Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20093482

Identifier: 20093482

GI number: 20093482

Start: 37451

End: 38404

Strand: Reverse

Name: 20093482

Synonym: MK0042

Alternate gene names: NA

Gene position: 38404-37451 (Counterclockwise)

Preceding gene: 20093483

Following gene: 20093479

Centisome position: 2.27

GC content: 61.53

Gene sequence:

>954_bases
ATGCGAGCCCTAGCACTTCTAGCGTTGGTCCTTGCGGCGGTGGGTGGCGCCGCGGCTGAAGAAGCACCGCTATACGGAGT
GCTGACGCACCCGTGGACATTCCAGCTCTCCGCGAACCAGGCCAAGCAGATACCGAAAGAGTACGTGATCTCCGTGGAAG
CACCGGCCGGCGCTCAACTACCGCTAGGTAAGGCGTACTACGGGGTGTTCGTAGCCGACGGGAATCACGCCGCGTTGATT
GTGGATCTAACTCCGGCGGTGACGGGAGAGACGGATGATGCTGTAGTGGTGGACCCCAACGCGATGTCAGGTAAGCTTCC
GCCGGCCGTGAAGTTCAGGCAGTGGAAGCCAGCTCATCTGGCCAAAGGGGCTCTCCTGGCCCTATCGCTGGAGACCAAGC
CGCTGCCGGTAGGTCTGTCGCTCAAGATGGTCGCTCCAGAAGAACTGACGATTGAGGTCGGGAAGTTCCAGGTGAAACTC
AACCGGGAGCTCCTAGAAGGCCTGGCGCGAGTACTGGCTACGCACGAGTACGGTCACCCCCACGGTAAGAAGAAGACTCC
CGTGGGGTACCTGCAGGCGCTCGTGTTCAAGTACTTCGTGAAGGCGTCGGTGACGGGAGCCGAGCCGGAAGAGCTCCAGA
AACTCGAGGTCAGTGAGGAGGAGAAGGAAGGGGAGGAAGAGAAGGAGGTCGACGAAGAGACCGGGTACGCGCTCCGTGCG
TTCCTAGAAGTGAACGAGCAGCAGGGTCTGACGGACCTGAAGGCGGAGTTCAGTGTTGACAACCTCGAGAACTTGATCGG
TGAAGCCGTGACGGTCCTGCAGGATGTCCTCAGCAGCCCCGAGGCGCAGCAGGCGGCAGCCACGGCGGAAAGTGCGCTCA
AGAAGTTCGTTCAGGTACCGGTGGCCGCGGTGTGCTTGCTCGGGATCGCGCTGGTGGCCGTCCGACGCCGATAG

Upstream 100 bases:

>100_bases
GAAGAACTAAGGCCGATACTGACACCAGCTCAGTCCACAGAGGCGAACGAAAAGGTTAATTATTCGATTTCAGTCTACTA
TAAGTGCGGGGGAATGTAAC

Downstream 100 bases:

>100_bases
GGGCTTTCTTTCCCCAGGTCGAAATTGTTACGGGCTCTATAACATACGTCTATGCGGTGTCCGGGAGTGGCGCGACCGTC
GCCCCGCCGGTATCGGAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MRALALLALVLAAVGGAAAEEAPLYGVLTHPWTFQLSANQAKQIPKEYVISVEAPAGAQLPLGKAYYGVFVADGNHAALI
VDLTPAVTGETDDAVVVDPNAMSGKLPPAVKFRQWKPAHLAKGALLALSLETKPLPVGLSLKMVAPEELTIEVGKFQVKL
NRELLEGLARVLATHEYGHPHGKKKTPVGYLQALVFKYFVKASVTGAEPEELQKLEVSEEEKEGEEEKEVDEETGYALRA
FLEVNEQQGLTDLKAEFSVDNLENLIGEAVTVLQDVLSSPEAQQAAATAESALKKFVQVPVAAVCLLGIALVAVRRR

Sequences:

>Translated_317_residues
MRALALLALVLAAVGGAAAEEAPLYGVLTHPWTFQLSANQAKQIPKEYVISVEAPAGAQLPLGKAYYGVFVADGNHAALI
VDLTPAVTGETDDAVVVDPNAMSGKLPPAVKFRQWKPAHLAKGALLALSLETKPLPVGLSLKMVAPEELTIEVGKFQVKL
NRELLEGLARVLATHEYGHPHGKKKTPVGYLQALVFKYFVKASVTGAEPEELQKLEVSEEEKEGEEEKEVDEETGYALRA
FLEVNEQQGLTDLKAEFSVDNLENLIGEAVTVLQDVLSSPEAQQAAATAESALKKFVQVPVAAVCLLGIALVAVRRR
>Mature_317_residues
MRALALLALVLAAVGGAAAEEAPLYGVLTHPWTFQLSANQAKQIPKEYVISVEAPAGAQLPLGKAYYGVFVADGNHAALI
VDLTPAVTGETDDAVVVDPNAMSGKLPPAVKFRQWKPAHLAKGALLALSLETKPLPVGLSLKMVAPEELTIEVGKFQVKL
NRELLEGLARVLATHEYGHPHGKKKTPVGYLQALVFKYFVKASVTGAEPEELQKLEVSEEEKEGEEEKEVDEETGYALRA
FLEVNEQQGLTDLKAEFSVDNLENLIGEAVTVLQDVLSSPEAQQAAATAESALKKFVQVPVAAVCLLGIALVAVRRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33959; Mature: 33959

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALALLALVLAAVGGAAAEEAPLYGVLTHPWTFQLSANQAKQIPKEYVISVEAPAGAQL
CHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEECCCHHHHCCHHHEEEEECCCCCCC
PLGKAYYGVFVADGNHAALIVDLTPAVTGETDDAVVVDPNAMSGKLPPAVKFRQWKPAHL
CCCCEEEEEEEECCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHH
AKGALLALSLETKPLPVGLSLKMVAPEELTIEVGKFQVKLNRELLEGLARVLATHEYGHP
HCCEEEEEEECCCCCCCCCEEEEECCCCEEEEEEEEEEEECHHHHHHHHHHHHHHCCCCC
HGKKKTPVGYLQALVFKYFVKASVTGAEPEELQKLEVSEEEKEGEEEKEVDEETGYALRA
CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHCCCHHHHHHHHCCHHHHH
FLEVNEQQGLTDLKAEFSVDNLENLIGEAVTVLQDVLSSPEAQQAAATAESALKKFVQVP
HHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
VAAVCLLGIALVAVRRR
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRALALLALVLAAVGGAAAEEAPLYGVLTHPWTFQLSANQAKQIPKEYVISVEAPAGAQL
CHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEECCCHHHHCCHHHEEEEECCCCCCC
PLGKAYYGVFVADGNHAALIVDLTPAVTGETDDAVVVDPNAMSGKLPPAVKFRQWKPAHL
CCCCEEEEEEEECCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHH
AKGALLALSLETKPLPVGLSLKMVAPEELTIEVGKFQVKLNRELLEGLARVLATHEYGHP
HCCEEEEEEECCCCCCCCCEEEEECCCCEEEEEEEEEEEECHHHHHHHHHHHHHHCCCCC
HGKKKTPVGYLQALVFKYFVKASVTGAEPEELQKLEVSEEEKEGEEEKEVDEETGYALRA
CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHCCCHHHHHHHHCCHHHHH
FLEVNEQQGLTDLKAEFSVDNLENLIGEAVTVLQDVLSSPEAQQAAATAESALKKFVQVP
HHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
VAAVCLLGIALVAVRRR
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA