| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226843
Identifier: 21226843
GI number: 21226843
Start: 887928
End: 888815
Strand: Direct
Name: 21226843
Synonym: MM_0741
Alternate gene names: NA
Gene position: 887928-888815 (Clockwise)
Preceding gene: 21226840
Following gene: 21226844
Centisome position: 21.68
GC content: 43.24
Gene sequence:
>888_bases TTGATTGAAACTGTACTTGTTCCTGTAGACTTTACCATTGAAAAGGAAGACTTGCTTGGCTGCATAGGGGAATTTAAAAA TGCGGGATTGAAGAAGGTTATTCTTCTGCACGTTGTGGACATACATAAAAGCCAGGGGCTTGCCCCCATGTTTGAGAGAA ATGCAAAGAAAAGAATTGAGGACTACACGGGCTTTGCAGAGGAACTGGGGCTTGAAACCGAAGCTCTGGTAGTGGTAGGA GATATTAAGAGGACAATTTCAGAAACCGCGGACCGGAAAAATGTTGATGCCATAATAATGGGAGCCACAGCTAAGGGATT CATAAAAGGAAGATTTCTTGGGAGGACTACGGAACACATTGCACGCAGTTCAAAGAAGATTCTGCTTGTTGAGAAGTACG ATGCCCTGAAAGAAGGGAAAGAATTTTATAAAAATGCATGCAGGGCAACTTTCTCAAGGGTTCTTGTGCCTCTTGATTTT TCGAAAGAGTCAATGAAAGCGATAGAGCAGCTTCAGGAATTTGGGGGGATAGTAAAAGAAGTCCTGCTCCTGCACGTAAT AGATAACATAAAAGACATGGATTTGCTGGATGAACAGAGAGAAGAAGCAAAAGGAAAACTAGGGAGAATAAAAGAGCAGC TTACTGGCATAAAGAGCCAGTACCTTGTTGTTGAGGGCATCCCATCCGACGAAATTGTCAAATTTGCAAACATAGAAGAG GCCACTATGATTATGCTGACTTCCCGTGGGAAAGGGGATTTGATAGACCTGATACTCGGGAGCACGGCAGAAAGCGTTCT CCGAAAAACCATAAAACCCGTATTAATTATCCCTGCGAGCAAAGAATTTGATGGAGAAGAGTGGGACGAAGGAGAAGAGT ATGCCTGA
Upstream 100 bases:
>100_bases GCACACCTTATTTATATTGACAGAAGAATACTATTAAAAGGGGCTTTAACGGGAAGGCTCGATTAAAATGTTATTATAGC CTGAAACAGGGGGAATCGGA
Downstream 100 bases:
>100_bases GGGAACTGAAGAAAGGGAGCTCGACTTTTTCAGTAAATACCTATCTATCTGGGTTGCGGTCTGCATCATACTCGGAACCG CACTGGGATATGCTTTTCCA
Product: universal stress protein
Products: NA
Alternate protein names: USP MJ0577 [H]
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MIETVLVPVDFTIEKEDLLGCIGEFKNAGLKKVILLHVVDIHKSQGLAPMFERNAKKRIEDYTGFAEELGLETEALVVVG DIKRTISETADRKNVDAIIMGATAKGFIKGRFLGRTTEHIARSSKKILLVEKYDALKEGKEFYKNACRATFSRVLVPLDF SKESMKAIEQLQEFGGIVKEVLLLHVIDNIKDMDLLDEQREEAKGKLGRIKEQLTGIKSQYLVVEGIPSDEIVKFANIEE ATMIMLTSRGKGDLIDLILGSTAESVLRKTIKPVLIIPASKEFDGEEWDEGEEYA
Sequences:
>Translated_295_residues MIETVLVPVDFTIEKEDLLGCIGEFKNAGLKKVILLHVVDIHKSQGLAPMFERNAKKRIEDYTGFAEELGLETEALVVVG DIKRTISETADRKNVDAIIMGATAKGFIKGRFLGRTTEHIARSSKKILLVEKYDALKEGKEFYKNACRATFSRVLVPLDF SKESMKAIEQLQEFGGIVKEVLLLHVIDNIKDMDLLDEQREEAKGKLGRIKEQLTGIKSQYLVVEGIPSDEIVKFANIEE ATMIMLTSRGKGDLIDLILGSTAESVLRKTIKPVLIIPASKEFDGEEWDEGEEYA >Mature_295_residues MIETVLVPVDFTIEKEDLLGCIGEFKNAGLKKVILLHVVDIHKSQGLAPMFERNAKKRIEDYTGFAEELGLETEALVVVG DIKRTISETADRKNVDAIIMGATAKGFIKGRFLGRTTEHIARSSKKILLVEKYDALKEGKEFYKNACRATFSRVLVPLDF SKESMKAIEQLQEFGGIVKEVLLLHVIDNIKDMDLLDEQREEAKGKLGRIKEQLTGIKSQYLVVEGIPSDEIVKFANIEE ATMIMLTSRGKGDLIDLILGSTAESVLRKTIKPVLIIPASKEFDGEEWDEGEEYA
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 32974; Mature: 32974
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIETVLVPVDFTIEKEDLLGCIGEFKNAGLKKVILLHVVDIHKSQGLAPMFERNAKKRIE CCCEEEEECCCEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH DYTGFAEELGLETEALVVVGDIKRTISETADRKNVDAIIMGATAKGFIKGRFLGRTTEHI HHCCHHHHHCCCCEEEEEEHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHECCCCHHHHH ARSSKKILLVEKYDALKEGKEFYKNACRATFSRVLVPLDFSKESMKAIEQLQEFGGIVKE HCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHH VLLLHVIDNIKDMDLLDEQREEAKGKLGRIKEQLTGIKSQYLVVEGIPSDEIVKFANIEE HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHEECCCCCC ATMIMLTSRGKGDLIDLILGSTAESVLRKTIKPVLIIPASKEFDGEEWDEGEEYA EEEEEEECCCCCCCHHHHHCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MIETVLVPVDFTIEKEDLLGCIGEFKNAGLKKVILLHVVDIHKSQGLAPMFERNAKKRIE CCCEEEEECCCEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH DYTGFAEELGLETEALVVVGDIKRTISETADRKNVDAIIMGATAKGFIKGRFLGRTTEHI HHCCHHHHHCCCCEEEEEEHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHECCCCHHHHH ARSSKKILLVEKYDALKEGKEFYKNACRATFSRVLVPLDFSKESMKAIEQLQEFGGIVKE HCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHH VLLLHVIDNIKDMDLLDEQREEAKGKLGRIKEQLTGIKSQYLVVEGIPSDEIVKFANIEE HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHEECCCCCC ATMIMLTSRGKGDLIDLILGSTAESVLRKTIKPVLIIPASKEFDGEEWDEGEEYA EEEEEEECCCCCCCHHHHHCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087; 9860944 [H]