Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228292

Identifier: 21228292

GI number: 21228292

Start: 2598268

End: 2599098

Strand: Reverse

Name: 21228292

Synonym: MM_2190

Alternate gene names: NA

Gene position: 2599098-2598268 (Counterclockwise)

Preceding gene: 21228297

Following gene: 21228291

Centisome position: 63.45

GC content: 39.23

Gene sequence:

>831_bases
ATGATTCCTAAATACAGGTACAAACCCGGAGTCTATTTTACTGCGACTTTTATTATAACCTATACTCTCTGGTTTGCAGG
GGCATATTTAAGTTTTCAGGATGATAGCGGGCTGTATATGTTATTAATGATACCTGGGCTGATGGCGCCTTTTCTTGTTT
CACTATTTATGATATCTACATCCAAAAATTCGGATTTAAAAAAGGATTTTATTAACCGTCTTATCAATCTCAGGTTAATA
AGGCCAAAAGTGCTGCTGGCATTTTTTATAATAATGCCACTCACTGTTCTGGTATCTATCTTTCTTTCTCTTCCATTTGG
TGGATCGACTTCTCAATTCCAATTTGCTGAAGGTTACTCATTTTCATCAGGGTTTGTCCCTGCGTTTCTTACTCTTCTCC
TGGCTGCAACTTTTGAAGAGCTTGGATGGAGAGGATACGCCTTTGACAGTCTGCAAAGCAGATACACTTTCTTTATGGCA
TCTCTTATTTTCGGCATACTCTGGTCACTCTGGCACTTCCCACTTATCTTTGTCAAGGACATGTATCAGTATGAGATTTT
CCACGAAAACATCTGGTATGCAGTGAATTTTTTTGTCGGCGTCATCCCTATGGGAGTGATTATCAGCTGGATCTGTATAA
AAAACGGAAAAAGTGTTCTGGCAGCAATTCTCATTCACGTTTCCATCAATTTCTTGCAGGAAGCTCTGCAAATGACCCAA
TTTGCAAAGTGCATTGAAACTGTGGTTATTACTGCCGTCGCTGCCATTATTCTTGCATCAGATAAAAAGATGTTTTTTTC
GAAAGGACATCTTGATGCTGAGAGGATCTGA

Upstream 100 bases:

>100_bases
TTCAAAAAAATCAAGAAAATATTTATACTCTTGGCTATCAAAATGGATCTAAATCTTAAAATAAGGTCAATTACAAATCA
TTTAAAAGTAGAGTGAATAA

Downstream 100 bases:

>100_bases
ATGACGAATAATTCCAAAGAATTCGAAAACTCTTTCCCTTACCTCTATCCCAAAATCTCAATGTGCCTTAAAAATTTTAT
CACTTTCATTTTTTCGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: CAAX Amino Protease Family Protein; Methyltransferase Type; CAAX Amino Terminal Protease Family Protein

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MIPKYRYKPGVYFTATFIITYTLWFAGAYLSFQDDSGLYMLLMIPGLMAPFLVSLFMISTSKNSDLKKDFINRLINLRLI
RPKVLLAFFIIMPLTVLVSIFLSLPFGGSTSQFQFAEGYSFSSGFVPAFLTLLLAATFEELGWRGYAFDSLQSRYTFFMA
SLIFGILWSLWHFPLIFVKDMYQYEIFHENIWYAVNFFVGVIPMGVIISWICIKNGKSVLAAILIHVSINFLQEALQMTQ
FAKCIETVVITAVAAIILASDKKMFFSKGHLDAERI

Sequences:

>Translated_276_residues
MIPKYRYKPGVYFTATFIITYTLWFAGAYLSFQDDSGLYMLLMIPGLMAPFLVSLFMISTSKNSDLKKDFINRLINLRLI
RPKVLLAFFIIMPLTVLVSIFLSLPFGGSTSQFQFAEGYSFSSGFVPAFLTLLLAATFEELGWRGYAFDSLQSRYTFFMA
SLIFGILWSLWHFPLIFVKDMYQYEIFHENIWYAVNFFVGVIPMGVIISWICIKNGKSVLAAILIHVSINFLQEALQMTQ
FAKCIETVVITAVAAIILASDKKMFFSKGHLDAERI
>Mature_276_residues
MIPKYRYKPGVYFTATFIITYTLWFAGAYLSFQDDSGLYMLLMIPGLMAPFLVSLFMISTSKNSDLKKDFINRLINLRLI
RPKVLLAFFIIMPLTVLVSIFLSLPFGGSTSQFQFAEGYSFSSGFVPAFLTLLLAATFEELGWRGYAFDSLQSRYTFFMA
SLIFGILWSLWHFPLIFVKDMYQYEIFHENIWYAVNFFVGVIPMGVIISWICIKNGKSVLAAILIHVSINFLQEALQMTQ
FAKCIETVVITAVAAIILASDKKMFFSKGHLDAERI

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31509; Mature: 31509

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA