREVRKALEADYFFSPRAHEMQCKKGEMGEEIIRKWLDDREISYC
TEAEIRAQGDGKTPDFVLSDPIPIEDHMVRWIESKALFGDDFEHKHYAKKQFREYADIFGEGMVVYWYGYLEDLSSEDEG
YLIKDHSFFGEYKEQTDELFNYLVYWESPVK

Sequences:

>Translated_271_residues
MRMDRQTYQKLYSSLHNFRDVFRLSEEDTMPPGMLATILNQKIVKMTRFKHRKVYSREKELFLRWKQGRSILELAEHTFF
PPTLMASLILKNCDLSRKNINWLFKHLDCIENRRLRREVRKALEADYFFSPRAHEMQCKKGEMGEEIIRKWLDDREISYC
TEAEIRAQGDGKTPDFVLSDPIPIEDHMVRWIESKALFGDDFEHKHYAKKQFREYADIFGEGMVVYWYGYLEDLSSEDEG
YLIKDHSFFGEYKEQTDELFNYLVYWESPVK
>Mature_271_residues
MRMDRQTYQKLYSSLHNFRDVFRLSEEDTMPPGMLATILNQKIVKMTRFKHRKVYSREKELFLRWKQGRSILELAEHTFF
PPTLMASLILKNCDLSRKNINWLFKHLDCIENRRLRREVRKALEADYFFSPRAHEMQCKKGEMGEEIIRKWLDDREISYC
TEAEIRAQGDGKTPDFVLSDPIPIEDHMVRWIESKALFGDDFEHKHYAKKQFREYADIFGEGMVVYWYGYLEDLSSEDEG
YLIKDHSFFGEYKEQTDELFNYLVYWESPVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI194018542, Length=234, Percent_Identity=32.0512820512821, Blast_Score=117, Evalue=8e-27,
Organism=Homo sapiens, GI14210512, Length=180, Percent_Identity=34.4444444444444, Blast_Score=105, Evalue=3e-23,
Organism=Drosophila melanogaster, GI21358261, Length=231, Percent_Identity=26.4069264069264, Blast_Score=79, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32681; Mature: 32681

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMDRQTYQKLYSSLHNFRDVFRLSEEDTMPPGMLATILNQKIVKMTRFKHRKVYSREKE
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFLRWKQGRSILELAEHTFFPPTLMASLILKNCDLSRKNINWLFKHLDCIENRRLRREVR
HHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KALEADYFFSPRAHEMQCKKGEMGEEIIRKWLDDREISYCTEAEIRAQGDGKTPDFVLSD
HHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCCHHCCCHHEECCCCCCCCEEECC
PIPIEDHMVRWIESKALFGDDFEHKHYAKKQFREYADIFGEGMVVYWYGYLEDLSSEDEG
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHCCCCCCC
YLIKDHSFFGEYKEQTDELFNYLVYWESPVK
EEEECCHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRMDRQTYQKLYSSLHNFRDVFRLSEEDTMPPGMLATILNQKIVKMTRFKHRKVYSREKE
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFLRWKQGRSILELAEHTFFPPTLMASLILKNCDLSRKNINWLFKHLDCIENRRLRREVR
HHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KALEADYFFSPRAHEMQCKKGEMGEEIIRKWLDDREISYCTEAEIRAQGDGKTPDFVLSD
HHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCCHHCCCHHEECCCCCCCCEEECC
PIPIEDHMVRWIESKALFGDDFEHKHYAKKQFREYADIFGEGMVVYWYGYLEDLSSEDEG
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHCCCCCCC
YLIKDHSFFGEYKEQTDELFNYLVYWESPVK
EEEECCHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA