| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is fae-hps [H]
Identifier: 21227381
GI number: 21227381
Start: 1514605
End: 1515783
Strand: Reverse
Name: fae-hps [H]
Synonym: MM_1279
Alternate gene names: 21227381
Gene position: 1515783-1514605 (Counterclockwise)
Preceding gene: 21227382
Following gene: 21227380
Centisome position: 37.0
GC content: 49.62
Gene sequence:
>1179_bases ATGTTTCAGATAGGAGAAGCATTAATGGGGCAGGGCTCAGAACTTGCCCACGTTGATTTGATGATAGGAGACAAGGGAGG TCCAGTAGGGCAGGCTTTTGCAAACGGCCTTACCCAGCTTTCAGCCGGGCACACCCCTCTCCTTTCAGTTATCAGGCCAA ATCTGCCGCCCAAGCCTTCAACCCTTATTATCCCGAAGGTCACTGTAAAAAACATGGACCAGGCAGCTAGGATTTTCGGA CCTGCCCAGTCAGCTGTTGCAAAAGCAGTAGCAGACTCCGTGGAAGAAGGCGTGATCCCGAAGGACCAGGTTGAAGACCT TGTTATTGTGGCAAGCGTTTTTATCCACCCTGAAGCCCAGGACTACAATAAAATCTACAGGTACAACTACGGAGCCACAA AACTCGCAATAAAGAGGGCACTTGAAGGCTTCCCTGACATCGACACTGTACTTGAGGAAAGCAACAAGTCCACACATGCT ATCATGGGATTCAAAGTTACAAGGCTCTGGGACCCACCATATCTGCAGATTGCCTTTGACAACCCGAACCTTGAGTTCGT GCTCTCGGCTATCTCGGAAATCCCGAAGAGCGACCACGTAATCATCGAAGCAGGCACGCCACTTATCAAGCGCTACGGCA CAGATGTTATTTCCAAGATCAGGCAGGTAAGACCGGATGCATTCATCGTTGCTGACTTGAAGACTCTGGACACCGGAAAC CTTGAAGCCAGAATGGTTGCAGACGCCGCAGGTGACGCTATTGTAGTTTCAGCCCTTGCTCCTATCAGCACCATTGATAA ACTTATTGAGGAAGCCCACAAGACCGGAATCTACGCGGTTATGGACACCCTTAATCAGCAGGATCCGATTTCTGTCTTAA AGCAGCTCAAAGTCATGCCAGATGTCATTGAGCTTCACCGTGGAATCGATATTGAAGGCACAGAACACGCCTGGGGCAAT ATTGGAGAAATCAAAAAGATCGCTCCAAAGGCTCTGGTTGCAGTTGCAGGTGGAGTCCGCCTCGACAAGGTTCCTGTAGC CCTCAGCCAGGGTGCTGATATCCTTGTGGTCGGACGTGCAATCACCAATGCAAAAGACGTCAGGGAAATGGCTGAACAGT TTATCAACAGCCTTAATAAGCCAGAGATTGACCAGTTCAGAGTCATGACAGACTTCTGA
Upstream 100 bases:
>100_bases AAACATCATTCTTTACATTGTACTCTCAAAATTCAATACTCTGCACAGTGTATATCATCAGTAATCTGCATCTCACATTT ACCATTTCGCGAGGTTAAAC
Downstream 100 bases:
>100_bases AAGCGTGTATTTTCACGCTTTTTCTTTTCTTTTTTCAGGAGGGGATTTTTTTGGGTTCACCATTCATTTTACTGAACTAT AAGACTTATATACAGGGCAC
Product: bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase
Products: NA
Alternate protein names: Formaldehyde-activating enzyme; Fae; 3-hexulose-6-phosphate synthase; HPS; D-arabino-3-hexulose-6-phosphate formaldehyde lyase [H]
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MFQIGEALMGQGSELAHVDLMIGDKGGPVGQAFANGLTQLSAGHTPLLSVIRPNLPPKPSTLIIPKVTVKNMDQAARIFG PAQSAVAKAVADSVEEGVIPKDQVEDLVIVASVFIHPEAQDYNKIYRYNYGATKLAIKRALEGFPDIDTVLEESNKSTHA IMGFKVTRLWDPPYLQIAFDNPNLEFVLSAISEIPKSDHVIIEAGTPLIKRYGTDVISKIRQVRPDAFIVADLKTLDTGN LEARMVADAAGDAIVVSALAPISTIDKLIEEAHKTGIYAVMDTLNQQDPISVLKQLKVMPDVIELHRGIDIEGTEHAWGN IGEIKKIAPKALVAVAGGVRLDKVPVALSQGADILVVGRAITNAKDVREMAEQFINSLNKPEIDQFRVMTDF
Sequences:
>Translated_392_residues MFQIGEALMGQGSELAHVDLMIGDKGGPVGQAFANGLTQLSAGHTPLLSVIRPNLPPKPSTLIIPKVTVKNMDQAARIFG PAQSAVAKAVADSVEEGVIPKDQVEDLVIVASVFIHPEAQDYNKIYRYNYGATKLAIKRALEGFPDIDTVLEESNKSTHA IMGFKVTRLWDPPYLQIAFDNPNLEFVLSAISEIPKSDHVIIEAGTPLIKRYGTDVISKIRQVRPDAFIVADLKTLDTGN LEARMVADAAGDAIVVSALAPISTIDKLIEEAHKTGIYAVMDTLNQQDPISVLKQLKVMPDVIELHRGIDIEGTEHAWGN IGEIKKIAPKALVAVAGGVRLDKVPVALSQGADILVVGRAITNAKDVREMAEQFINSLNKPEIDQFRVMTDF >Mature_392_residues MFQIGEALMGQGSELAHVDLMIGDKGGPVGQAFANGLTQLSAGHTPLLSVIRPNLPPKPSTLIIPKVTVKNMDQAARIFG PAQSAVAKAVADSVEEGVIPKDQVEDLVIVASVFIHPEAQDYNKIYRYNYGATKLAIKRALEGFPDIDTVLEESNKSTHA IMGFKVTRLWDPPYLQIAFDNPNLEFVLSAISEIPKSDHVIIEAGTPLIKRYGTDVISKIRQVRPDAFIVADLKTLDTGN LEARMVADAAGDAIVVSALAPISTIDKLIEEAHKTGIYAVMDTLNQQDPISVLKQLKVMPDVIELHRGIDIEGTEHAWGN IGEIKKIAPKALVAVAGGVRLDKVPVALSQGADILVVGRAITNAKDVREMAEQFINSLNKPEIDQFRVMTDF
Specific function: Catalyzes the formation of ribulose-5-phosphate and formaldehyde from 3-hexulose-6-phosphate [H]
COG id: COG0269
COG function: function code G; 3-hexulose-6-phosphate synthase and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the HPS/KGPDC family. HPS subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790006, Length=205, Percent_Identity=24.390243902439, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1790640, Length=213, Percent_Identity=26.2910798122066, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR020868 - InterPro: IPR014826 - InterPro: IPR001754 - InterPro: IPR020568 - InterPro: IPR011060 [H]
Pfam domain/function: PF08714 Fae; PF00215 OMPdecase [H]
EC number: =4.1.2.43 [H]
Molecular weight: Translated: 42447; Mature: 42447
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQIGEALMGQGSELAHVDLMIGDKGGPVGQAFANGLTQLSAGHTPLLSVIRPNLPPKPS CCCCCCHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCC TLIIPKVTVKNMDQAARIFGPAQSAVAKAVADSVEEGVIPKDQVEDLVIVASVFIHPEAQ EEEECCHHHHCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEHHHHCCCCCC DYNKIYRYNYGATKLAIKRALEGFPDIDTVLEESNKSTHAIMGFKVTRLWDPPYLQIAFD CCCHHEEECCCHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEEEEEEECCCCEEEEEEC NPNLEFVLSAISEIPKSDHVIIEAGTPLIKRYGTDVISKIRQVRPDAFIVADLKTLDTGN CCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHCHHHHHHHHHCCCCEEEEEEEEECCCCC LEARMVADAAGDAIVVSALAPISTIDKLIEEAHKTGIYAVMDTLNQQDPISVLKQLKVMP CCEEEEECCCCCEEEEHHHCCHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHCH DVIELHRGIDIEGTEHAWGNIGEIKKIAPKALVAVAGGVRLDKVPVALSQGADILVVGRA HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEECCCCCHHCCCCCEEEECCH ITNAKDVREMAEQFINSLNKPEIDQFRVMTDF HCCHHHHHHHHHHHHHHCCCCCCHHEEEEECC >Mature Secondary Structure MFQIGEALMGQGSELAHVDLMIGDKGGPVGQAFANGLTQLSAGHTPLLSVIRPNLPPKPS CCCCCCHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCC TLIIPKVTVKNMDQAARIFGPAQSAVAKAVADSVEEGVIPKDQVEDLVIVASVFIHPEAQ EEEECCHHHHCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEHHHHCCCCCC DYNKIYRYNYGATKLAIKRALEGFPDIDTVLEESNKSTHAIMGFKVTRLWDPPYLQIAFD CCCHHEEECCCHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEEEEEEECCCCEEEEEEC NPNLEFVLSAISEIPKSDHVIIEAGTPLIKRYGTDVISKIRQVRPDAFIVADLKTLDTGN CCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHCHHHHHHHHHCCCCEEEEEEEEECCCCC LEARMVADAAGDAIVVSALAPISTIDKLIEEAHKTGIYAVMDTLNQQDPISVLKQLKVMP CCEEEEECCCCCEEEEHHHCCHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHCH DVIELHRGIDIEGTEHAWGNIGEIKKIAPKALVAVAGGVRLDKVPVALSQGADILVVGRA HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEECCCCCHHCCCCCEEEECCH ITNAKDVREMAEQFINSLNKPEIDQFRVMTDF HCCHHHHHHHHHHHHHHCCCCCCHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]