| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226839
Identifier: 21226839
GI number: 21226839
Start: 885319
End: 885561
Strand: Direct
Name: 21226839
Synonym: MM_0737
Alternate gene names: NA
Gene position: 885319-885561 (Clockwise)
Preceding gene: 21226838
Following gene: 21226840
Centisome position: 21.61
GC content: 41.56
Gene sequence:
>243_bases GTGAAATACATGAAAATCGAAATACTGGGTACTGGATGTGCCAAATGCAAAAAAACAAAGGAACTGGCAGAAAAAGCAGT CAAAGAACTGGGCGTTGATGCTGAAATTGTCAAGGTAGAGGATTTTGATAAAATTCTTGGATATGGAGTTATGGTCACGC CTGCCCTTGTTATTGACGGAGACGTCAAAGTCGCAGGAAAAGTCCCAAGCGTGGAAGACATCAAGAAATGGATCACCAAA TGA
Upstream 100 bases:
>100_bases TACTGAAACAAACAAGATCTAAATAACCCTAAGAAGAAATGAAGGCTAGAGATCAAATAAAAAAATGATAGAGAATAAAT AAAATTAATAAAATGTTCAG
Downstream 100 bases:
>100_bases GAGTCACTAAACAAACAGGAGAGAAAAATAATGGCAGAAGAAACAAAATGTTCATGCGGCTCGGCAAATGTCGGAATCTT TGCCTGCAGCGGAGCGTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 80
Protein sequence:
>80_residues MKYMKIEILGTGCAKCKKTKELAEKAVKELGVDAEIVKVEDFDKILGYGVMVTPALVIDGDVKVAGKVPSVEDIKKWITK
Sequences:
>Translated_80_residues MKYMKIEILGTGCAKCKKTKELAEKAVKELGVDAEIVKVEDFDKILGYGVMVTPALVIDGDVKVAGKVPSVEDIKKWITK >Mature_80_residues MKYMKIEILGTGCAKCKKTKELAEKAVKELGVDAEIVKVEDFDKILGYGVMVTPALVIDGDVKVAGKVPSVEDIKKWITK
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutaredoxin family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003501 - InterPro: IPR005243 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF02302 PTS_IIB [H]
EC number: NA
Molecular weight: Translated: 8755; Mature: 8755
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYMKIEILGTGCAKCKKTKELAEKAVKELGVDAEIVKVEDFDKILGYGVMVTPALVIDG CCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCCEECCEEEECC DVKVAGKVPSVEDIKKWITK CEEEECCCCCHHHHHHHHCC >Mature Secondary Structure MKYMKIEILGTGCAKCKKTKELAEKAVKELGVDAEIVKVEDFDKILGYGVMVTPALVIDG CCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCCEECCEEEECC DVKVAGKVPSVEDIKKWITK CEEEECCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]