| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
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The map label for this gene is Hit [C]
Identifier: 20807444
GI number: 20807444
Start: 968364
End: 968708
Strand: Direct
Name: Hit [C]
Synonym: TTE0963
Alternate gene names: 20807444
Gene position: 968364-968708 (Clockwise)
Preceding gene: 20807443
Following gene: 161760533
Centisome position: 36.01
GC content: 38.84
Gene sequence:
>345_bases GTGTCGGAATGCATTTTCTGCAAAATAGTAAACAAAGAAGTTCCTTCTAATATAGTGTATGAGGATGATTTAGTTGTAGC TTTCCGCGATATAAATCCCCAAGCTCCTGTACATATTCTAATCGTGCCAAAAGAACATATACCAACCCTTTTAGATGTTA CTGAGGAGAACAAGCACCTGATATCTCGTGCTTACATGGTAGCAAAGGAAATAGCAAAAAAAGAGGGTATTGACGAAAAA GGCTATAGAATTGTGACAAATTGTGGTAAAGATGGCGGACAGACAGTCTATCACCTTCATTTTCACCTTTTAGGTGGAAG GTTTATGACTTGGCCTCCAGGGTAA
Upstream 100 bases:
>100_bases TTGCCTGTTAGAGTAAAGGAAATAAAAAATGATTTATTGATAGGAGAAATTGAAGGAATTTATTAAGATGTGTAGAATAT AAAAAGAGGAGGTGAAAAAG
Downstream 100 bases:
>100_bases AATTATTGACACTTCGTGGATTTAGGAGTATAATAAAGTGAGAATTTTCAAGCTCTTAGTCACAGCAACAATTGCAGCTT GCCTCGAGCAGTTTATTTGG
Product: diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase
Products: NA
Alternate protein names: ORF 1 [H]
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MSECIFCKIVNKEVPSNIVYEDDLVVAFRDINPQAPVHILIVPKEHIPTLLDVTEENKHLISRAYMVAKEIAKKEGIDEK GYRIVTNCGKDGGQTVYHLHFHLLGGRFMTWPPG
Sequences:
>Translated_114_residues MSECIFCKIVNKEVPSNIVYEDDLVVAFRDINPQAPVHILIVPKEHIPTLLDVTEENKHLISRAYMVAKEIAKKEGIDEK GYRIVTNCGKDGGQTVYHLHFHLLGGRFMTWPPG >Mature_113_residues SECIFCKIVNKEVPSNIVYEDDLVVAFRDINPQAPVHILIVPKEHIPTLLDVTEENKHLISRAYMVAKEIAKKEGIDEKG YRIVTNCGKDGGQTVYHLHFHLLGGRFMTWPPG
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HIT domain [H]
Homologues:
Organism=Homo sapiens, GI14211923, Length=113, Percent_Identity=49.5575221238938, Blast_Score=128, Evalue=8e-31, Organism=Homo sapiens, GI4885413, Length=113, Percent_Identity=48.6725663716814, Blast_Score=124, Evalue=1e-29, Organism=Escherichia coli, GI1787346, Length=105, Percent_Identity=58.0952380952381, Blast_Score=121, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17506713, Length=113, Percent_Identity=46.0176991150442, Blast_Score=126, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6320078, Length=117, Percent_Identity=38.4615384615385, Blast_Score=77, Evalue=7e-16, Organism=Drosophila melanogaster, GI28574010, Length=112, Percent_Identity=46.4285714285714, Blast_Score=115, Evalue=4e-27, Organism=Drosophila melanogaster, GI24581222, Length=112, Percent_Identity=46.4285714285714, Blast_Score=115, Evalue=5e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011146 - InterPro: IPR011151 - InterPro: IPR019808 - InterPro: IPR001310 [H]
Pfam domain/function: PF01230 HIT [H]
EC number: NA
Molecular weight: Translated: 12928; Mature: 12797
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSECIFCKIVNKEVPSNIVYEDDLVVAFRDINPQAPVHILIVPKEHIPTLLDVTEENKHL CCCEEEEEEECCCCCCCEEECCCEEEEEECCCCCCCEEEEEECHHHCCCEEECCCCHHHH ISRAYMVAKEIAKKEGIDEKGYRIVTNCGKDGGQTVYHLHFHLLGGRFMTWPPG HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEEEEEECCEEEECCCC >Mature Secondary Structure SECIFCKIVNKEVPSNIVYEDDLVVAFRDINPQAPVHILIVPKEHIPTLLDVTEENKHL CCEEEEEEECCCCCCCEEECCCEEEEEECCCCCCCEEEEEECHHHCCCEEECCCCHHHH ISRAYMVAKEIAKKEGIDEKGYRIVTNCGKDGGQTVYHLHFHLLGGRFMTWPPG HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEEEEEECCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2108129; 1472710 [H]