Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20093936

Identifier: 20093936

GI number: 20093936

Start: 459523

End: 460449

Strand: Reverse

Name: 20093936

Synonym: MK0498

Alternate gene names: NA

Gene position: 460449-459523 (Counterclockwise)

Preceding gene: 20093937

Following gene: 20093935

Centisome position: 27.17

GC content: 59.65

Gene sequence:

>927_bases
GTGGAAAGGATTCGAGCACGGTTGAACCTAGGGGAAACGTTGTTGGAATGGGAGCGTGTGTTGGCCCGGTGTGACGGTTG
CGGGGCTTGCGAATCCAGATGTCCGAACGACGTACCCAGAAGATTGTTCAACGTGCTCGCTGCCTCGGGTCGATTCGAGG
AGGCGTTGAGCGTAGCTTCCGACTGCACGGTGTGTGGTCTTTGTGAGCGGCTGTGCCCACACAACATCCCCTACACGGAG
GTGATCACCGATCTGAGGAGGGAGGAACCCACCCCAGAGGCCGTGCGAAGAGTCCGGCGGACGGGTACCCCGTACGGACG
GAAGCTCGCCGATGAATCCGAGCCTCTACAGGGCGACGGAGTAGCGATCTTAGGATGCACTATCAGAAGTCGGCCGGAGT
GGCTCCGACGGGTCATCGAAATCGTGCGCCGCGCGGGGTTGGCGACCTTAGGCGAGGATGAACCTTGCTGTATGAACTTC
GCTCGGAAGCGTGGCGAGGAAGTCCCCGAGGAGACTGTGCAAAGGTGGTGCTCGCTGTTCGATGATTTCGACACCGTAGT
GGTGTTTTGCCCGGGTTGTTACGATTTCTGTGTGGAAGTGCTCGACGAGCGTCCGCTGTACTACGCCGAGATAGCGGAGT
TCGACGGGATACCGGAAGGTGCCGCTTACAAATCACCGTGCCACCTCGTGAGGCATGGAGTGGATGACCATGTCCTGGAG
CGCCTTCCCGACGTTGAGTTACCACCACGTAGGCATCGATGTTGCGGCGGCGGGGCACTCGTGAGGAAGCCTTCGGAGTC
CACGGTGAGGGCGTACGAACGGCTCGGAAAACCCGTCCTCACACCCTGCCCTATGTGCGTCACCACACTCGAGGGAGTTA
TTGACGTAAGGCCGCTGTGGGATCACGTCGTCGATTTATCCCGATGA

Upstream 100 bases:

>100_bases
TCGACTCCGGTCTTATCCCGGAAGAACTCGCGGAGCTCGCACTGGAGACCGCTAAGAGGGTCGAAAAACGTGGGATGAAG
GAGGTCAAGCCCTACCCCGT

Downstream 100 bases:

>100_bases
CGAACCCGCTGTCTGCCGACCACTCCTAGGGTGACGAGGTTACGCACTCCCTGAGGGGTCTCGGCTTGACGTTGGACGAA
CGCGATCTGGAGCTCATCCG

Product: Fe-S oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MERIRARLNLGETLLEWERVLARCDGCGACESRCPNDVPRRLFNVLAASGRFEEALSVASDCTVCGLCERLCPHNIPYTE
VITDLRREEPTPEAVRRVRRTGTPYGRKLADESEPLQGDGVAILGCTIRSRPEWLRRVIEIVRRAGLATLGEDEPCCMNF
ARKRGEEVPEETVQRWCSLFDDFDTVVVFCPGCYDFCVEVLDERPLYYAEIAEFDGIPEGAAYKSPCHLVRHGVDDHVLE
RLPDVELPPRRHRCCGGGALVRKPSESTVRAYERLGKPVLTPCPMCVTTLEGVIDVRPLWDHVVDLSR

Sequences:

>Translated_308_residues
MERIRARLNLGETLLEWERVLARCDGCGACESRCPNDVPRRLFNVLAASGRFEEALSVASDCTVCGLCERLCPHNIPYTE
VITDLRREEPTPEAVRRVRRTGTPYGRKLADESEPLQGDGVAILGCTIRSRPEWLRRVIEIVRRAGLATLGEDEPCCMNF
ARKRGEEVPEETVQRWCSLFDDFDTVVVFCPGCYDFCVEVLDERPLYYAEIAEFDGIPEGAAYKSPCHLVRHGVDDHVLE
RLPDVELPPRRHRCCGGGALVRKPSESTVRAYERLGKPVLTPCPMCVTTLEGVIDVRPLWDHVVDLSR
>Mature_308_residues
MERIRARLNLGETLLEWERVLARCDGCGACESRCPNDVPRRLFNVLAASGRFEEALSVASDCTVCGLCERLCPHNIPYTE
VITDLRREEPTPEAVRRVRRTGTPYGRKLADESEPLQGDGVAILGCTIRSRPEWLRRVIEIVRRAGLATLGEDEPCCMNF
ARKRGEEVPEETVQRWCSLFDDFDTVVVFCPGCYDFCVEVLDERPLYYAEIAEFDGIPEGAAYKSPCHLVRHGVDDHVLE
RLPDVELPPRRHRCCGGGALVRKPSESTVRAYERLGKPVLTPCPMCVTTLEGVIDVRPLWDHVVDLSR

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34741; Mature: 34741

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
6.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERIRARLNLGETLLEWERVLARCDGCGACESRCPNDVPRRLFNVLAASGRFEEALSVAS
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHH
DCTVCGLCERLCPHNIPYTEVITDLRREEPTPEAVRRVRRTGTPYGRKLADESEPLQGDG
CCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCC
VAILGCTIRSRPEWLRRVIEIVRRAGLATLGEDEPCCMNFARKRGEEVPEETVQRWCSLF
EEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH
DDFDTVVVFCPGCYDFCVEVLDERPLYYAEIAEFDGIPEGAAYKSPCHLVRHGVDDHVLE
HCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHCCCCHHHHH
RLPDVELPPRRHRCCGGGALVRKPSESTVRAYERLGKPVLTPCPMCVTTLEGVIDVRPLW
HCCCCCCCCHHHHCCCCCCEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHH
DHVVDLSR
HHHHHCCC
>Mature Secondary Structure
MERIRARLNLGETLLEWERVLARCDGCGACESRCPNDVPRRLFNVLAASGRFEEALSVAS
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHH
DCTVCGLCERLCPHNIPYTEVITDLRREEPTPEAVRRVRRTGTPYGRKLADESEPLQGDG
CCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCC
VAILGCTIRSRPEWLRRVIEIVRRAGLATLGEDEPCCMNFARKRGEEVPEETVQRWCSLF
EEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH
DDFDTVVVFCPGCYDFCVEVLDERPLYYAEIAEFDGIPEGAAYKSPCHLVRHGVDDHVLE
HCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHCCCCHHHHH
RLPDVELPPRRHRCCGGGALVRKPSESTVRAYERLGKPVLTPCPMCVTTLEGVIDVRPLW
HCCCCCCCCHHHHCCCCCCEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHH
DHVVDLSR
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA