| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228040
Identifier: 21228040
GI number: 21228040
Start: 2306509
End: 2306892
Strand: Direct
Name: 21228040
Synonym: MM_1938
Alternate gene names: NA
Gene position: 2306509-2306892 (Clockwise)
Preceding gene: 21228036
Following gene: 21228041
Centisome position: 56.31
GC content: 43.75
Gene sequence:
>384_bases ATGCTCCTTGTAATTGCTACTGTCGTCTTTGCAGCCGGTTGTGCTGAACAGACAGAAGAAGGAGCTACTGAAGAAGTTGT TGAAGAAACCCCCGTAGCTGAAGCACCTGCTGAAGACGAAATGGCTGAAGAAGTAGTTGAAGAAGAAGTACCTGCTGAAG AAGAAGTACCTGCTGAAGAAGAAGTAGCTGAAGAAGCTACCGAAGAAGAAGTACCTGCTGAAGAAGAAGTAGCTGAAGAA GCTACCGAAGAAGAAGTACCTGCTGAAGAAGAAGTAGCTGAAGAAGAAGTAGCTGAAGAAGAAGTAGCCGAAGAAGAAGT AGCCGAAGAAGAAGTAGTTGAAGAAGAAGCTACTGAAGAAGAAGCTACTGAAGAAGCTAAATAA
Upstream 100 bases:
>100_bases TCTCATATGAATGTCTCATGAATTTGTATGAGATGGGTGTAAAAAAGGAAGAGAACTTTTAGAGGTAAAATTAATGAAAA AAATGTTAAAGATCATGGCA
Downstream 100 bases:
>100_bases GAGTGAAACTTCTTAAGCGGTTTATTCTAAGTCACAATGCGCGTAGCCTTTTCAGGCTACATCTTTCTATTTTTGAAATT TATTCCCAATTTACAGTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MLLVIATVVFAAGCAEQTEEGATEEVVEETPVAEAPAEDEMAEEVVEEEVPAEEEVPAEEEVAEEATEEEVPAEEEVAEE ATEEEVPAEEEVAEEEVAEEEVAEEEVAEEEVVEEEATEEEATEEAK
Sequences:
>Translated_127_residues MLLVIATVVFAAGCAEQTEEGATEEVVEETPVAEAPAEDEMAEEVVEEEVPAEEEVPAEEEVAEEATEEEVPAEEEVAEE ATEEEVPAEEEVAEEEVAEEEVAEEEVAEEEVVEEEATEEEATEEAK >Mature_127_residues MLLVIATVVFAAGCAEQTEEGATEEVVEETPVAEAPAEDEMAEEVVEEEVPAEEEVPAEEEVAEEATEEEVPAEEEVAEE ATEEEVPAEEEVAEEEVAEEEVAEEEVAEEEVVEEEATEEEATEEAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13795; Mature: 13795
Theoretical pI: Translated: 2.63; Mature: 2.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLVIATVVFAAGCAEQTEEGATEEVVEETPVAEAPAEDEMAEEVVEEEVPAEEEVPAEE CHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHH EVAEEATEEEVPAEEEVAEEATEEEVPAEEEVAEEEVAEEEVAEEEVAEEEVVEEEATEE HHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EATEEAK HHHHCCC >Mature Secondary Structure MLLVIATVVFAAGCAEQTEEGATEEVVEETPVAEAPAEDEMAEEVVEEEVPAEEEVPAEE CHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHH EVAEEATEEEVPAEEEVAEEATEEEVPAEEEVAEEEVAEEEVAEEEVAEEEVVEEEATEE HHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EATEEAK HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA