Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227220

Identifier: 21227220

GI number: 21227220

Start: 1313567

End: 1315489

Strand: Direct

Name: 21227220

Synonym: MM_1118

Alternate gene names: NA

Gene position: 1313567-1315489 (Clockwise)

Preceding gene: 21227217

Following gene: 21227221

Centisome position: 32.07

GC content: 44.72

Gene sequence:

>1923_bases
TTGAATCCACTCAAATTCCAATCCCAACCCAAAGGTGATACGATGCTAAAAAGACAGATAGGAACCCTATTCCTAATAAC
GTGCCTTATTTTAACAGCCGTACCCGCTGCGTTAGGCGCACAGAATACAGTAACTGTAAATCCTGCATCTGGCTCAGATG
CCCAGACTGCAATTAATAACGCAATAAACTCCGTAGCAGCAGGAGCAACATCAAGCAACCCGGGAGTGGTTATTCTCGGT
GCTGGCACTTATAAGATAAGTGCACCTATAATTTTGAAATCCAATGTAGTACTGAAAGGTGCGGGCGACAATACAATAAT
CTTTGCTACCGGCTCAGTCTGTAACTCAGATGGATCACCTGCCTACATATACGGATCAGGTGTTTCTAACGTAGAAGTAT
CTCATCTTCAGTTCCAGAGTACAGCAACAGGACCTAAAGATGGAGGGCACGGAGACTACCGGAACTGCATAAAATTGACG
TCTGTAACCAATGCTAAGGTACATGATATCTTACTGACTCGTTATCTATATGGTGACGGTGTCAGAATCAGTAAGAGTTC
TGGAATAGAAGTATATAACTGCAGGATGCAGTCTTCAGGACACGATGGAGTGTCATTTTTATCCGGCACTAAAGATTCCA
GAATGTACAACTGTTATGTTGAGGTTCAGACCAACACAGGTGTCAGGGTAGACAACTGTGCAAATATAGAGGTAGATCAC
AACACCTTCACAGGTAGCGCCGGGTCCGGATGGTGCTGTGTTGAGCTGGAAAACAAACTGACAAATGTGGATGTCCATCA
CAACATTATGCATGATTACAAAGGATCAAGCAGCAGCGCAGGCATTGGTAACTGGCACGCAAGCGGGTCGATTAGCGTTC
GTGATAATGTAATGTGGAACGTGTCACCTTACATCCAGGTGGGCTCAGGTTCAAACATATTAGGACCATCTGACCGCAGC
GTTGAGAACTGGGTAGCCAAAGGATACGGCTATGGATCTCTTGGAAGTGCATCGAGCTCACAGAGTACAGAAACTGTAAG
CCCGACATCCGAGGAAGATTCCAAGACGACTGCTAATGAAACTGCTGTAACAGAGACAGAAGAAACCGAACTTGCTACGG
AAACAAAAGAAACTGAAGTTGCAACAGCTAATAACCAGACAGCAGAGAATGAAACTGCAATAACGAAAGCTGCTCCAGAA
CAGGTTACTGGAACTGATAACGAATCACTGACAGAAGAGAATATATCTGAGACAGGCACCCAGACAGGAGTTAATGAGCC
TCCTGTAACAGAGGCTGATCCTGAACAGGTGGTTGAAACTGATAAGACATCATTGACAGAAGAGAATTCATCAGACATTA
TAGACAATCGCCTCAAGGAATCCACACCTGATACGGTTTATCAGGACAAAGAATATCTCGACATCGGAGGCAGACCTGGA
ATAGGAAAGTACAGAGACCTGCTTTTATTTAATCTTAGCGAATACAACGATGCAGAAAATATTAGCAACGCCACTCTGTC
TCTCTACTGGTACTATCCCGATGGAATTGAAAGGCCAGAGGACACAATCGTAGAAGTATACAGACCAGCTGCAGCCTGGA
ACCCTGAAAATGTAACCTGGAACACCAGGGACAATGGGGTGCTCTGGACACAGCCCGGAGGAGACTGGTTTGACATGAAT
AACGTCTCTCAGGGAGATGCGCCATATGCCACAATAACTATTAAGGGCAGTGATATACCGGATAACAGGTACTACGAGCT
GAACGTAACAGACCTCGTAAAAGAGTATGTCAGCGGCGAATACGAAAACACAGGGTTCCTTATAAAAACTCGTGCTGAGA
ATGCAGACTATGTAGCATTCTACAGCAGTGAAATTGATGATGAAAACCAGCGCCCAATGCTGGCCATAGAAGAAAAAATA
TAA

Upstream 100 bases:

>100_bases
GATGCCTGAAATTAAGAAGGAAACCCTATTCCTGACAGCATGTTCTCGTCTAACGTTCGTATGTGCTTTGGGGAAATATA
CTGAAACCCAATAAAACTTT

Downstream 100 bases:

>100_bases
TCTGGCACCCTTAATTGAAAGAGACAACTTGAAAAATCCGGTGTTTGTGAGATTATAAAAATCTCCTTACCGGATATTTC
AGTTTCTCCTCTCTGCTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 640; Mature: 640

Protein sequence:

>640_residues
MNPLKFQSQPKGDTMLKRQIGTLFLITCLILTAVPAALGAQNTVTVNPASGSDAQTAINNAINSVAAGATSSNPGVVILG
AGTYKISAPIILKSNVVLKGAGDNTIIFATGSVCNSDGSPAYIYGSGVSNVEVSHLQFQSTATGPKDGGHGDYRNCIKLT
SVTNAKVHDILLTRYLYGDGVRISKSSGIEVYNCRMQSSGHDGVSFLSGTKDSRMYNCYVEVQTNTGVRVDNCANIEVDH
NTFTGSAGSGWCCVELENKLTNVDVHHNIMHDYKGSSSSAGIGNWHASGSISVRDNVMWNVSPYIQVGSGSNILGPSDRS
VENWVAKGYGYGSLGSASSSQSTETVSPTSEEDSKTTANETAVTETEETELATETKETEVATANNQTAENETAITKAAPE
QVTGTDNESLTEENISETGTQTGVNEPPVTEADPEQVVETDKTSLTEENSSDIIDNRLKESTPDTVYQDKEYLDIGGRPG
IGKYRDLLLFNLSEYNDAENISNATLSLYWYYPDGIERPEDTIVEVYRPAAAWNPENVTWNTRDNGVLWTQPGGDWFDMN
NVSQGDAPYATITIKGSDIPDNRYYELNVTDLVKEYVSGEYENTGFLIKTRAENADYVAFYSSEIDDENQRPMLAIEEKI

Sequences:

>Translated_640_residues
MNPLKFQSQPKGDTMLKRQIGTLFLITCLILTAVPAALGAQNTVTVNPASGSDAQTAINNAINSVAAGATSSNPGVVILG
AGTYKISAPIILKSNVVLKGAGDNTIIFATGSVCNSDGSPAYIYGSGVSNVEVSHLQFQSTATGPKDGGHGDYRNCIKLT
SVTNAKVHDILLTRYLYGDGVRISKSSGIEVYNCRMQSSGHDGVSFLSGTKDSRMYNCYVEVQTNTGVRVDNCANIEVDH
NTFTGSAGSGWCCVELENKLTNVDVHHNIMHDYKGSSSSAGIGNWHASGSISVRDNVMWNVSPYIQVGSGSNILGPSDRS
VENWVAKGYGYGSLGSASSSQSTETVSPTSEEDSKTTANETAVTETEETELATETKETEVATANNQTAENETAITKAAPE
QVTGTDNESLTEENISETGTQTGVNEPPVTEADPEQVVETDKTSLTEENSSDIIDNRLKESTPDTVYQDKEYLDIGGRPG
IGKYRDLLLFNLSEYNDAENISNATLSLYWYYPDGIERPEDTIVEVYRPAAAWNPENVTWNTRDNGVLWTQPGGDWFDMN
NVSQGDAPYATITIKGSDIPDNRYYELNVTDLVKEYVSGEYENTGFLIKTRAENADYVAFYSSEIDDENQRPMLAIEEKI
>Mature_640_residues
MNPLKFQSQPKGDTMLKRQIGTLFLITCLILTAVPAALGAQNTVTVNPASGSDAQTAINNAINSVAAGATSSNPGVVILG
AGTYKISAPIILKSNVVLKGAGDNTIIFATGSVCNSDGSPAYIYGSGVSNVEVSHLQFQSTATGPKDGGHGDYRNCIKLT
SVTNAKVHDILLTRYLYGDGVRISKSSGIEVYNCRMQSSGHDGVSFLSGTKDSRMYNCYVEVQTNTGVRVDNCANIEVDH
NTFTGSAGSGWCCVELENKLTNVDVHHNIMHDYKGSSSSAGIGNWHASGSISVRDNVMWNVSPYIQVGSGSNILGPSDRS
VENWVAKGYGYGSLGSASSSQSTETVSPTSEEDSKTTANETAVTETEETELATETKETEVATANNQTAENETAITKAAPE
QVTGTDNESLTEENISETGTQTGVNEPPVTEADPEQVVETDKTSLTEENSSDIIDNRLKESTPDTVYQDKEYLDIGGRPG
IGKYRDLLLFNLSEYNDAENISNATLSLYWYYPDGIERPEDTIVEVYRPAAAWNPENVTWNTRDNGVLWTQPGGDWFDMN
NVSQGDAPYATITIKGSDIPDNRYYELNVTDLVKEYVSGEYENTGFLIKTRAENADYVAFYSSEIDDENQRPMLAIEEKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69116; Mature: 69116

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPLKFQSQPKGDTMLKRQIGTLFLITCLILTAVPAALGAQNTVTVNPASGSDAQTAINN
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHH
AINSVAAGATSSNPGVVILGAGTYKISAPIILKSNVVLKGAGDNTIIFATGSVCNSDGSP
HHHHHHCCCCCCCCCEEEECCCCEEEECCEEEECCEEEEECCCCEEEEEECCEECCCCCE
AYIYGSGVSNVEVSHLQFQSTATGPKDGGHGDYRNCIKLTSVTNAKVHDILLTRYLYGDG
EEEEECCCCCEEEEEEEEECCCCCCCCCCCCCHHHEEEEEECCCCHHHHHHHHHHHCCCC
VRISKSSGIEVYNCRMQSSGHDGVSFLSGTKDSRMYNCYVEVQTNTGVRVDNCANIEVDH
EEEECCCCCEEEEEEECCCCCCCHHHHCCCCCCEEEEEEEEEECCCCEEECCCEEEEECC
NTFTGSAGSGWCCVELENKLTNVDVHHNIMHDYKGSSSSAGIGNWHASGSISVRDNVMWN
CEEECCCCCCEEEEEECCCCEEEEHHHHHHHHCCCCCCCCCCCCEECCCEEEEECCEEEE
VSPYIQVGSGSNILGPSDRSVENWVAKGYGYGSLGSASSSQSTETVSPTSEEDSKTTANE
CCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TAVTETEETELATETKETEVATANNQTAENETAITKAAPEQVTGTDNESLTEENISETGT
CEECCCCHHHHHHCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHCCC
QTGVNEPPVTEADPEQVVETDKTSLTEENSSDIIDNRLKESTPDTVYQDKEYLDIGGRPG
CCCCCCCCCCCCCHHHHHHCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCC
IGKYRDLLLFNLSEYNDAENISNATLSLYWYYPDGIERPEDTIVEVYRPAAAWNPENVTW
CCCCEEEEEEECHHCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCEE
NTRDNGVLWTQPGGDWFDMNNVSQGDAPYATITIKGSDIPDNRYYELNVTDLVKEYVSGE
CCCCCCEEEECCCCCEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEEHHHHHHHHHCCC
YENTGFLIKTRAENADYVAFYSSEIDDENQRPMLAIEEKI
CCCCCEEEEEECCCCCEEEEEECCCCCCCCCCEEEEECCC
>Mature Secondary Structure
MNPLKFQSQPKGDTMLKRQIGTLFLITCLILTAVPAALGAQNTVTVNPASGSDAQTAINN
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHH
AINSVAAGATSSNPGVVILGAGTYKISAPIILKSNVVLKGAGDNTIIFATGSVCNSDGSP
HHHHHHCCCCCCCCCEEEECCCCEEEECCEEEECCEEEEECCCCEEEEEECCEECCCCCE
AYIYGSGVSNVEVSHLQFQSTATGPKDGGHGDYRNCIKLTSVTNAKVHDILLTRYLYGDG
EEEEECCCCCEEEEEEEEECCCCCCCCCCCCCHHHEEEEEECCCCHHHHHHHHHHHCCCC
VRISKSSGIEVYNCRMQSSGHDGVSFLSGTKDSRMYNCYVEVQTNTGVRVDNCANIEVDH
EEEECCCCCEEEEEEECCCCCCCHHHHCCCCCCEEEEEEEEEECCCCEEECCCEEEEECC
NTFTGSAGSGWCCVELENKLTNVDVHHNIMHDYKGSSSSAGIGNWHASGSISVRDNVMWN
CEEECCCCCCEEEEEECCCCEEEEHHHHHHHHCCCCCCCCCCCCEECCCEEEEECCEEEE
VSPYIQVGSGSNILGPSDRSVENWVAKGYGYGSLGSASSSQSTETVSPTSEEDSKTTANE
CCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TAVTETEETELATETKETEVATANNQTAENETAITKAAPEQVTGTDNESLTEENISETGT
CEECCCCHHHHHHCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHCCC
QTGVNEPPVTEADPEQVVETDKTSLTEENSSDIIDNRLKESTPDTVYQDKEYLDIGGRPG
CCCCCCCCCCCCCHHHHHHCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCC
IGKYRDLLLFNLSEYNDAENISNATLSLYWYYPDGIERPEDTIVEVYRPAAAWNPENVTW
CCCCEEEEEEECHHCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCEE
NTRDNGVLWTQPGGDWFDMNNVSQGDAPYATITIKGSDIPDNRYYELNVTDLVKEYVSGE
CCCCCCEEEECCCCCEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEEHHHHHHHHHCCC
YENTGFLIKTRAENADYVAFYSSEIDDENQRPMLAIEEKI
CCCCCEEEEEECCCCCEEEEEECCCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA