Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094566

Identifier: 20094566

GI number: 20094566

Start: 1105400

End: 1105687

Strand: Direct

Name: 20094566

Synonym: MK1130

Alternate gene names: NA

Gene position: 1105400-1105687 (Clockwise)

Preceding gene: 20094565

Following gene: 20094568

Centisome position: 65.22

GC content: 63.54

Gene sequence:

>288_bases
ATGACGGCCCGTCGTTTCCGCCCGGGCACACCCGTTCTCCTCCCCGTGATCCGGTTCTTCGGGCGCGTGATCGTCACTCC
GTTCTGTTTCACGGTAGGGAGGGAACCCGTCCCGTGTCGTGTAGTGGTGTCCTACGGTCGCGGGGCCGGTCCGGTGGATT
TCCGTGAGCTTAAGGTTGAGTCCGTTAACTTCCCGATGTGTCCGGTGTCACTCCCGTTGGCGGTGGGCTTCGGTGTGCGA
GTTCTCGGGGAGCGATCGGTGTACCGCCGATCGGGGCGCCATTCCTAA

Upstream 100 bases:

>100_bases
CGTGGTACCGGGGTGAAGTAAAAGCACCAGAACCGTGAGCTTCCGGTCCGGGGCCCGGGTCGTCCCGGCGGGTCGGGAGA
GCGGGGCGGACCCCCGCCCG

Downstream 100 bases:

>100_bases
GTCTCAGTAAGGTTCCCTACGGGCTCCGGCACCGTCGGTGGCTCCAGTGGGGTTATGTGGGTTCGAAAGTCATCCCATTA
GCCGCTGTTTTGAATTTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MTARRFRPGTPVLLPVIRFFGRVIVTPFCFTVGREPVPCRVVVSYGRGAGPVDFRELKVESVNFPMCPVSLPLAVGFGVR
VLGERSVYRRSGRHS

Sequences:

>Translated_95_residues
MTARRFRPGTPVLLPVIRFFGRVIVTPFCFTVGREPVPCRVVVSYGRGAGPVDFRELKVESVNFPMCPVSLPLAVGFGVR
VLGERSVYRRSGRHS
>Mature_94_residues
TARRFRPGTPVLLPVIRFFGRVIVTPFCFTVGREPVPCRVVVSYGRGAGPVDFRELKVESVNFPMCPVSLPLAVGFGVRV
LGERSVYRRSGRHS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10564; Mature: 10432

Theoretical pI: Translated: 11.95; Mature: 11.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARRFRPGTPVLLPVIRFFGRVIVTPFCFTVGREPVPCRVVVSYGRGAGPVDFRELKVE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHEEEE
SVNFPMCPVSLPLAVGFGVRVLGERSVYRRSGRHS
CCCCCCCCCCCCHHHCCCEEEECCHHHHHCCCCCC
>Mature Secondary Structure 
TARRFRPGTPVLLPVIRFFGRVIVTPFCFTVGREPVPCRVVVSYGRGAGPVDFRELKVE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHEEEE
SVNFPMCPVSLPLAVGFGVRVLGERSVYRRSGRHS
CCCCCCCCCCCCHHHCCCEEEECCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA