| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is 209694577
Identifier: 209694577
GI number: 209694577
Start: 1115754
End: 1115882
Strand: Direct
Name: 209694577
Synonym: VSAL_I1016
Alternate gene names: NA
Gene position: 1115754-1115882 (Clockwise)
Preceding gene: 209694576
Following gene: 209694578
Centisome position: 33.55
GC content: 41.86
Gene sequence:
>129_bases ATGAACAAAGATAAGTTCTTAGCGAAGATGTCCATTGCATTTATGCAGAACCACGGCGTTGCACCAACCGAAAGCCAATT AGATGGCTGGTTAGAAGTGTATGCAGTACTTGAAAGTAAAGGGGAATAG
Upstream 100 bases:
>100_bases TTTCTTCTTCGTGCCGTTCGGTTGCCCAGCAATCAATGATGCAAACATGGTGGCGTGATTTTGAGCCAGAACACGGCTCG CCAATGTTGGAGTCAATCTA
Downstream 100 bases:
>100_bases AGATGAGTAAATCATGTAATTGTTTTGAAGAAACCCGCAATAAAGCAAAAGAACATATTAGAGCTAAGTTACCAAGAGAC ATCGTTGATTTTTCTGTAAG
Product: phage protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 42; Mature: 42
Protein sequence:
>42_residues MNKDKFLAKMSIAFMQNHGVAPTESQLDGWLEVYAVLESKGE
Sequences:
>Translated_42_residues MNKDKFLAKMSIAFMQNHGVAPTESQLDGWLEVYAVLESKGE >Mature_42_residues MNKDKFLAKMSIAFMQNHGVAPTESQLDGWLEVYAVLESKGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4714; Mature: 4714
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.1 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.1 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKDKFLAKMSIAFMQNHGVAPTESQLDGWLEVYAVLESKGE CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNKDKFLAKMSIAFMQNHGVAPTESQLDGWLEVYAVLESKGE CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA