Click here to switch to the map view.

The map label for this gene is Ftn [H]

Identifier: 20807440

GI number: 20807440

Start: 963751

End: 964272

Strand: Direct

Name: Ftn [H]

Synonym: TTE0959

Alternate gene names: 20807440

Gene position: 963751-964272 (Clockwise)

Preceding gene: 20807439

Following gene: 20807443

Centisome position: 35.83

GC content: 35.06

Gene sequence:

>522_bases
ATGTTGAGTGAAAGAATGTTGGAAGAACTTAATAAACAGTTGAATTACGAAATTTACTCTGCCTACCTTTATGTGGCTAT
GGAGAATTATTTTCAAGAGAAAAATTTAGAGGGTTTTGCAAATTTCTTTAAAGTGCAAATGGAAGAAGAACTTTCCCATG
CGAGAATTTTTTACGAATACATATACCGCATGGGAGGGAAAGTCACGTTATATCCAATTGAAAAGCCAGAGGAGAATTTT
GAAAGCATTTTAGATGTTTTTAAGAAAGCTTTGGAGCATGAAAAAACTGTGACACAGAGAATCCATAAGCTCGTTGATTT
AGCGATTGAAGAAAGAGACCACGCAACTAATGCTTTTTTGCAGTGGTTTGTGAATGAGCAAGTAGAAGAAGAGGAGAGTT
TTCAGAAAATAATAAACAAGCTAGAATTGATAGGTGACAGCATGCAGCCTATATTCATGTTAGATTCAGAATTAGCTAAG
AGGACTTTTGTATTACCTGCTCCTTTGGCAAAAAGTGAGTAA

Upstream 100 bases:

>100_bases
GGATAAGGGTAGTAAATTTTGATTTTTTGTGGTAAAATAAAAGGAGAAATATGAGATTTGAGGAAAGTAGTGACTAGAAT
AAAAGAAAGGAGTTAAAACT

Downstream 100 bases:

>100_bases
TAAATAGAATAATATAGGGTATGCTATAATAAATGGCATACCCTATTTCCTTAAAAAATTTTACTGAAAAAGTTTGAGTA
ATTTTTCGGCATTTTTAGGA

Product: Ferritin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MLSERMLEELNKQLNYEIYSAYLYVAMENYFQEKNLEGFANFFKVQMEEELSHARIFYEYIYRMGGKVTLYPIEKPEENF
ESILDVFKKALEHEKTVTQRIHKLVDLAIEERDHATNAFLQWFVNEQVEEEESFQKIINKLELIGDSMQPIFMLDSELAK
RTFVLPAPLAKSE

Sequences:

>Translated_173_residues
MLSERMLEELNKQLNYEIYSAYLYVAMENYFQEKNLEGFANFFKVQMEEELSHARIFYEYIYRMGGKVTLYPIEKPEENF
ESILDVFKKALEHEKTVTQRIHKLVDLAIEERDHATNAFLQWFVNEQVEEEESFQKIINKLELIGDSMQPIFMLDSELAK
RTFVLPAPLAKSE
>Mature_173_residues
MLSERMLEELNKQLNYEIYSAYLYVAMENYFQEKNLEGFANFFKVQMEEELSHARIFYEYIYRMGGKVTLYPIEKPEENF
ESILDVFKKALEHEKTVTQRIHKLVDLAIEERDHATNAFLQWFVNEQVEEEESFQKIINKLELIGDSMQPIFMLDSELAK
RTFVLPAPLAKSE

Specific function: May alleviate iron toxicity in the presence of oxygen [H]

COG id: COG1528

COG function: function code P; Ferritin-like protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ferritin-like diiron domain [H]

Homologues:

Organism=Homo sapiens, GI56682959, Length=140, Percent_Identity=32.1428571428571, Blast_Score=70, Evalue=7e-13,
Organism=Homo sapiens, GI29126241, Length=140, Percent_Identity=32.8571428571429, Blast_Score=70, Evalue=1e-12,
Organism=Escherichia coli, GI1788216, Length=159, Percent_Identity=35.8490566037736, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1788212, Length=141, Percent_Identity=26.9503546099291, Blast_Score=67, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17558956, Length=152, Percent_Identity=30.9210526315789, Blast_Score=70, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17506345, Length=140, Percent_Identity=33.5714285714286, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331
- InterPro:   IPR001519 [H]

Pfam domain/function: PF00210 Ferritin [H]

EC number: =1.16.3.1 [H]

Molecular weight: Translated: 20608; Mature: 20608

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSERMLEELNKQLNYEIYSAYLYVAMENYFQEKNLEGFANFFKVQMEEELSHARIFYEY
CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
IYRMGGKVTLYPIEKPEENFESILDVFKKALEHEKTVTQRIHKLVDLAIEERDHATNAFL
HHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
QWFVNEQVEEEESFQKIINKLELIGDSMQPIFMLDSELAKRTFVLPAPLAKSE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEECCCCCCCCCC
>Mature Secondary Structure
MLSERMLEELNKQLNYEIYSAYLYVAMENYFQEKNLEGFANFFKVQMEEELSHARIFYEY
CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
IYRMGGKVTLYPIEKPEENFESILDVFKKALEHEKTVTQRIHKLVDLAIEERDHATNAFL
HHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
QWFVNEQVEEEESFQKIINKLELIGDSMQPIFMLDSELAKRTFVLPAPLAKSE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA