Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227919

Identifier: 21227919

GI number: 21227919

Start: 2168258

End: 2168977

Strand: Reverse

Name: 21227919

Synonym: MM_1817

Alternate gene names: NA

Gene position: 2168977-2168258 (Counterclockwise)

Preceding gene: 21227920

Following gene: 21227913

Centisome position: 52.95

GC content: 47.22

Gene sequence:

>720_bases
ATGAGCAGACAGATTTTTTACATGCCTTTCAGCCTGAGATTCCTTTTCTTATTAATAATCATAACAATCTTCGGACTGGG
TTCTCTGTTTCTGGGAGTCATAGTTTCTGCTTTCATGAAAATAGGATTTTCCGCAGAGGACGCCCTCTTAATTCTCTTCC
TGTCTCTCCTTGGAAGCGGAATCAATATCCCGCTGACAACTCTGAAATCCGATATTCCGGTCGTCAAGGATAATTATATA
AAGTTCTTCGGGATTTCCTACAGGATTCCTACCCGCCAGATTGTCAGGAATGAAACCTTACTTGCTATCAATGTGGGAGG
AGCGGTTATCCCTGTCCTGATTTCCGCTTACCTTCTTACGCAATTCCCTTCTTCTCTCCTTCTTGCAGGAGCCGGTGTGG
CGATTGTTGCAATTGTGACTCATTCCGTAGCAAGACCGATCAAAGGAGTGGGTATTGCAACCCCTGCTCTGATCCCACCC
CTTACATCTGTCCTTTCCGCAGTCCTGCTCACCTCGATAGTCCATATTCCAGGCTGCCCTGCAGAACCGTGCCGTGTTAT
TATTGCCTACACCGGAGGAGTACTCGGGACCCTCATAGGAGCTGACCTGCTTAACCTGGGAAAAATTAAGAACCTTGGAG
CTCCGGTTGCAAGCATAGGAGGAGCAGGCACCTTTGATGGGATATTTTTAAGCGGGTTTATCGCCCTTCTCCTGATCTGA

Upstream 100 bases:

>100_bases
TGGTTTTTCTCACAGTTATGAAAAGCCCGGGATATTCATTAATAAAGAGAAAGCACATACCTTTTAATATGCAAAAAACC
GGAAAACAGAGAGTAGTCCC

Downstream 100 bases:

>100_bases
AAAAATCCTCCTGACCTGAGAAAATCCTCCTGACCTGAGAAAATCCTCCTGACCTGAGAAAATCCTCCTGACCTGAGAAA
ATCCTCCTGACCTGAGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MSRQIFYMPFSLRFLFLLIIITIFGLGSLFLGVIVSAFMKIGFSAEDALLILFLSLLGSGINIPLTTLKSDIPVVKDNYI
KFFGISYRIPTRQIVRNETLLAINVGGAVIPVLISAYLLTQFPSSLLLAGAGVAIVAIVTHSVARPIKGVGIATPALIPP
LTSVLSAVLLTSIVHIPGCPAEPCRVIIAYTGGVLGTLIGADLLNLGKIKNLGAPVASIGGAGTFDGIFLSGFIALLLI

Sequences:

>Translated_239_residues
MSRQIFYMPFSLRFLFLLIIITIFGLGSLFLGVIVSAFMKIGFSAEDALLILFLSLLGSGINIPLTTLKSDIPVVKDNYI
KFFGISYRIPTRQIVRNETLLAINVGGAVIPVLISAYLLTQFPSSLLLAGAGVAIVAIVTHSVARPIKGVGIATPALIPP
LTSVLSAVLLTSIVHIPGCPAEPCRVIIAYTGGVLGTLIGADLLNLGKIKNLGAPVASIGGAGTFDGIFLSGFIALLLI
>Mature_238_residues
SRQIFYMPFSLRFLFLLIIITIFGLGSLFLGVIVSAFMKIGFSAEDALLILFLSLLGSGINIPLTTLKSDIPVVKDNYIK
FFGISYRIPTRQIVRNETLLAINVGGAVIPVLISAYLLTQFPSSLLLAGAGVAIVAIVTHSVARPIKGVGIATPALIPPL
TSVLSAVLLTSIVHIPGCPAEPCRVIIAYTGGVLGTLIGADLLNLGKIKNLGAPVASIGGAGTFDGIFLSGFIALLLI

Specific function: Unknown

COG id: COG4089

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25017; Mature: 24885

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRQIFYMPFSLRFLFLLIIITIFGLGSLFLGVIVSAFMKIGFSAEDALLILFLSLLGSG
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
INIPLTTLKSDIPVVKDNYIKFFGISYRIPTRQIVRNETLLAINVGGAVIPVLISAYLLT
CCCCHHHHHCCCCCHHCCCEEEEEEEEECCHHHHHCCCCEEEEECCCHHHHHHHHHHHHH
QFPSSLLLAGAGVAIVAIVTHSVARPIKGVGIATPALIPPLTSVLSAVLLTSIVHIPGCP
HCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
AEPCRVIIAYTGGVLGTLIGADLLNLGKIKNLGAPVASIGGAGTFDGIFLSGFIALLLI
CHHHEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SRQIFYMPFSLRFLFLLIIITIFGLGSLFLGVIVSAFMKIGFSAEDALLILFLSLLGSG
CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
INIPLTTLKSDIPVVKDNYIKFFGISYRIPTRQIVRNETLLAINVGGAVIPVLISAYLLT
CCCCHHHHHCCCCCHHCCCEEEEEEEEECCHHHHHCCCCEEEEECCCHHHHHHHHHHHHH
QFPSSLLLAGAGVAIVAIVTHSVARPIKGVGIATPALIPPLTSVLSAVLLTSIVHIPGCP
HCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
AEPCRVIIAYTGGVLGTLIGADLLNLGKIKNLGAPVASIGGAGTFDGIFLSGFIALLLI
CHHHEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA