Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227733

Identifier: 21227733

GI number: 21227733

Start: 1945708

End: 1946331

Strand: Direct

Name: 21227733

Synonym: MM_1631

Alternate gene names: NA

Gene position: 1945708-1946331 (Clockwise)

Preceding gene: 21227732

Following gene: 21227734

Centisome position: 47.5

GC content: 46.47

Gene sequence:

>624_bases
TTGAATGGGGGTTCTAGCATTAAAGTTCTTGGATTGGTGGGTAGTCCTAAAGTCGATGGAAACACCGCGAAAATGGTTGA
TGCAATTCTGGAAGGAGCTGCAGAAAATGGGGCAGAAACCGTAATTTATAATCTTGCTTCTCTTGACATCAAAGGGTGTG
ATGCCTGCCACAGGTGCCAGGAGACTGGCTGCTGTGCTATAGATGATGATATGCAGGAGCTTTACCGGCAAATAGAGGAA
GCAGACGCCGTTGTACTCGGCTCTCCTGTATATATGTGGCAGATGACAGCCCAGACAAAACTCCTTATTGACCGCATGAC
AGCGTTTTTAAAGCCGAATTTCTCCAGCAGGCTCGACCATAAAAAATTAATTCTGGTTTTTACTCAGGGAATTCCGGACA
GGGATGCCTTCAATTCGTATTTCGAATATACAGCAGGTGTACTTTATTATCTGGGATTTGATGTTCTGGAGACAATTGTA
GCAGCAGGCACTGATAACCTTGAAGTAGCTTTCAGGCCCAGGCTGCTGGAAAAATCCCGAGAACTCGGAAAACTGATCTC
GGCTTCAAACCCTGTAAGCCCGAGGTACAGAAGAGCCGAACCGCGCCCTACACCATCTATCTGA

Upstream 100 bases:

>100_bases
CATACATACTGGCTTATTTTTTTAAATAAGAGAAACGTTTTTATCCTGATTCATCGTTTATACTTTTGTGTAAAAATGTT
TAGTATCAGATATTTAAAAT

Downstream 100 bases:

>100_bases
TTTTTCCATTTCTTCATCTCTTTCTTTTTTTATATTAACGGCTGGTAGAAAAAAGATCTTCTGGGGAAACATTTTATACC
TCTGTCCTTCCATCTTCTTA

Product: iron-sulfur flavoprotein

Products: NA

Alternate protein names: Isf-2; MCJ-2; Mj2 [H]

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MNGGSSIKVLGLVGSPKVDGNTAKMVDAILEGAAENGAETVIYNLASLDIKGCDACHRCQETGCCAIDDDMQELYRQIEE
ADAVVLGSPVYMWQMTAQTKLLIDRMTAFLKPNFSSRLDHKKLILVFTQGIPDRDAFNSYFEYTAGVLYYLGFDVLETIV
AAGTDNLEVAFRPRLLEKSRELGKLISASNPVSPRYRRAEPRPTPSI

Sequences:

>Translated_207_residues
MNGGSSIKVLGLVGSPKVDGNTAKMVDAILEGAAENGAETVIYNLASLDIKGCDACHRCQETGCCAIDDDMQELYRQIEE
ADAVVLGSPVYMWQMTAQTKLLIDRMTAFLKPNFSSRLDHKKLILVFTQGIPDRDAFNSYFEYTAGVLYYLGFDVLETIV
AAGTDNLEVAFRPRLLEKSRELGKLISASNPVSPRYRRAEPRPTPSI
>Mature_207_residues
MNGGSSIKVLGLVGSPKVDGNTAKMVDAILEGAAENGAETVIYNLASLDIKGCDACHRCQETGCCAIDDDMQELYRQIEE
ADAVVLGSPVYMWQMTAQTKLLIDRMTAFLKPNFSSRLDHKKLILVFTQGIPDRDAFNSYFEYTAGVLYYLGFDVLETIV
AAGTDNLEVAFRPRLLEKSRELGKLISASNPVSPRYRRAEPRPTPSI

Specific function: Redox-active protein probably involved in electron transport [H]

COG id: COG0655

COG function: function code R; Multimeric flavodoxin WrbA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ssuE family. Isf subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005025 [H]

Pfam domain/function: PF03358 FMN_red [H]

EC number: NA

Molecular weight: Translated: 22788; Mature: 22788

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGGSSIKVLGLVGSPKVDGNTAKMVDAILEGAAENGAETVIYNLASLDIKGCDACHRCQ
CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHCCCCCCHHHHHHH
ETGCCAIDDDMQELYRQIEEADAVVLGSPVYMWQMTAQTKLLIDRMTAFLKPNFSSRLDH
HCCCEEECHHHHHHHHHHHHCCEEEECCCEEEEEEHHHHHHHHHHHHHHHCCCCHHHCCC
KKLILVFTQGIPDRDAFNSYFEYTAGVLYYLGFDVLETIVAAGTDNLEVAFRPRLLEKSR
CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHH
ELGKLISASNPVSPRYRRAEPRPTPSI
HHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNGGSSIKVLGLVGSPKVDGNTAKMVDAILEGAAENGAETVIYNLASLDIKGCDACHRCQ
CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHCCCCCCHHHHHHH
ETGCCAIDDDMQELYRQIEEADAVVLGSPVYMWQMTAQTKLLIDRMTAFLKPNFSSRLDH
HCCCEEECHHHHHHHHHHHHCCEEEECCCEEEEEEHHHHHHHHHHHHHHHCCCCHHHCCC
KKLILVFTQGIPDRDAFNSYFEYTAGVLYYLGFDVLETIVAAGTDNLEVAFRPRLLEKSR
CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHH
ELGKLISASNPVSPRYRRAEPRPTPSI
HHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]