| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
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The map label for this gene is 203283967
Identifier: 203283967
GI number: 203283967
Start: 47686
End: 49146
Strand: Reverse
Name: 203283967
Synonym: BDU_43
Alternate gene names: NA
Gene position: 49146-47686 (Counterclockwise)
Preceding gene: 203283968
Following gene: 203283966
Centisome position: 5.28
GC content: 24.78
Gene sequence:
>1461_bases ATGTTTTTTAAACAATATTTTATATTTCTTTTTTTCGTTTTATTTTCTTGTGTTAAAGGAAATAAGGATTTTATTATTTT TAATAAAGATTTTAATAAAAAGATGAGTAATAGCAAATTAAATTATTCTGATGCAAATGTGAGTGAAGATTCTGGAGAGA ATGTGTTTGGGTCTTTAATTGATCTGAAGGGTTATAAAATTTTGTCAGTTCATCAGGAAAATTTGAATTTAGATGTTTAT TTTGAGCAAGTGGTTTTAGCTCAAAATTTTGCAGATTTGAAGACACATTTATTTATTATTGGTTTTGATCCTAAAAGTCA TGAGGCAGTTGTTCTATTTAAGACACAAGTAAATATTGATTCTAAAAATTCTTATAATATGTATCTTGAAGATATTACTG GTGATTATGATTTTGATATAGTTGTTCAGGGTTTTTTAGATGAATATGCTGTTTTATATGTTTTTAAAAGGGCAGTTGCT AATGATGTTTCGTCATATAGACCTATATTTTTTGATAAGGTTAATGGAAACATTATTATAAATAAGTATTCTAGGTCTTC TGCTTATGATGATAAGAAATCGAGGGAAAGTTATTCAATTTCTTTAGAGAGATATGAAAAGCAGGGGGAGGATATGATAG TAAGTAAGATAGAAAAGTATGTATATTCTCAAGCGCAGGGTAAATATTATCCTTTGTCTACTAGTGAAAAGGTTAGACGT ATAGATAATGATGTATATCAAACTTTAAAAAATTTACCTAAAGATGAAGTTTATAAATTTTTATATGGTGTTTGGTATGA TAATGATTCTCATCAACGTTCAGGAAAGTTAGATCTTAAAAATATTTTGCTCTTATCATTTAATAGGCATTTTAATGAAA TTAGTATTTTTAAGAATAATTCTCAAGAAATTGCACACATTGAATATATTTCAAGACCTGCCTATAATATTCTCAATATC AGTACTAAATCTGTTTTTTCCGATTTAATAGTATATAACTTTTGGATTAAAATTGTTGATATTGACAATATTGAAATAAA AATTGATACAGGAACAGATGCTTATGATAAGTATGGGTTCTCAGGTATTTTTAAACGATTTAATAATTCTGTTTTAGAGA ATGATGATCAAAAATTTTTGTTTATTCCAAATGGTAATTATGTTTATAAAGATGTTATTTATGATTTTTCTTATCCTAGT CTTACTTATATTGTTAAAGATAATATTTATTATGGAATTTTTAATGTTTTTAATTTAAATAATAATTTAGTTCTTGAATA TGAAATTAGCATGGATGAGAATAAGGTAAGTGAGTCTTTTATTGTTGAGTATAGTGAGAGAATAGTTAATAATCAAAAAT TTTCTACTATTATTCTTCATCCTATTAAGATTTTAAAAGATGAAGTAAGTTTGCTAAAAAGGCAAAAATTAAAACTTGAG AGAATAGAGAAATTAGGGTAA
Upstream 100 bases:
>100_bases TTTCTTTAAAGGATTTTAGTTTAAATGCCGGTAATTAGAGTGTAGTTTAAGCTTTTATATTTTATTGAGTATAAGAGTAG ATATGTAAAAATCATGTGAT
Downstream 100 bases:
>100_bases AAACCATATGAAAATATTAAGGAGTATTATTACTTATATTAGTTTTTTTTTCTTTGTATTGTTTTTTACTGTTTTATTTT TTGTATTTTTAGTTTTTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MFFKQYFIFLFFVLFSCVKGNKDFIIFNKDFNKKMSNSKLNYSDANVSEDSGENVFGSLIDLKGYKILSVHQENLNLDVY FEQVVLAQNFADLKTHLFIIGFDPKSHEAVVLFKTQVNIDSKNSYNMYLEDITGDYDFDIVVQGFLDEYAVLYVFKRAVA NDVSSYRPIFFDKVNGNIIINKYSRSSAYDDKKSRESYSISLERYEKQGEDMIVSKIEKYVYSQAQGKYYPLSTSEKVRR IDNDVYQTLKNLPKDEVYKFLYGVWYDNDSHQRSGKLDLKNILLLSFNRHFNEISIFKNNSQEIAHIEYISRPAYNILNI STKSVFSDLIVYNFWIKIVDIDNIEIKIDTGTDAYDKYGFSGIFKRFNNSVLENDDQKFLFIPNGNYVYKDVIYDFSYPS LTYIVKDNIYYGIFNVFNLNNNLVLEYEISMDENKVSESFIVEYSERIVNNQKFSTIILHPIKILKDEVSLLKRQKLKLE RIEKLG
Sequences:
>Translated_486_residues MFFKQYFIFLFFVLFSCVKGNKDFIIFNKDFNKKMSNSKLNYSDANVSEDSGENVFGSLIDLKGYKILSVHQENLNLDVY FEQVVLAQNFADLKTHLFIIGFDPKSHEAVVLFKTQVNIDSKNSYNMYLEDITGDYDFDIVVQGFLDEYAVLYVFKRAVA NDVSSYRPIFFDKVNGNIIINKYSRSSAYDDKKSRESYSISLERYEKQGEDMIVSKIEKYVYSQAQGKYYPLSTSEKVRR IDNDVYQTLKNLPKDEVYKFLYGVWYDNDSHQRSGKLDLKNILLLSFNRHFNEISIFKNNSQEIAHIEYISRPAYNILNI STKSVFSDLIVYNFWIKIVDIDNIEIKIDTGTDAYDKYGFSGIFKRFNNSVLENDDQKFLFIPNGNYVYKDVIYDFSYPS LTYIVKDNIYYGIFNVFNLNNNLVLEYEISMDENKVSESFIVEYSERIVNNQKFSTIILHPIKILKDEVSLLKRQKLKLE RIEKLG >Mature_486_residues MFFKQYFIFLFFVLFSCVKGNKDFIIFNKDFNKKMSNSKLNYSDANVSEDSGENVFGSLIDLKGYKILSVHQENLNLDVY FEQVVLAQNFADLKTHLFIIGFDPKSHEAVVLFKTQVNIDSKNSYNMYLEDITGDYDFDIVVQGFLDEYAVLYVFKRAVA NDVSSYRPIFFDKVNGNIIINKYSRSSAYDDKKSRESYSISLERYEKQGEDMIVSKIEKYVYSQAQGKYYPLSTSEKVRR IDNDVYQTLKNLPKDEVYKFLYGVWYDNDSHQRSGKLDLKNILLLSFNRHFNEISIFKNNSQEIAHIEYISRPAYNILNI STKSVFSDLIVYNFWIKIVDIDNIEIKIDTGTDAYDKYGFSGIFKRFNNSVLENDDQKFLFIPNGNYVYKDVIYDFSYPS LTYIVKDNIYYGIFNVFNLNNNLVLEYEISMDENKVSESFIVEYSERIVNNQKFSTIILHPIKILKDEVSLLKRQKLKLE RIEKLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57126; Mature: 57126
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFKQYFIFLFFVLFSCVKGNKDFIIFNKDFNKKMSNSKLNYSDANVSEDSGENVFGSLI CCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHE DLKGYKILSVHQENLNLDVYFEQVVLAQNFADLKTHLFIIGFDPKSHEAVVLFKTQVNID ECCCEEEEEEECCCCCEEEEEHHHHHHHCHHCCEEEEEEEEECCCCCCEEEEEEEEECCC SKNSYNMYLEDITGDYDFDIVVQGFLDEYAVLYVFKRAVANDVSSYRPIFFDKVNGNIII CCCCCEEEEEECCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEE NKYSRSSAYDDKKSRESYSISLERYEKQGEDMIVSKIEKYVYSQAQGKYYPLSTSEKVRR EECCCCCCCCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHCCCCEECCCCHHHHHH IDNDVYQTLKNLPKDEVYKFLYGVWYDNDSHQRSGKLDLKNILLLSFNRHFNEISIFKNN HHHHHHHHHHCCCHHHHHHHHHHEEECCCCCCCCCCCCHHHEEEEEECCCCCEEEEEECC SQEIAHIEYISRPAYNILNISTKSVFSDLIVYNFWIKIVDIDNIEIKIDTGTDAYDKYGF CCCEEEEEHHCCCCCEEEECCHHHHHHHHHHEEEEEEEEEECCEEEEEECCCCHHHHCCH SGIFKRFNNSVLENDDQKFLFIPNGNYVYKDVIYDFSYPSLTYIVKDNIYYGIFNVFNLN HHHHHHHCCHHHCCCCCEEEEEECCCEEEEEEEEECCCCCEEEEEECCEEEEEEEEEECC NNLVLEYEISMDENKVSESFIVEYSERIVNNQKFSTIILHPIKILKDEVSLLKRQKLKLE CCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH RIEKLG HHHHCC >Mature Secondary Structure MFFKQYFIFLFFVLFSCVKGNKDFIIFNKDFNKKMSNSKLNYSDANVSEDSGENVFGSLI CCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHE DLKGYKILSVHQENLNLDVYFEQVVLAQNFADLKTHLFIIGFDPKSHEAVVLFKTQVNID ECCCEEEEEEECCCCCEEEEEHHHHHHHCHHCCEEEEEEEEECCCCCCEEEEEEEEECCC SKNSYNMYLEDITGDYDFDIVVQGFLDEYAVLYVFKRAVANDVSSYRPIFFDKVNGNIII CCCCCEEEEEECCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEE NKYSRSSAYDDKKSRESYSISLERYEKQGEDMIVSKIEKYVYSQAQGKYYPLSTSEKVRR EECCCCCCCCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHCCCCEECCCCHHHHHH IDNDVYQTLKNLPKDEVYKFLYGVWYDNDSHQRSGKLDLKNILLLSFNRHFNEISIFKNN HHHHHHHHHHCCCHHHHHHHHHHEEECCCCCCCCCCCCHHHEEEEEECCCCCEEEEEECC SQEIAHIEYISRPAYNILNISTKSVFSDLIVYNFWIKIVDIDNIEIKIDTGTDAYDKYGF CCCEEEEEHHCCCCCEEEECCHHHHHHHHHHEEEEEEEEEECCEEEEEECCCCHHHHCCH SGIFKRFNNSVLENDDQKFLFIPNGNYVYKDVIYDFSYPSLTYIVKDNIYYGIFNVFNLN HHHHHHHCCHHHCCCCCEEEEEECCCEEEEEEEEECCCCCEEEEEECCEEEEEEEEEECC NNLVLEYEISMDENKVSESFIVEYSERIVNNQKFSTIILHPIKILKDEVSLLKRQKLKLE CCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH RIEKLG HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]