| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
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The map label for this gene is 203284031
Identifier: 203284031
GI number: 203284031
Start: 114786
End: 116441
Strand: Reverse
Name: 203284031
Synonym: BDU_109
Alternate gene names: NA
Gene position: 116441-114786 (Counterclockwise)
Preceding gene: 203284032
Following gene: 203284030
Centisome position: 12.5
GC content: 25.48
Gene sequence:
>1656_bases TTGAAAACAAATAGGTTATTGTTATTTTTTATTTTGTTTTTAATCTTTTTTGTATCAATTTTTGTTTATTTGAGCTTAAA TCCATATGTTTTGTATATATTAAAGGGAGAAAGGGATTTTAATGAGGTTATTATAGAAATTGATGATTATATTTCAAGTG GGAATTTAGATAGTGCGGAGAAAGCAATTAAATTTTATTCTTATTATGCAGATACTGAATATAAGTGGCTTTCTCTTGTT AAGAGAGCAAAGCTTTATTCTGATAAAATCAATCATTATGTGTTGATGAGAAATATTCTAGATTTGAGTGTTAAAAGTTT ACCAGGGAATTTAAAGCTTAGAGCACTTGAAGTATATTCAAAACTTAAAGTAGGAGCTGTTTTAGAAGCTTATGATGTTG CTAAGCAGTATTTATTGGGATATAAAGAATATAAATATTTATGTGATGAGGCTTTTATTAAAAGTTTGATTTTAAATTAT GATGTCAAAGACATAAAGAGTTTTTTAATTAAAATGGAGCAAGAAAGAGATGCTCTTGCTTTTGAGACTATAGGATTCAA TCTTCAAAATAATGCGTTTTTAATTAATGCAATGCTTTTGTATATAGATAAAAAAGATTTTGATGCTGCTAGGAGAATAC TCTTAAAAATAAAAGAAGATAAGGATTTTGCTAAAGAACTTGCTTATATTTCTTACGGTCTTGATAATTTAGATTTTACT ATTGCCAATCTTAAACTTCTTAGTGATAATAGTGAACCTAGTTTAATGTTTTTGTTAGCAGATGCTTATTTGAAGAAGGG AGATATTAATAATGCTAAGAGTGAATATTTGAAACTTTATACAGATTTTCCTGATTATAGTATGATGATATATCTTGGGT TGGCATTTATTGCAAAGAAAGAAAATGATTTAAAGCGTGCCATTACTTATCTGAATAAGGCCAATGAAAAATTTAAAGGA AATGAAATGATGAATTATTATTTGGCTAGTATGTATTTTGAAATCAATGATTATTTTAATGCAAATGAGATTGTAAAAAG ATATAAAGATAATCCTTTATTTTTTAAACTTTATTTTATTTTAAATTATTCAAATTTAAAATATGAAGCTAAAAAGTCTT TTTTATGGCGTTTATTTTATAGATCAAACTATAGTAGTGATATTGCACAATTTTTGGCTTGGAATTTACTTCTTTATTCT GATTTAAAGGATTTAGATTTGTTCTTTAATGTTTATAATCCTGTTGATGAAATACAGGATTGGTATTATTTTTATAAATT TTATTATTTATTTCTAAAAAAGGACTTGGCTGTTGCAGAAAAAATACTTTTGCGTGAGCAAACGAACAAGTATTTATATG GTATATATTATAATTTTGGGGTTCTAAAGTTTTATCAAAAAAACTATAAGGAATCAGAAGAATATTTTAGTAATGCAGTT TCGACTTTACCTTTTGCTATTGATGATAAGAGTAGCATTAATTTAAAAGAGCGTGAGGATATAGCAAAAATATATTTAAA GCGAGGGATTAATTATCTTTATTTAGGTGAATTTGAAAAGGGACTAGAGGCCATTTCAATTGCTAATTCTTTTTATGAAA CTAATGAGGGTAAACTTTATATGAATATGATAAAGATATTTAAAGAGAGGAATTGA
Upstream 100 bases:
>100_bases GATGAGGCTATTTTGATTGCTAAAAAATATGGCAATAAAAATTCTGATAAGTTTGTCAATGGTATACTTGATGCTTTGTT AAAAGATATGGAGAGTTCTT
Downstream 100 bases:
>100_bases ATATTTGAAATTAAGATTAAAATCTAGAGAAGAAATTGAAAAGATTAAGGCATCAGGTAGACTTTTAGCTCAAACTTTTT TGGAAATCGAGAAAAATATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 551; Mature: 551
Protein sequence:
>551_residues MKTNRLLLFFILFLIFFVSIFVYLSLNPYVLYILKGERDFNEVIIEIDDYISSGNLDSAEKAIKFYSYYADTEYKWLSLV KRAKLYSDKINHYVLMRNILDLSVKSLPGNLKLRALEVYSKLKVGAVLEAYDVAKQYLLGYKEYKYLCDEAFIKSLILNY DVKDIKSFLIKMEQERDALAFETIGFNLQNNAFLINAMLLYIDKKDFDAARRILLKIKEDKDFAKELAYISYGLDNLDFT IANLKLLSDNSEPSLMFLLADAYLKKGDINNAKSEYLKLYTDFPDYSMMIYLGLAFIAKKENDLKRAITYLNKANEKFKG NEMMNYYLASMYFEINDYFNANEIVKRYKDNPLFFKLYFILNYSNLKYEAKKSFLWRLFYRSNYSSDIAQFLAWNLLLYS DLKDLDLFFNVYNPVDEIQDWYYFYKFYYLFLKKDLAVAEKILLREQTNKYLYGIYYNFGVLKFYQKNYKESEEYFSNAV STLPFAIDDKSSINLKEREDIAKIYLKRGINYLYLGEFEKGLEAISIANSFYETNEGKLYMNMIKIFKERN
Sequences:
>Translated_551_residues MKTNRLLLFFILFLIFFVSIFVYLSLNPYVLYILKGERDFNEVIIEIDDYISSGNLDSAEKAIKFYSYYADTEYKWLSLV KRAKLYSDKINHYVLMRNILDLSVKSLPGNLKLRALEVYSKLKVGAVLEAYDVAKQYLLGYKEYKYLCDEAFIKSLILNY DVKDIKSFLIKMEQERDALAFETIGFNLQNNAFLINAMLLYIDKKDFDAARRILLKIKEDKDFAKELAYISYGLDNLDFT IANLKLLSDNSEPSLMFLLADAYLKKGDINNAKSEYLKLYTDFPDYSMMIYLGLAFIAKKENDLKRAITYLNKANEKFKG NEMMNYYLASMYFEINDYFNANEIVKRYKDNPLFFKLYFILNYSNLKYEAKKSFLWRLFYRSNYSSDIAQFLAWNLLLYS DLKDLDLFFNVYNPVDEIQDWYYFYKFYYLFLKKDLAVAEKILLREQTNKYLYGIYYNFGVLKFYQKNYKESEEYFSNAV STLPFAIDDKSSINLKEREDIAKIYLKRGINYLYLGEFEKGLEAISIANSFYETNEGKLYMNMIKIFKERN >Mature_551_residues MKTNRLLLFFILFLIFFVSIFVYLSLNPYVLYILKGERDFNEVIIEIDDYISSGNLDSAEKAIKFYSYYADTEYKWLSLV KRAKLYSDKINHYVLMRNILDLSVKSLPGNLKLRALEVYSKLKVGAVLEAYDVAKQYLLGYKEYKYLCDEAFIKSLILNY DVKDIKSFLIKMEQERDALAFETIGFNLQNNAFLINAMLLYIDKKDFDAARRILLKIKEDKDFAKELAYISYGLDNLDFT IANLKLLSDNSEPSLMFLLADAYLKKGDINNAKSEYLKLYTDFPDYSMMIYLGLAFIAKKENDLKRAITYLNKANEKFKG NEMMNYYLASMYFEINDYFNANEIVKRYKDNPLFFKLYFILNYSNLKYEAKKSFLWRLFYRSNYSSDIAQFLAWNLLLYS DLKDLDLFFNVYNPVDEIQDWYYFYKFYYLFLKKDLAVAEKILLREQTNKYLYGIYYNFGVLKFYQKNYKESEEYFSNAV STLPFAIDDKSSINLKEREDIAKIYLKRGINYLYLGEFEKGLEAISIANSFYETNEGKLYMNMIKIFKERN
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65580; Mature: 65580
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTNRLLLFFILFLIFFVSIFVYLSLNPYVLYILKGERDFNEVIIEIDDYISSGNLDSAE CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEHHHCCCCCCCHHH KAIKFYSYYADTEYKWLSLVKRAKLYSDKINHYVLMRNILDLSVKSLPGNLKLRALEVYS HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHH KLKVGAVLEAYDVAKQYLLGYKEYKYLCDEAFIKSLILNYDVKDIKSFLIKMEQERDALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEE FETIGFNLQNNAFLINAMLLYIDKKDFDAARRILLKIKEDKDFAKELAYISYGLDNLDFT EEEECCEECCCEEEEEEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEE IANLKLLSDNSEPSLMFLLADAYLKKGDINNAKSEYLKLYTDFPDYSMMIYLGLAFIAKK EEEEEEECCCCCCCEEEEEEHHHHHCCCCCCCHHHHEEEEECCCCHHHHHHHHHHHHHCC ENDLKRAITYLNKANEKFKGNEMMNYYLASMYFEINDYFNANEIVKRYKDNPLFFKLYFI CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEECCCCCHHHHHHHHCCCCEEEEEEEE LNYSNLKYEAKKSFLWRLFYRSNYSSDIAQFLAWNLLLYSDLKDLDLFFNVYNPVDEIQD EECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHH WYYFYKFYYLFLKKDLAVAEKILLREQTNKYLYGIYYNFGVLKFYQKNYKESEEYFSNAV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHCCCHHHHHHHHHH STLPFAIDDKSSINLKEREDIAKIYLKRGINYLYLGEFEKGLEAISIANSFYETNEGKLY HHCCEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHCCCCCEEH MNMIKIFKERN HHHHHHHHCCC >Mature Secondary Structure MKTNRLLLFFILFLIFFVSIFVYLSLNPYVLYILKGERDFNEVIIEIDDYISSGNLDSAE CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEHHHCCCCCCCHHH KAIKFYSYYADTEYKWLSLVKRAKLYSDKINHYVLMRNILDLSVKSLPGNLKLRALEVYS HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHH KLKVGAVLEAYDVAKQYLLGYKEYKYLCDEAFIKSLILNYDVKDIKSFLIKMEQERDALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEE FETIGFNLQNNAFLINAMLLYIDKKDFDAARRILLKIKEDKDFAKELAYISYGLDNLDFT EEEECCEECCCEEEEEEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEE IANLKLLSDNSEPSLMFLLADAYLKKGDINNAKSEYLKLYTDFPDYSMMIYLGLAFIAKK EEEEEEECCCCCCCEEEEEEHHHHHCCCCCCCHHHHEEEEECCCCHHHHHHHHHHHHHCC ENDLKRAITYLNKANEKFKGNEMMNYYLASMYFEINDYFNANEIVKRYKDNPLFFKLYFI CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEECCCCCHHHHHHHHCCCCEEEEEEEE LNYSNLKYEAKKSFLWRLFYRSNYSSDIAQFLAWNLLLYSDLKDLDLFFNVYNPVDEIQD EECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHH WYYFYKFYYLFLKKDLAVAEKILLREQTNKYLYGIYYNFGVLKFYQKNYKESEEYFSNAV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHCCCHHHHHHHHHH STLPFAIDDKSSINLKEREDIAKIYLKRGINYLYLGEFEKGLEAISIANSFYETNEGKLY HHCCEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHCCCCCEEH MNMIKIFKERN HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA