Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227920

Identifier: 21227920

GI number: 21227920

Start: 2169138

End: 2170013

Strand: Reverse

Name: 21227920

Synonym: MM_1818

Alternate gene names: NA

Gene position: 2170013-2169138 (Counterclockwise)

Preceding gene: 21227927

Following gene: 21227919

Centisome position: 52.97

GC content: 46.0

Gene sequence:

>876_bases
ATGGAAAGAGCACGTGTAATTGCAGAAGCGGCAGCCCATATTTCCCGGGAACTCGGTGCTGCCGCAATTATGGTCTCCGG
AGATTTGAATTTTGAAGGGATTGAAACCGGAGAAATTCCTGTATATTATATTTCCATGCGCCCTAAAAGCATAATAGACC
ACCTCGTAGCAACCAGCAAAGATGGAAAAAGTCCTGTAAAAGAACTGGGTGATCAGCTCACCAGGGAAGCTTCGGGAAAT
GTTGAATACGTGCAGCATGCCGCAGCTATAGAATACGCACTTGAAGGCCCCAAAAACGGGATTGTGGTAGGGGTTATTGA
AACCCGCGGGTCCAGCTCCATTATAGTCCATAACCTGGATGACAACCCTCTCATAAAAGCTATGAAAGAATGTGAAGAGA
GAGTCAACCCTGAAGTAATGAATGCAGTCCTGAAAATCGCTTTTGATATCGCCCTTACGGGCAGGGAAGGAAAAAAAATA
GGGGCTGCCTTTATTGTGGGTGACTCCGAAGAAGTCCTTAAACGCTCTCACCAGATAATCCTTAACCCTTATGAAGGCCA
TGAGGAAGCCCACAGAAACATACTCGACAGAAGAAACTGGGAGTCTATAAAGGAGTTTGCCCTGCTTGACGGGGTTTTTG
TAATAGACGAGACTGGCATTGTCCGTGCAGCAGGGAGATACCTTGACGTGGACGGAAAAAATATAGATATTGAAAAAGGG
CTTGGTGGACGTCATGTCTCAGCAGCTGCCATCAGCAGGGATACGGTAGCAATTTCAGTTACAGTTTCAGAGTCAGGTGG
AGTCCTCAGAGTATATAAAGACGCAAAAGAAACCATTTGCATGGAGTCCTTACAACCTGCATCCAGATACGTATGA

Upstream 100 bases:

>100_bases
TTGTGTAGTGATGTTACATTTACTTTTATCACTAGATTTTGGAACTGAGTCGTAAAAAAGCAGGACTTATAAAATGATTG
CGTAAAAAGGGGTGAGTGAC

Downstream 100 bases:

>100_bases
ACCTGGAGTGCAGAAAAAATTAACTGATTTTTAATTCCCTGACTATTATTTCCGGTTCTATGGTTTTTCTCACAGTTATG
AAAAGCCCGGGATATTCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MERARVIAEAAAHISRELGAAAIMVSGDLNFEGIETGEIPVYYISMRPKSIIDHLVATSKDGKSPVKELGDQLTREASGN
VEYVQHAAAIEYALEGPKNGIVVGVIETRGSSSIIVHNLDDNPLIKAMKECEERVNPEVMNAVLKIAFDIALTGREGKKI
GAAFIVGDSEEVLKRSHQIILNPYEGHEEAHRNILDRRNWESIKEFALLDGVFVIDETGIVRAAGRYLDVDGKNIDIEKG
LGGRHVSAAAISRDTVAISVTVSESGGVLRVYKDAKETICMESLQPASRYV

Sequences:

>Translated_291_residues
MERARVIAEAAAHISRELGAAAIMVSGDLNFEGIETGEIPVYYISMRPKSIIDHLVATSKDGKSPVKELGDQLTREASGN
VEYVQHAAAIEYALEGPKNGIVVGVIETRGSSSIIVHNLDDNPLIKAMKECEERVNPEVMNAVLKIAFDIALTGREGKKI
GAAFIVGDSEEVLKRSHQIILNPYEGHEEAHRNILDRRNWESIKEFALLDGVFVIDETGIVRAAGRYLDVDGKNIDIEKG
LGGRHVSAAAISRDTVAISVTVSESGGVLRVYKDAKETICMESLQPASRYV
>Mature_291_residues
MERARVIAEAAAHISRELGAAAIMVSGDLNFEGIETGEIPVYYISMRPKSIIDHLVATSKDGKSPVKELGDQLTREASGN
VEYVQHAAAIEYALEGPKNGIVVGVIETRGSSSIIVHNLDDNPLIKAMKECEERVNPEVMNAVLKIAFDIALTGREGKKI
GAAFIVGDSEEVLKRSHQIILNPYEGHEEAHRNILDRRNWESIKEFALLDGVFVIDETGIVRAAGRYLDVDGKNIDIEKG
LGGRHVSAAAISRDTVAISVTVSESGGVLRVYKDAKETICMESLQPASRYV

Specific function: Unknown

COG id: COG1624

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003390
- InterPro:   IPR015794
- InterPro:   IPR015795
- InterPro:   IPR014499 [H]

Pfam domain/function: PF02457 DisA_N; PF02887 PK_C [H]

EC number: NA

Molecular weight: Translated: 31647; Mature: 31647

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERARVIAEAAAHISRELGAAAIMVSGDLNFEGIETGEIPVYYISMRPKSIIDHLVATSK
CCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEEEECHHHHHHHHHHCCC
DGKSPVKELGDQLTREASGNVEYVQHAAAIEYALEGPKNGIVVGVIETRGSSSIIVHNLD
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEECC
DNPLIKAMKECEERVNPEVMNAVLKIAFDIALTGREGKKIGAAFIVGDSEEVLKRSHQII
CCHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEECCCCCEEEEEEEECCCHHHHHCCCEEE
LNPYEGHEEAHRNILDRRNWESIKEFALLDGVFVIDETGIVRAAGRYLDVDGKNIDIEKG
ECCCCCHHHHHHHHHHCCCHHHHHHHHHHCCEEEEECCCCEEECCCEEECCCCEEEEECC
LGGRHVSAAAISRDTVAISVTVSESGGVLRVYKDAKETICMESLQPASRYV
CCCCEEEHHEECCCEEEEEEEEECCCCEEEEEHHHHHHHHHHHCCHHHCCC
>Mature Secondary Structure
MERARVIAEAAAHISRELGAAAIMVSGDLNFEGIETGEIPVYYISMRPKSIIDHLVATSK
CCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEEEECHHHHHHHHHHCCC
DGKSPVKELGDQLTREASGNVEYVQHAAAIEYALEGPKNGIVVGVIETRGSSSIIVHNLD
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEECC
DNPLIKAMKECEERVNPEVMNAVLKIAFDIALTGREGKKIGAAFIVGDSEEVLKRSHQII
CCHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEECCCCCEEEEEEEECCCHHHHHCCCEEE
LNPYEGHEEAHRNILDRRNWESIKEFALLDGVFVIDETGIVRAAGRYLDVDGKNIDIEKG
ECCCCCHHHHHHHHHHCCCHHHHHHHHHHCCEEEEECCCCEEECCCEEECCCCEEEEECC
LGGRHVSAAAISRDTVAISVTVSESGGVLRVYKDAKETICMESLQPASRYV
CCCCEEEHHEECCCEEEEEEEEECCCCEEEEEHHHHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]