Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226840

Identifier: 21226840

GI number: 21226840

Start: 885592

End: 885975

Strand: Direct

Name: 21226840

Synonym: MM_0738

Alternate gene names: NA

Gene position: 885592-885975 (Clockwise)

Preceding gene: 21226839

Following gene: 21226843

Centisome position: 21.62

GC content: 48.18

Gene sequence:

>384_bases
ATGGCAGAAGAAACAAAATGTTCATGCGGCTCGGCAAATGTCGGAATCTTTGCCTGCAGCGGAGCGTCCAACGTCGGTCA
GATAGCGAACAAAATTGCAGTCGAACTTACAAAGCAGGAAGTCGGGAAAATGATGTGCACCGTCGGGATTGGCGGCAGGA
TCAACGGGCTCCTGAAATCGGCCGAAGGTTCCGAGAGGCTTATAGCTATTGACGGCTGCCCCTTAAACTGCACGAAAGAG
ACCCTTGAACTTGCAGGATTTACCCCGGACAGGCATATTGTGATCTCCGAGTTAGGAATCAAAAAGAACAAAGATCTGGA
TCTTAAAGACGAAGAAGTTAAGGAAGCAAGGGACAAAGTAAAAGAGATACTGCAATCCGAGTGA

Upstream 100 bases:

>100_bases
TGACGGAGACGTCAAAGTCGCAGGAAAAGTCCCAAGCGTGGAAGACATCAAGAAATGGATCACCAAATGAGAGTCACTAA
ACAAACAGGAGAGAAAAATA

Downstream 100 bases:

>100_bases
CACCCATATTTTCGTTATACTTTTTATCTTAGGTGACCTCATCACACATTCGTTATACTTTTTTATCTTTACACATTTTT
TTCTCTATATCTTTTTTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: DGC Domain-Containing Protein; Lipoprotein; DGC Domain Superfamily; Dgc Domain Protein; Lipoprotein COG

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MAEETKCSCGSANVGIFACSGASNVGQIANKIAVELTKQEVGKMMCTVGIGGRINGLLKSAEGSERLIAIDGCPLNCTKE
TLELAGFTPDRHIVISELGIKKNKDLDLKDEEVKEARDKVKEILQSE

Sequences:

>Translated_127_residues
MAEETKCSCGSANVGIFACSGASNVGQIANKIAVELTKQEVGKMMCTVGIGGRINGLLKSAEGSERLIAIDGCPLNCTKE
TLELAGFTPDRHIVISELGIKKNKDLDLKDEEVKEARDKVKEILQSE
>Mature_126_residues
AEETKCSCGSANVGIFACSGASNVGQIANKIAVELTKQEVGKMMCTVGIGGRINGLLKSAEGSERLIAIDGCPLNCTKET
LELAGFTPDRHIVISELGIKKNKDLDLKDEEVKEARDKVKEILQSE

Specific function: Unknown

COG id: COG4273

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13553; Mature: 13422

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEETKCSCGSANVGIFACSGASNVGQIANKIAVELTKQEVGKMMCTVGIGGRINGLLKS
CCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHC
AEGSERLIAIDGCPLNCTKETLELAGFTPDRHIVISELGIKKNKDLDLKDEEVKEARDKV
CCCCCEEEEECCCCCCCCHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHH
KEILQSE
HHHHCCC
>Mature Secondary Structure 
AEETKCSCGSANVGIFACSGASNVGQIANKIAVELTKQEVGKMMCTVGIGGRINGLLKS
CCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHC
AEGSERLIAIDGCPLNCTKETLELAGFTPDRHIVISELGIKKNKDLDLKDEEVKEARDKV
CCCCCEEEEECCCCCCCCHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHH
KEILQSE
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA