Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227693

Identifier: 21227693

GI number: 21227693

Start: 1895432

End: 1896337

Strand: Direct

Name: 21227693

Synonym: MM_1591

Alternate gene names: NA

Gene position: 1895432-1896337 (Clockwise)

Preceding gene: 21227692

Following gene: 21227694

Centisome position: 46.27

GC content: 40.84

Gene sequence:

>906_bases
ATGCTTGCCATATATCTCATTATTCTGATTTTTTTACTTATTTTATTTGTACTTCTCACGGCAATAGTCTTTACCTTCAA
GCTTAAGGCCCTGAGTTTGAAAGAAAAGAACGAACTGGAAGGCACAGTAACCGTTAAATGGCTCTTTTTTTCCCACACTT
TTTTAATTGGAGAACCCGGCGAGAAAAAATATTCTCCTGATGAGTCAGATATGGAGGATAAGGGAAATGAAAAAGTAATT
GAAACCGAAAATCGGCAGGACGAATCAGTACCTGAAGAAATCAAAATCAGGGATGAAGGCCGGGAAGCAGAATATAAAAT
TCAGGTAGATGAAAGCAGAGAGCCCGTAAAAGAGAGACCTGAGGAGAAAACATTTGCTCCTGAAGGTGAAGATAGAACCC
GGGCTGAAGAAAAAATCCGGGTTGAAAAGAAAAGAGGGATATTTGACCGTATAAAAGGGAAGAAAAGTTCTGCAAGGGAT
GTTGAGGTTGAAGAAGAGGACGGAATGACCATCAAGGAAAAGCTTCACTGGGGTCTGGAAGCTTACAAAGCTCTTAGAAA
GCCTCTTTTCCGACTGTTTTCTGACATGCTCAATGCAATAAAAATTAAATACCTGAAAGCTGACCTCACTTTCGGGCTTC
CGGACCCCGCGGATACAGGAATGCTTTGCGGGCTTATACATGCTATTCTGGGGACGATTTACAGCCGCTGTAGGCGCTGC
AGTTTTTCTGTCTGTCCGGTTTTTATGGAGACACTGCTGGATTTTCACGGGAGCGCGGAGATCCGTGTAAAAATATATTC
ACTGATTTTCCCATTCCTTAAATTTATATTTAACGGGAAAACTTTATCTTTTACTTATTTGATTGTTAAGGAAAAACTTC
GGGGCAGTTCGAAGATTAACTCCTAA

Upstream 100 bases:

>100_bases
TCCAGGTTAAAACTTTTTAAGGGATTTTACTGGAATCTGAATTGACGGTTAAAGTGGTCAGGATAGTCAGGACTGTCCTT
CTTCCCTCAAAATGTTCAGC

Downstream 100 bases:

>100_bases
GCTTTATGAATAAGCAATGAGGATACAGATGAATATGATTAATGTGGTGTCTCCGTCCAGACTCCATCTCACCCTTATTG
ATCTCAATGCGGAGATTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MLAIYLIILIFLLILFVLLTAIVFTFKLKALSLKEKNELEGTVTVKWLFFSHTFLIGEPGEKKYSPDESDMEDKGNEKVI
ETENRQDESVPEEIKIRDEGREAEYKIQVDESREPVKERPEEKTFAPEGEDRTRAEEKIRVEKKRGIFDRIKGKKSSARD
VEVEEEDGMTIKEKLHWGLEAYKALRKPLFRLFSDMLNAIKIKYLKADLTFGLPDPADTGMLCGLIHAILGTIYSRCRRC
SFSVCPVFMETLLDFHGSAEIRVKIYSLIFPFLKFIFNGKTLSFTYLIVKEKLRGSSKINS

Sequences:

>Translated_301_residues
MLAIYLIILIFLLILFVLLTAIVFTFKLKALSLKEKNELEGTVTVKWLFFSHTFLIGEPGEKKYSPDESDMEDKGNEKVI
ETENRQDESVPEEIKIRDEGREAEYKIQVDESREPVKERPEEKTFAPEGEDRTRAEEKIRVEKKRGIFDRIKGKKSSARD
VEVEEEDGMTIKEKLHWGLEAYKALRKPLFRLFSDMLNAIKIKYLKADLTFGLPDPADTGMLCGLIHAILGTIYSRCRRC
SFSVCPVFMETLLDFHGSAEIRVKIYSLIFPFLKFIFNGKTLSFTYLIVKEKLRGSSKINS
>Mature_301_residues
MLAIYLIILIFLLILFVLLTAIVFTFKLKALSLKEKNELEGTVTVKWLFFSHTFLIGEPGEKKYSPDESDMEDKGNEKVI
ETENRQDESVPEEIKIRDEGREAEYKIQVDESREPVKERPEEKTFAPEGEDRTRAEEKIRVEKKRGIFDRIKGKKSSARD
VEVEEEDGMTIKEKLHWGLEAYKALRKPLFRLFSDMLNAIKIKYLKADLTFGLPDPADTGMLCGLIHAILGTIYSRCRRC
SFSVCPVFMETLLDFHGSAEIRVKIYSLIFPFLKFIFNGKTLSFTYLIVKEKLRGSSKINS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34768; Mature: 34768

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAIYLIILIFLLILFVLLTAIVFTFKLKALSLKEKNELEGTVTVKWLFFSHTFLIGEPG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEEEECCC
EKKYSPDESDMEDKGNEKVIETENRQDESVPEEIKIRDEGREAEYKIQVDESREPVKERP
CCCCCCCCCCHHCCCCCCEEECCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCHHHCC
EEKTFAPEGEDRTRAEEKIRVEKKRGIFDRIKGKKSSARDVEVEEEDGMTIKEKLHWGLE
CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHH
AYKALRKPLFRLFSDMLNAIKIKYLKADLTFGLPDPADTGMLCGLIHAILGTIYSRCRRC
HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHC
SFSVCPVFMETLLDFHGSAEIRVKIYSLIFPFLKFIFNGKTLSFTYLIVKEKLRGSSKIN
CCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCEEEEEHEEHHHHHCCCCCCC
S
C
>Mature Secondary Structure
MLAIYLIILIFLLILFVLLTAIVFTFKLKALSLKEKNELEGTVTVKWLFFSHTFLIGEPG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEEEECCC
EKKYSPDESDMEDKGNEKVIETENRQDESVPEEIKIRDEGREAEYKIQVDESREPVKERP
CCCCCCCCCCHHCCCCCCEEECCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCHHHCC
EEKTFAPEGEDRTRAEEKIRVEKKRGIFDRIKGKKSSARDVEVEEEDGMTIKEKLHWGLE
CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHH
AYKALRKPLFRLFSDMLNAIKIKYLKADLTFGLPDPADTGMLCGLIHAILGTIYSRCRRC
HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHC
SFSVCPVFMETLLDFHGSAEIRVKIYSLIFPFLKFIFNGKTLSFTYLIVKEKLRGSSKIN
CCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCEEEEEHEEHHHHHCCCCCCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA