Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227078

Identifier: 21227078

GI number: 21227078

Start: 1156103

End: 1157836

Strand: Reverse

Name: 21227078

Synonym: MM_0976

Alternate gene names: NA

Gene position: 1157836-1156103 (Counterclockwise)

Preceding gene: 21227083

Following gene: 21227076

Centisome position: 28.27

GC content: 45.44

Gene sequence:

>1734_bases
GTGCATGGAGAGGGAGGGTCTTCAGGATCTGAACAGGAAACTTCTGATTCACTGCCTCAAGAAAACGTTTTATCTAATAA
AGAGATCTCATACTCTGTCTCGTCTATTTTGAAACAGACTGATCACGATTCGAGAATAACTTCTAAAAAAACAATTGAAA
ATAAAAAAGAAACTGAAGAAGCCTTGGAAGCATATGTTCAGCTCTTTCCCGGTACAGGTGCAGAAGTCCTGGCTCCTCTT
TCCGAGCTTAAAGAATGGGACGAAGATTCCAGTATAGCTGCAGTCTGCGTTAAACCGGGATCAATTGAAGAGCTCTACTC
TCTTGAAGGCGTGCGTTCTGTCGAGCTGGCTGTTCCTCCCGTTATCAGAAAAATTGAGAGGGGAGATAAAGAGTCTCTTT
CTTCATGGAGCTTCTGGAAACAGGGCGGTATAAGTGGAACCGGAATTAAAATAGGGATAATTTCCGATGGAGTAGAAGAC
ATCTCTGAAGCTGATAGATCGGGAGCCCTTCCTGAAAGCGTGCATGTCCTTTCTCCGGGAAAAGGAACTGAAGGGACTGT
AATACTCGAAGTAGTCCATAAGGTGTCTCCGGGTGCAGAACTTTACTTCCACAGCGCAGGAAACAACAAGCTTGAATTTA
ACAGGGCAATTGACGCTCTTATCGCCGAAGGCTGCCAGATTATCTGCGATGACGTTGGCTGGCCTGACGAACCTTTTTTT
GAAGATGGTATTGTAGCTTCTCATGTCAGAGAGGTTATTGAAAGACAGGATATTCTTTATGTGAGCGCAGCAGGCAACGA
TGCAGGGCGTCATTATCAGGGAATGTTTTTTGACAATGGGTCAGGCTGGCATGATTTCAGCTCAGGGACCAGTGATTCCA
GAAATATTTATATGGACGTACCTCAGGGAGAAAAAATAACTGTAGTTCTTCAGTGGAATGACCCCTGGAACTGCTCCGAA
AACGACTATGACCTCTATCTGTGTGACCGCTGCAGCGGGGAAGAACTGGATGCAAGTGAAAAGGTTCAGGGCGGCACAGA
AAAACCTCTCGAATACATTCAGTACACCAATATGGAAGACACCATAAAAAAAGTGAACATTTCAGTTAAAAAACACTGCG
GGCAGGACAGGATGCTGGAGATTTATATTTACGGAAACTCTTCAGTAAAGATCCATCCGGATAATCTGGTTGAGGAGGAC
TCTGTATTCGGGCACCCTGCCGTCCAGGATGTTATCTGTGTTGGAGCGGTTGATTCTGGAAATTTGCAGAAAAGCATAGC
GTCATACTCCTCTCGCGGTCCTGTAAGCATTTACTACCCTGAGTACGAGTTAAGGAACAAGATAGACCTTAGCGGGCCCG
GGAGTGTGAGAGTTTCAGGCACAAACGGGAAGGGAAGCCTTTTTGCAGGTACAAGTGCTTCTGCTCCATCCGTAGCGGGA
ATCGGGGCTCTTGTCTGGAGCATGTGCCCTGAAAAAAACAGCAGTGAAATACGCGAGATCCTGTGTTTTTCAGCCGAAGA
CCTTGGAGATCCGGGTTATGATACCGTTTTCGGGCACGGCTCTGTCAATAGCAACACAGCTCATTCTCTAAAAAAACTTT
ACGCAGATTCCAGCTTATCATCGAAAACATATGGAGTCTCATCTGCAGAAACAAGAGGAACATTTTCACTGAAAAATTCC
ATACCCTTTGAACAGCTCTGCTCTCTCGCAAAATTGTCTTCGAGAGACAGGTAA

Upstream 100 bases:

>100_bases
ATCGGGGGTAGTGTATCTGGGGAGTTACACCGCAAAAATACTTTATTTATTAACGCTGGCTACGGTATTTACATGTCTAC
TTTTTTCTACCAGTTTTGTA

Downstream 100 bases:

>100_bases
AGGGACTTCTCAGGCGAAAAGGCAGTTTACCGATCCCAGGGGTGAATTTCCTGCCGGGATTCATTCTCAGGTTCATTCAG
CAAGATTTTCACTCCAAAAG

Product: putative protease

Products: NA

Alternate protein names: Cell Surface Protein; Fibronectin Type III Domain-Containing Protein; Proprotein Convertase P; TPR Repeat-Containing Protein; Protease; Subtilisin-Like Serine Protease; Peptidase Families S8 And

Number of amino acids: Translated: 577; Mature: 577

Protein sequence:

>577_residues
MHGEGGSSGSEQETSDSLPQENVLSNKEISYSVSSILKQTDHDSRITSKKTIENKKETEEALEAYVQLFPGTGAEVLAPL
SELKEWDEDSSIAAVCVKPGSIEELYSLEGVRSVELAVPPVIRKIERGDKESLSSWSFWKQGGISGTGIKIGIISDGVED
ISEADRSGALPESVHVLSPGKGTEGTVILEVVHKVSPGAELYFHSAGNNKLEFNRAIDALIAEGCQIICDDVGWPDEPFF
EDGIVASHVREVIERQDILYVSAAGNDAGRHYQGMFFDNGSGWHDFSSGTSDSRNIYMDVPQGEKITVVLQWNDPWNCSE
NDYDLYLCDRCSGEELDASEKVQGGTEKPLEYIQYTNMEDTIKKVNISVKKHCGQDRMLEIYIYGNSSVKIHPDNLVEED
SVFGHPAVQDVICVGAVDSGNLQKSIASYSSRGPVSIYYPEYELRNKIDLSGPGSVRVSGTNGKGSLFAGTSASAPSVAG
IGALVWSMCPEKNSSEIREILCFSAEDLGDPGYDTVFGHGSVNSNTAHSLKKLYADSSLSSKTYGVSSAETRGTFSLKNS
IPFEQLCSLAKLSSRDR

Sequences:

>Translated_577_residues
MHGEGGSSGSEQETSDSLPQENVLSNKEISYSVSSILKQTDHDSRITSKKTIENKKETEEALEAYVQLFPGTGAEVLAPL
SELKEWDEDSSIAAVCVKPGSIEELYSLEGVRSVELAVPPVIRKIERGDKESLSSWSFWKQGGISGTGIKIGIISDGVED
ISEADRSGALPESVHVLSPGKGTEGTVILEVVHKVSPGAELYFHSAGNNKLEFNRAIDALIAEGCQIICDDVGWPDEPFF
EDGIVASHVREVIERQDILYVSAAGNDAGRHYQGMFFDNGSGWHDFSSGTSDSRNIYMDVPQGEKITVVLQWNDPWNCSE
NDYDLYLCDRCSGEELDASEKVQGGTEKPLEYIQYTNMEDTIKKVNISVKKHCGQDRMLEIYIYGNSSVKIHPDNLVEED
SVFGHPAVQDVICVGAVDSGNLQKSIASYSSRGPVSIYYPEYELRNKIDLSGPGSVRVSGTNGKGSLFAGTSASAPSVAG
IGALVWSMCPEKNSSEIREILCFSAEDLGDPGYDTVFGHGSVNSNTAHSLKKLYADSSLSSKTYGVSSAETRGTFSLKNS
IPFEQLCSLAKLSSRDR
>Mature_577_residues
MHGEGGSSGSEQETSDSLPQENVLSNKEISYSVSSILKQTDHDSRITSKKTIENKKETEEALEAYVQLFPGTGAEVLAPL
SELKEWDEDSSIAAVCVKPGSIEELYSLEGVRSVELAVPPVIRKIERGDKESLSSWSFWKQGGISGTGIKIGIISDGVED
ISEADRSGALPESVHVLSPGKGTEGTVILEVVHKVSPGAELYFHSAGNNKLEFNRAIDALIAEGCQIICDDVGWPDEPFF
EDGIVASHVREVIERQDILYVSAAGNDAGRHYQGMFFDNGSGWHDFSSGTSDSRNIYMDVPQGEKITVVLQWNDPWNCSE
NDYDLYLCDRCSGEELDASEKVQGGTEKPLEYIQYTNMEDTIKKVNISVKKHCGQDRMLEIYIYGNSSVKIHPDNLVEED
SVFGHPAVQDVICVGAVDSGNLQKSIASYSSRGPVSIYYPEYELRNKIDLSGPGSVRVSGTNGKGSLFAGTSASAPSVAG
IGALVWSMCPEKNSSEIREILCFSAEDLGDPGYDTVFGHGSVNSNTAHSLKKLYADSSLSSKTYGVSSAETRGTFSLKNS
IPFEQLCSLAKLSSRDR

Specific function: Unknown

COG id: COG1404

COG function: function code O; Subtilisin-like serine proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62603; Mature: 62603

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: PS00138 SUBTILASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHGEGGSSGSEQETSDSLPQENVLSNKEISYSVSSILKQTDHDSRITSKKTIENKKETEE
CCCCCCCCCCCCCHHHCCCHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHH
ALEAYVQLFPGTGAEVLAPLSELKEWDEDSSIAAVCVKPGSIEELYSLEGVRSVELAVPP
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHCCCCEEEECCCH
VIRKIERGDKESLSSWSFWKQGGISGTGIKIGIISDGVEDISEADRSGALPESVHVLSPG
HHHHHHCCCHHHHCCCHHHHCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCEEEECCC
KGTEGTVILEVVHKVSPGAELYFHSAGNNKLEFNRAIDALIAEGCQIICDDVGWPDEPFF
CCCCCEEEEEEHHHCCCCCEEEEECCCCCEEEHHHHHHHHHHCCCEEEECCCCCCCCCCC
EDGIVASHVREVIERQDILYVSAAGNDAGRHYQGMFFDNGSGWHDFSSGTSDSRNIYMDV
CCCHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEC
PQGEKITVVLQWNDPWNCSENDYDLYLCDRCSGEELDASEKVQGGTEKPLEYIQYTNMED
CCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCHHHHCCCCCCCHHHHHHCCHHH
TIKKVNISVKKHCGQDRMLEIYIYGNSSVKIHPDNLVEEDSVFGHPAVQDVICVGAVDSG
HHHHHCCHHHHHCCCCCEEEEEEEECCEEEECCCCCCCCCCCCCCCCHHHEEEEECCCCC
NLQKSIASYSSRGPVSIYYPEYELRNKIDLSGPGSVRVSGTNGKGSLFAGTSASAPSVAG
HHHHHHHHHCCCCCEEEECCCHHHCCEECCCCCCCEEEECCCCCCCEEECCCCCCCCHHH
IGALVWSMCPEKNSSEIREILCFSAEDLGDPGYDTVFGHGSVNSNTAHSLKKLYADSSLS
HHHHHHHHCCCCCHHHHHHHHHHCHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCC
SKTYGVSSAETRGTFSLKNSIPFEQLCSLAKLSSRDR
CCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MHGEGGSSGSEQETSDSLPQENVLSNKEISYSVSSILKQTDHDSRITSKKTIENKKETEE
CCCCCCCCCCCCCHHHCCCHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHH
ALEAYVQLFPGTGAEVLAPLSELKEWDEDSSIAAVCVKPGSIEELYSLEGVRSVELAVPP
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHCCCCEEEECCCH
VIRKIERGDKESLSSWSFWKQGGISGTGIKIGIISDGVEDISEADRSGALPESVHVLSPG
HHHHHHCCCHHHHCCCHHHHCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCEEEECCC
KGTEGTVILEVVHKVSPGAELYFHSAGNNKLEFNRAIDALIAEGCQIICDDVGWPDEPFF
CCCCCEEEEEEHHHCCCCCEEEEECCCCCEEEHHHHHHHHHHCCCEEEECCCCCCCCCCC
EDGIVASHVREVIERQDILYVSAAGNDAGRHYQGMFFDNGSGWHDFSSGTSDSRNIYMDV
CCCHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEC
PQGEKITVVLQWNDPWNCSENDYDLYLCDRCSGEELDASEKVQGGTEKPLEYIQYTNMED
CCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCHHHHCCCCCCCHHHHHHCCHHH
TIKKVNISVKKHCGQDRMLEIYIYGNSSVKIHPDNLVEEDSVFGHPAVQDVICVGAVDSG
HHHHHCCHHHHHCCCCCEEEEEEEECCEEEECCCCCCCCCCCCCCCCHHHEEEEECCCCC
NLQKSIASYSSRGPVSIYYPEYELRNKIDLSGPGSVRVSGTNGKGSLFAGTSASAPSVAG
HHHHHHHHHCCCCCEEEECCCHHHCCEECCCCCCCEEEECCCCCCCEEECCCCCCCCHHH
IGALVWSMCPEKNSSEIREILCFSAEDLGDPGYDTVFGHGSVNSNTAHSLKKLYADSSLS
HHHHHHHHCCCCCHHHHHHHHHHCHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCC
SKTYGVSSAETRGTFSLKNSIPFEQLCSLAKLSSRDR
CCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA