| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
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The map label for this gene is MiaB [H]
Identifier: 20807443
GI number: 20807443
Start: 967016
End: 968329
Strand: Direct
Name: MiaB [H]
Synonym: TTE0962
Alternate gene names: 20807443
Gene position: 967016-968329 (Clockwise)
Preceding gene: 20807440
Following gene: 20807444
Centisome position: 35.96
GC content: 36.91
Gene sequence:
>1314_bases GTGGCAAAAGTTGCATTTTACACTTTGGGATGCAAAGTGAATCAATATGAGACAGAAGTCATGGCAGAGCTTTTTAGAAA AGCCGGATATGAAATTGTAGATTTTGATGAAATAGCAGATGTGTATGTAATAAACACCTGCAGTGTTACTGCGAGAAGTG ATATGAAGTCGAGGCAGATGATAAGAAAGACGAGGAATAAGAATCCAGATGCAATAGTGGTGGCAGTGGGTTGTTATGTT CAAGTAAGCCCTGATGAAGTTTTTTCAATGCCTGAAGTGGATATAGTAATAGGCACAAAGGATAAAGATAAAATAGTTGA TTTGGTGAAAGATTTTGAAAATGAGAAAAAGAAAACTAAGCTAATAGAAAATATAATGAAACAGAGAGATTATGAAGAGT TTGGTATTACTGGGTACACAGAGAGGACAAGGGCTTATATAAAAATTGAGGATGGCTGCAACCAATACTGCACGTACTGC ATCATTCCTTATGCCAGAGGGCCAGTTAGGAGCAGAAAGCCAGAAAACATAATAAAAGAGGTCAAGAAGTACGCAGAACA TGGGTATAAAGAAATAGTTCTCACAGGTATACACATTGCTTCTTACGGCAGGGACCTTAAAAATATAGGGCTTTTGGATG TAATAAAAATGGTTCACGAAGTAGAAGGAATAGAAAGGATAAGGATAAGTTCTATTGAACCCACCTTTTTGACAGAAGAT GTGGTAAAAGAATTAGCAAATCTTCCTAAAATGTGCAGGCATTATCACGTGTCTCTTCAGAGCGGATGTGATGAAACGTT GAAAAGAATGGGAAGAAAATACACAGCTTCTGAGTATAAAGAAGTGGTGGAGAGGCTAAGAAGGTACATTCCTGATGTTG CGATAACTACAGACATAATGGTGGGATTTCCTGGGGAGACAGAGGAGGAGTTTGAAAAGAGCTATAAATTTGCTGAGGAG ATATGCTTTGCTAAAATGCACGTATTCAAGTATTCTCGGAGGAAGGGCACAAGAGCGTATAATTTTCCGAATCAGGTCCC AAATAAAGTAAAAGAAGAAAGGAGCAAAAAGCTTTTACAGCTCTCTAAAGTTTGTGAGAGAAAGTTTAAGGAAAGATTTT TAAATAGGACAGTAGAAGTTCTGTTTGAGCAGAAGGTAAAAGATTTAGATGGATATGTGGAAGGGCTTACAGACAATTAC CTTAGTGTGGCAGTTAAAGGAGAATTAGAAAATTTGAGAAACCGCATCTTGCCTGTTAGAGTAAAGGAAATAAAAAATGA TTTATTGATAGGAGAAATTGAAGGAATTTATTAA
Upstream 100 bases:
>100_bases TCTTTAAAATAAAAGTACAGTTTTGTTAATTTTAACAGCGATAGCTTTCTTAATATGTGGTATAATATAAAAAGACTTCA AAGGGAGGAGTATTGGGAAA
Downstream 100 bases:
>100_bases GATGTGTAGAATATAAAAAGAGGAGGTGAAAAAGGTGTCGGAATGCATTTTCTGCAAAATAGTAAACAAAGAAGTTCCTT CTAATATAGTGTATGAGGAT
Product: 2-methylthioadenine synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MAKVAFYTLGCKVNQYETEVMAELFRKAGYEIVDFDEIADVYVINTCSVTARSDMKSRQMIRKTRNKNPDAIVVAVGCYV QVSPDEVFSMPEVDIVIGTKDKDKIVDLVKDFENEKKKTKLIENIMKQRDYEEFGITGYTERTRAYIKIEDGCNQYCTYC IIPYARGPVRSRKPENIIKEVKKYAEHGYKEIVLTGIHIASYGRDLKNIGLLDVIKMVHEVEGIERIRISSIEPTFLTED VVKELANLPKMCRHYHVSLQSGCDETLKRMGRKYTASEYKEVVERLRRYIPDVAITTDIMVGFPGETEEEFEKSYKFAEE ICFAKMHVFKYSRRKGTRAYNFPNQVPNKVKEERSKKLLQLSKVCERKFKERFLNRTVEVLFEQKVKDLDGYVEGLTDNY LSVAVKGELENLRNRILPVRVKEIKNDLLIGEIEGIY
Sequences:
>Translated_437_residues MAKVAFYTLGCKVNQYETEVMAELFRKAGYEIVDFDEIADVYVINTCSVTARSDMKSRQMIRKTRNKNPDAIVVAVGCYV QVSPDEVFSMPEVDIVIGTKDKDKIVDLVKDFENEKKKTKLIENIMKQRDYEEFGITGYTERTRAYIKIEDGCNQYCTYC IIPYARGPVRSRKPENIIKEVKKYAEHGYKEIVLTGIHIASYGRDLKNIGLLDVIKMVHEVEGIERIRISSIEPTFLTED VVKELANLPKMCRHYHVSLQSGCDETLKRMGRKYTASEYKEVVERLRRYIPDVAITTDIMVGFPGETEEEFEKSYKFAEE ICFAKMHVFKYSRRKGTRAYNFPNQVPNKVKEERSKKLLQLSKVCERKFKERFLNRTVEVLFEQKVKDLDGYVEGLTDNY LSVAVKGELENLRNRILPVRVKEIKNDLLIGEIEGIY >Mature_436_residues AKVAFYTLGCKVNQYETEVMAELFRKAGYEIVDFDEIADVYVINTCSVTARSDMKSRQMIRKTRNKNPDAIVVAVGCYVQ VSPDEVFSMPEVDIVIGTKDKDKIVDLVKDFENEKKKTKLIENIMKQRDYEEFGITGYTERTRAYIKIEDGCNQYCTYCI IPYARGPVRSRKPENIIKEVKKYAEHGYKEIVLTGIHIASYGRDLKNIGLLDVIKMVHEVEGIERIRISSIEPTFLTEDV VKELANLPKMCRHYHVSLQSGCDETLKRMGRKYTASEYKEVVERLRRYIPDVAITTDIMVGFPGETEEEFEKSYKFAEEI CFAKMHVFKYSRRKGTRAYNFPNQVPNKVKEERSKKLLQLSKVCERKFKERFLNRTVEVLFEQKVKDLDGYVEGLTDNYL SVAVKGELENLRNRILPVRVKEIKNDLLIGEIEGIY
Specific function: Unknown
COG id: COG0621
COG function: function code J; 2-methylthioadenine synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 TRAM domain [H]
Homologues:
Organism=Homo sapiens, GI28872784, Length=459, Percent_Identity=27.0152505446623, Blast_Score=163, Evalue=4e-40, Organism=Homo sapiens, GI28872782, Length=459, Percent_Identity=27.0152505446623, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI93277076, Length=366, Percent_Identity=29.2349726775956, Blast_Score=157, Evalue=1e-38, Organism=Escherichia coli, GI1786882, Length=441, Percent_Identity=29.4784580498866, Blast_Score=218, Evalue=5e-58, Organism=Escherichia coli, GI1787057, Length=393, Percent_Identity=27.735368956743, Blast_Score=160, Evalue=1e-40, Organism=Caenorhabditis elegans, GI17553146, Length=439, Percent_Identity=27.5626423690205, Blast_Score=164, Evalue=6e-41, Organism=Caenorhabditis elegans, GI71996771, Length=275, Percent_Identity=26.9090909090909, Blast_Score=108, Evalue=5e-24, Organism=Drosophila melanogaster, GI21356207, Length=441, Percent_Identity=27.437641723356, Blast_Score=175, Evalue=5e-44, Organism=Drosophila melanogaster, GI19922432, Length=369, Percent_Identity=29.5392953929539, Blast_Score=151, Evalue=1e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR020612 - InterPro: IPR013848 - InterPro: IPR006467 - InterPro: IPR007197 - InterPro: IPR002792 [H]
Pfam domain/function: PF04055 Radical_SAM; PF01938 TRAM; PF00919 UPF0004 [H]
EC number: NA
Molecular weight: Translated: 50772; Mature: 50641
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: PS50926 TRAM ; PS01278 UPF0004
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVAFYTLGCKVNQYETEVMAELFRKAGYEIVDFDEIADVYVINTCSVTARSDMKSRQM CCEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEHHHHCCEEEEEECCCHHHHHHHHHHH IRKTRNKNPDAIVVAVGCYVQVSPDEVFSMPEVDIVIGTKDKDKIVDLVKDFENEKKKTK HHHHCCCCCCEEEEEEEEEEEECHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH LIENIMKQRDYEEFGITGYTERTRAYIKIEDGCNQYCTYCIIPYARGPVRSRKPENIIKE HHHHHHHHCCCHHHCCCCCCCCCEEEEEECCCCCCEEHEEEEECCCCCCCCCCHHHHHHH VKKYAEHGYKEIVLTGIHIASYGRDLKNIGLLDVIKMVHEVEGIERIRISSIEPTFLTED HHHHHHCCCCEEHHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCHHHEEECCCCCHHHHHH VVKELANLPKMCRHYHVSLQSGCDETLKRMGRKYTASEYKEVVERLRRYIPDVAITTDIM HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEHHEE VGFPGETEEEFEKSYKFAEEICFAKMHVFKYSRRKGTRAYNFPNQVPNKVKEERSKKLLQ EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH LSKVCERKFKERFLNRTVEVLFEQKVKDLDGYVEGLTDNYLSVAVKGELENLRNRILPVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHCCCHH VKEIKNDLLIGEIEGIY HHHHHCCCEEEECCCCC >Mature Secondary Structure AKVAFYTLGCKVNQYETEVMAELFRKAGYEIVDFDEIADVYVINTCSVTARSDMKSRQM CEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEHHHHCCEEEEEECCCHHHHHHHHHHH IRKTRNKNPDAIVVAVGCYVQVSPDEVFSMPEVDIVIGTKDKDKIVDLVKDFENEKKKTK HHHHCCCCCCEEEEEEEEEEEECHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH LIENIMKQRDYEEFGITGYTERTRAYIKIEDGCNQYCTYCIIPYARGPVRSRKPENIIKE HHHHHHHHCCCHHHCCCCCCCCCEEEEEECCCCCCEEHEEEEECCCCCCCCCCHHHHHHH VKKYAEHGYKEIVLTGIHIASYGRDLKNIGLLDVIKMVHEVEGIERIRISSIEPTFLTED HHHHHHCCCCEEHHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCHHHEEECCCCCHHHHHH VVKELANLPKMCRHYHVSLQSGCDETLKRMGRKYTASEYKEVVERLRRYIPDVAITTDIM HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEHHEE VGFPGETEEEFEKSYKFAEEICFAKMHVFKYSRRKGTRAYNFPNQVPNKVKEERSKKLLQ EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH LSKVCERKFKERFLNRTVEVLFEQKVKDLDGYVEGLTDNYLSVAVKGELENLRNRILPVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHCCCHH VKEIKNDLLIGEIEGIY HHHHHCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9023197; 9384377 [H]