Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695260

Identifier: 209695260

GI number: 209695260

Start: 1899903

End: 1901024

Strand: Reverse

Name: 209695260

Synonym: VSAL_I1783

Alternate gene names: NA

Gene position: 1901024-1899903 (Counterclockwise)

Preceding gene: 209695261

Following gene: 209695259

Centisome position: 57.17

GC content: 44.56

Gene sequence:

>1122_bases
ATGCCACTGATGGAGATTAATAAGCAAAGACGGAGCTTATTGAAAGGTGGTGTTGGGGTGGTTACGTTGTCCCCTTGGTT
AGCCGCTTGCTCTGCAATCAATACTCATGAGAAAAATGGTTCGCCATCACTGATCTCTTGTGCTCGTACTGCTAATGGGC
ACTTTAATGCGATTGTGGCTGACAGCGAGGGACTTCCTATTCATGCTATTCCTTTACCTGAAAGAGGGCATGGTGTTGCA
ATAAGCCCTGATGGTTCGCTCGCGGTTGCGTTTGCTCGTAGGCCCGGCAGTTATATGCAATTGTTTACTGTTAAAACGGG
TGAGAGTTTTTCAATTACCGCGGCGATGCCTAATCGCTATTTTTATGGTCACGGTGTGTTTTCTTCTGATGGTAAGAGGT
TGTATGTCACTGAGGGAGAGAAAAAGACCAGTAAAGGAATTGTAGGTGTTTACCACCTTTCAAATAATCAGTTAACGAAA
GTGCATGAATTCACGGATTTTGGAATTGGTCCTCACGAAATTATAAAAGTCGATGACACCACATTGGCCATTGGGGTTGG
TGGTGTGCATACCAAAGACAGAGAGCCGATGAATATTGAAACGATGATTCCTGCATTGGTGTATCTGTCTACGGTTACGG
GGGAGGTTCTTGAAAGCGTAGGGCTAGCTGATCATAAGTTAAGTATTCGCCATTTATCATTAACGGATGATGGGCGAGTA
TTGTGTGGGCAACAATACCGTGGTGAACCCGAAGATGGAATGCCGTTAGTGGCCATCCATGAACGTGGTAAACCGTTAGT
TCAATTAAATGCAGAACCAGAAGAATGGCTTAGATTTAATCATTACATTGCCAGTATCGCTGTATTGGGTGATCACGTGA
TTGCAACCTCTCCTAGGGGGAATTGCTATGGTGTGTGGGATTTAAAACAAAATACTTTGGTTGAGATTGTGACTTTAGTT
GATGCCTCTGGTGTGGTGGTAAGTCGTAATCATCAAGATGTCCCACGATGGTATATCAGTTCAGGTGCCGGAAAGGTGGT
TGGGCGAACCGAAAGTGGCGAGGTTGAAAGCCATCAAACAAGGGTGATGTGGGATAATCATTGGAGTAAAATTCTGGTCT
GA

Upstream 100 bases:

>100_bases
GGATACCAACAAACCCTCTCTTTATACAATAAGTTAGAGTATTTGAAATACTTAATCCATGAAGAAGTTGCCATCGAATT
GAACATCGCAATAGGATTTA

Downstream 100 bases:

>100_bases
ATTCCACTTAAATAATAGTCATGTTATTCTTAGGATAATTCATTTAAGAAGAGATAAACATGAGCTTACAATATCAAATT
ATTCCGGTTACTGCTTATGA

Product: lipoprotein

Products: NA

Alternate protein names: Secreted Protein; Lipoprotein; Tat Pathway Signal Sequence Domain-Containing Protein

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MPLMEINKQRRSLLKGGVGVVTLSPWLAACSAINTHEKNGSPSLISCARTANGHFNAIVADSEGLPIHAIPLPERGHGVA
ISPDGSLAVAFARRPGSYMQLFTVKTGESFSITAAMPNRYFYGHGVFSSDGKRLYVTEGEKKTSKGIVGVYHLSNNQLTK
VHEFTDFGIGPHEIIKVDDTTLAIGVGGVHTKDREPMNIETMIPALVYLSTVTGEVLESVGLADHKLSIRHLSLTDDGRV
LCGQQYRGEPEDGMPLVAIHERGKPLVQLNAEPEEWLRFNHYIASIAVLGDHVIATSPRGNCYGVWDLKQNTLVEIVTLV
DASGVVVSRNHQDVPRWYISSGAGKVVGRTESGEVESHQTRVMWDNHWSKILV

Sequences:

>Translated_373_residues
MPLMEINKQRRSLLKGGVGVVTLSPWLAACSAINTHEKNGSPSLISCARTANGHFNAIVADSEGLPIHAIPLPERGHGVA
ISPDGSLAVAFARRPGSYMQLFTVKTGESFSITAAMPNRYFYGHGVFSSDGKRLYVTEGEKKTSKGIVGVYHLSNNQLTK
VHEFTDFGIGPHEIIKVDDTTLAIGVGGVHTKDREPMNIETMIPALVYLSTVTGEVLESVGLADHKLSIRHLSLTDDGRV
LCGQQYRGEPEDGMPLVAIHERGKPLVQLNAEPEEWLRFNHYIASIAVLGDHVIATSPRGNCYGVWDLKQNTLVEIVTLV
DASGVVVSRNHQDVPRWYISSGAGKVVGRTESGEVESHQTRVMWDNHWSKILV
>Mature_372_residues
PLMEINKQRRSLLKGGVGVVTLSPWLAACSAINTHEKNGSPSLISCARTANGHFNAIVADSEGLPIHAIPLPERGHGVAI
SPDGSLAVAFARRPGSYMQLFTVKTGESFSITAAMPNRYFYGHGVFSSDGKRLYVTEGEKKTSKGIVGVYHLSNNQLTKV
HEFTDFGIGPHEIIKVDDTTLAIGVGGVHTKDREPMNIETMIPALVYLSTVTGEVLESVGLADHKLSIRHLSLTDDGRVL
CGQQYRGEPEDGMPLVAIHERGKPLVQLNAEPEEWLRFNHYIASIAVLGDHVIATSPRGNCYGVWDLKQNTLVEIVTLVD
ASGVVVSRNHQDVPRWYISSGAGKVVGRTESGEVESHQTRVMWDNHWSKILV

Specific function: Unknown

COG id: COG3490

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40673; Mature: 40542

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLMEINKQRRSLLKGGVGVVTLSPWLAACSAINTHEKNGSPSLISCARTANGHFNAIVA
CCCHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEE
DSEGLPIHAIPLPERGHGVAISPDGSLAVAFARRPGSYMQLFTVKTGESFSITAAMPNRY
CCCCCEEEEEECCCCCCEEEECCCCCEEEEEECCCCCEEEEEEEECCCCEEEEEECCCCE
FYGHGVFSSDGKRLYVTEGEKKTSKGIVGVYHLSNNQLTKVHEFTDFGIGPHEIIKVDDT
EEECCEECCCCCEEEEECCCCCCCCCEEEEEEECCCCEEEEEEHHHCCCCHHHEEEECCC
TLAIGVGGVHTKDREPMNIETMIPALVYLSTVTGEVLESVGLADHKLSIRHLSLTDDGRV
EEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCE
LCGQQYRGEPEDGMPLVAIHERGKPLVQLNAEPEEWLRFNHYIASIAVLGDHVIATSPRG
EECCCCCCCCCCCCCEEEEECCCCEEEEECCCHHHHHHHHHHHEEEEEECCEEEEECCCC
NCYGVWDLKQNTLVEIVTLVDASGVVVSRNHQDVPRWYISSGAGKVVGRTESGEVESHQT
CEEEEEECCCCCEEEEEEEECCCCEEEECCCCCCCEEEEECCCCEEEECCCCCCCCCCEE
RVMWDNHWSKILV
EEEECCCCEEECC
>Mature Secondary Structure 
PLMEINKQRRSLLKGGVGVVTLSPWLAACSAINTHEKNGSPSLISCARTANGHFNAIVA
CCHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEE
DSEGLPIHAIPLPERGHGVAISPDGSLAVAFARRPGSYMQLFTVKTGESFSITAAMPNRY
CCCCCEEEEEECCCCCCEEEECCCCCEEEEEECCCCCEEEEEEEECCCCEEEEEECCCCE
FYGHGVFSSDGKRLYVTEGEKKTSKGIVGVYHLSNNQLTKVHEFTDFGIGPHEIIKVDDT
EEECCEECCCCCEEEEECCCCCCCCCEEEEEEECCCCEEEEEEHHHCCCCHHHEEEECCC
TLAIGVGGVHTKDREPMNIETMIPALVYLSTVTGEVLESVGLADHKLSIRHLSLTDDGRV
EEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCE
LCGQQYRGEPEDGMPLVAIHERGKPLVQLNAEPEEWLRFNHYIASIAVLGDHVIATSPRG
EECCCCCCCCCCCCCEEEEECCCCEEEEECCCHHHHHHHHHHHEEEEEECCEEEEECCCC
NCYGVWDLKQNTLVEIVTLVDASGVVVSRNHQDVPRWYISSGAGKVVGRTESGEVESHQT
CEEEEEECCCCCEEEEEEEECCCCEEEECCCCCCCEEEEECCCCEEEECCCCCCCCCCEE
RVMWDNHWSKILV
EEEECCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA