| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093668
Identifier: 20093668
GI number: 20093668
Start: 214814
End: 215236
Strand: Direct
Name: 20093668
Synonym: MK0228
Alternate gene names: NA
Gene position: 214814-215236 (Clockwise)
Preceding gene: 20093664
Following gene: 20093669
Centisome position: 12.67
GC content: 60.05
Gene sequence:
>423_bases GTGCCGTGGGAGGAGATCGAGCACACGGCGGATGCCGCGTTCCGAGTGTGGGCCGACACGCCTGAGGATCTCCTGGTTGA AGCCGCCAAGGCGCTGTTCGATCTGATCACGGACCTGGACGCGGTGGAACCCGAGGAGGAGGTGGAGATCGAGGCGGAAG GAGGAGACCTAGTGGAGTTACTACACGACTGGCTCGAGGAGATACACTTCCGACACGAGATCGATGGAATGCTGTTCTCC GACTTCGAAGTGAAGGAACTGAAGAAAGAGGAAGGATGGAAGGTACGTGGCGTAGCCCGAGGTGAGCCCTACGACCCGGA CCGACATCCGTTCCACACCGAGGTCAAGGCCGTGACCTACCACAACATGAAGGTCGAGCGCGAAGACGGACGGTGGGTAG CCGAGTACGTGGTCGACTTGTGA
Upstream 100 bases:
>100_bases ATCCTTCCGGGAATCGCCAAGCACACGTCGTCCACACCCCGCTGGGTTGAACCGAAGAACTTCTTTCGTATTTTCTCCCG AGGGCCAGGGGGAAGCTCCG
Downstream 100 bases:
>100_bases AGGGGGCAGGTCGATCTTTGAACCTGGACCGTTATCGGAACATCGTCCGTGAGACGGAGCGGAAGTACATCAATGTGAAC CCTATCCAACGAGGGGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MPWEEIEHTADAAFRVWADTPEDLLVEAAKALFDLITDLDAVEPEEEVEIEAEGGDLVELLHDWLEEIHFRHEIDGMLFS DFEVKELKKEEGWKVRGVARGEPYDPDRHPFHTEVKAVTYHNMKVEREDGRWVAEYVVDL
Sequences:
>Translated_140_residues MPWEEIEHTADAAFRVWADTPEDLLVEAAKALFDLITDLDAVEPEEEVEIEAEGGDLVELLHDWLEEIHFRHEIDGMLFS DFEVKELKKEEGWKVRGVARGEPYDPDRHPFHTEVKAVTYHNMKVEREDGRWVAEYVVDL >Mature_139_residues PWEEIEHTADAAFRVWADTPEDLLVEAAKALFDLITDLDAVEPEEEVEIEAEGGDLVELLHDWLEEIHFRHEIDGMLFSD FEVKELKKEEGWKVRGVARGEPYDPDRHPFHTEVKAVTYHNMKVEREDGRWVAEYVVDL
Specific function: Unknown
COG id: COG1371
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0211 (archease) family
Homologues:
Organism=Homo sapiens, GI30425510, Length=129, Percent_Identity=37.984496124031, Blast_Score=85, Evalue=2e-17, Organism=Drosophila melanogaster, GI24648776, Length=126, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y228_METKA (Q8TYR4)
Other databases:
- EMBL: AE009439 - RefSeq: NP_613515.1 - ProteinModelPortal: Q8TYR4 - SMR: Q8TYR4 - GeneID: 1477531 - GenomeReviews: AE009439_GR - KEGG: mka:MK0228 - NMPDR: fig|190192.1.peg.228 - HOGENOM: HBG729173 - OMA: ELLFLFD - BioCyc: MKAN190192:MK0228-MONOMER - HAMAP: MF_01222 - InterPro: IPR002804 - InterPro: IPR022952 - Gene3D: G3DSA:3.55.10.10 - PANTHER: PTHR12682
Pfam domain/function: PF01951 DUF101; SSF69819 DUF101
EC number: NA
Molecular weight: Translated: 16358; Mature: 16227
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWEEIEHTADAAFRVWADTPEDLLVEAAKALFDLITDLDAVEPEEEVEIEAEGGDLVEL CCHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHH LHDWLEEIHFRHEIDGMLFSDFEVKELKKEEGWKVRGVARGEPYDPDRHPFHTEVKAVTY HHHHHHHHHHHHHHCCCEECCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHEEEEE HNMKVEREDGRWVAEYVVDL ECEEEECCCCCCHHHHHHCC >Mature Secondary Structure PWEEIEHTADAAFRVWADTPEDLLVEAAKALFDLITDLDAVEPEEEVEIEAEGGDLVEL CHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHH LHDWLEEIHFRHEIDGMLFSDFEVKELKKEEGWKVRGVARGEPYDPDRHPFHTEVKAVTY HHHHHHHHHHHHHHCCCEECCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHEEEEE HNMKVEREDGRWVAEYVVDL ECEEEECCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11930014