| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093457
Identifier: 20093457
GI number: 20093457
Start: 16252
End: 17787
Strand: Direct
Name: 20093457
Synonym: MK0017
Alternate gene names: NA
Gene position: 16252-17787 (Clockwise)
Preceding gene: 20093456
Following gene: 20093458
Centisome position: 0.96
GC content: 63.74
Gene sequence:
>1536_bases TTGCTCGACCTCCTGCACGAAGCTTGTGAATCGCTCGACGCAGCGCTCGAGCTGAAGCGGCTGGCTTACGAGGGGAAGCT AAGCGTCGATGAGGTGGTTACGGACCTGGGAGAACTCACGGATCGGGAACTCGAAGCCCTAGGTGACAATCTGCGCACGT TTCCGATGGGCTGCGATCTGATCGAGCTGGCCGTAGGTCCCTGTGCCTCCGATTACTCCCCGGATGTCCTCCTTGCGAAC GCCATCCTGGCGGACCGGATGGGATTACCGCTCCACGTGTGCGCGTACGCGGTGGCGGACGTCGCCGAGAACTACGGGAT GAGGCCTATCGAGTTGTTCCGTCGCCTTGTGAGGAACGTTCGCGTGCCGGTGGACGTGGATCATATAGGAGCTCACGGCC CGATGCGGTTTCCGCGAGATATAACCGCGTGTGAGGGAACTTGCTACCTGGAAGGGCCGCCGTTCAAAGAGTGCCCTCGA GGTAGGATACATCGGCGGTTGATCGACAAGGAGAGGCAGCAGGGAGAGGATCTGGAGGAATGGGCGGAACTGGCGGCCTC GATCTGTGTGAACGTCACGGGAGAAGGGGGACAGGACGCGGAAGCCCACGCCGCTCCACTCGATGAGATGAAGCGCGTCG CCGAAACGGCTCGACACTCGGGTGCGGGCGTCGGAGCCATCCTGCACGTCGCGGACGGCGAGGACGAGTTCGCCGACGGC CTCAAAGCGGCCGTCGAGGAGGTGAAAGCGGACTACCTAGCGGTCGAAGGAGGTCCGTTCAACCGAGCCGAAGATCGACT CTCGGCCTTCCGACGGGCCGTAGTAGCGTGCAGGGTATTCGCGCCCGGAAAGGTCGTCCTGACCAACGGGGCTTACGAGG ACGAACTCGTCGTGGGACTGAGAGCAGGCTTGAACGGCGCCCTCTCAGGGTTCCCCAAAAATCACCACGGATACATGGTC GGGTACGAGCCCGGAACCGCGCGACGCGGTAAGTTCGGACTCCCAAAGGTTCTCGCGATCATGCGGAAGACGTTGGGCTC ACGGTACGGGAACACCAAGGTGCCGGCCGGCTGGGAGGAACTCGAAGGGATCACGCGGGCCGCTCTCTTCCTGGGATCCA ACTTACTGTACCCGCGAGACGTGGCCGGCATCCCGATAGGTGACGTCCACTGGGTAGCCGCCCTCCGGTCCAACGCCGCC CGCGAGTTGTCCGATGAGGTCAGGTCCGTCGAGGAGGTCGCATCGGAAGTTGACGCCGATACCGTCGCCCTGTTGGGTGG GAGGTTCCCGGCCTGGGGTCTCGCCTTGACCCTCGACGAGCTGGGCGTGTCCGAAGTGCTGATAAGCGATCCGGACGCGT GGGTCGAGAGGGCCACCGTACGGTTGCTGGACGAGGAGCTCGACGCCACGGTACACGCAATGGCTGGGGACGATCGCAAG GCCGTGAAGGAAGCAGACGCGGCCTTCGTGACGGCCGTCATGCCGGGGATAGCCGAGCGCCTAGCCGAGAGGACCGGGGC GATGACCGTGTGCTGA
Upstream 100 bases:
>100_bases AGGTTAAGGGTGTCGGAAACCCGCGGACCGGCAACCTGGATAGGGTCGTGGAGCTCATCGAGGGGTTCGGGCTCAAGCCC GAGCTCAGGGGTGACCGAGC
Downstream 100 bases:
>100_bases AGGAGACGCTGCTCAAGGCCTGGTGGGAGTCCTGGGAAGGCACCCGCCGGGGTGACGAGGAGCGGGAGGTCGAAGGGCTC CGCGAGTACTTGACCTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 511; Mature: 511
Protein sequence:
>511_residues MLDLLHEACESLDAALELKRLAYEGKLSVDEVVTDLGELTDRELEALGDNLRTFPMGCDLIELAVGPCASDYSPDVLLAN AILADRMGLPLHVCAYAVADVAENYGMRPIELFRRLVRNVRVPVDVDHIGAHGPMRFPRDITACEGTCYLEGPPFKECPR GRIHRRLIDKERQQGEDLEEWAELAASICVNVTGEGGQDAEAHAAPLDEMKRVAETARHSGAGVGAILHVADGEDEFADG LKAAVEEVKADYLAVEGGPFNRAEDRLSAFRRAVVACRVFAPGKVVLTNGAYEDELVVGLRAGLNGALSGFPKNHHGYMV GYEPGTARRGKFGLPKVLAIMRKTLGSRYGNTKVPAGWEELEGITRAALFLGSNLLYPRDVAGIPIGDVHWVAALRSNAA RELSDEVRSVEEVASEVDADTVALLGGRFPAWGLALTLDELGVSEVLISDPDAWVERATVRLLDEELDATVHAMAGDDRK AVKEADAAFVTAVMPGIAERLAERTGAMTVC
Sequences:
>Translated_511_residues MLDLLHEACESLDAALELKRLAYEGKLSVDEVVTDLGELTDRELEALGDNLRTFPMGCDLIELAVGPCASDYSPDVLLAN AILADRMGLPLHVCAYAVADVAENYGMRPIELFRRLVRNVRVPVDVDHIGAHGPMRFPRDITACEGTCYLEGPPFKECPR GRIHRRLIDKERQQGEDLEEWAELAASICVNVTGEGGQDAEAHAAPLDEMKRVAETARHSGAGVGAILHVADGEDEFADG LKAAVEEVKADYLAVEGGPFNRAEDRLSAFRRAVVACRVFAPGKVVLTNGAYEDELVVGLRAGLNGALSGFPKNHHGYMV GYEPGTARRGKFGLPKVLAIMRKTLGSRYGNTKVPAGWEELEGITRAALFLGSNLLYPRDVAGIPIGDVHWVAALRSNAA RELSDEVRSVEEVASEVDADTVALLGGRFPAWGLALTLDELGVSEVLISDPDAWVERATVRLLDEELDATVHAMAGDDRK AVKEADAAFVTAVMPGIAERLAERTGAMTVC >Mature_511_residues MLDLLHEACESLDAALELKRLAYEGKLSVDEVVTDLGELTDRELEALGDNLRTFPMGCDLIELAVGPCASDYSPDVLLAN AILADRMGLPLHVCAYAVADVAENYGMRPIELFRRLVRNVRVPVDVDHIGAHGPMRFPRDITACEGTCYLEGPPFKECPR GRIHRRLIDKERQQGEDLEEWAELAASICVNVTGEGGQDAEAHAAPLDEMKRVAETARHSGAGVGAILHVADGEDEFADG LKAAVEEVKADYLAVEGGPFNRAEDRLSAFRRAVVACRVFAPGKVVLTNGAYEDELVVGLRAGLNGALSGFPKNHHGYMV GYEPGTARRGKFGLPKVLAIMRKTLGSRYGNTKVPAGWEELEGITRAALFLGSNLLYPRDVAGIPIGDVHWVAALRSNAA RELSDEVRSVEEVASEVDADTVALLGGRFPAWGLALTLDELGVSEVLISDPDAWVERATVRLLDEELDATVHAMAGDDRK AVKEADAAFVTAVMPGIAERLAERTGAMTVC
Specific function: Unknown
COG id: COG4018
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.thermoautotrophicum MTH1137 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016760 [H]
Pfam domain/function: PF10113 Fibrillarin_2 [H]
EC number: NA
Molecular weight: Translated: 55098; Mature: 55098
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDLLHEACESLDAALELKRLAYEGKLSVDEVVTDLGELTDRELEALGDNLRTFPMGCDL CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCH IELAVGPCASDYSPDVLLANAILADRMGLPLHVCAYAVADVAENYGMRPIELFRRLVRNV HHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC RVPVDVDHIGAHGPMRFPRDITACEGTCYLEGPPFKECPRGRIHRRLIDKERQQGEDLEE CCCCCHHHCCCCCCCCCCCCCCCCCCEEEECCCCHHCCCHHHHHHHHHHHHHHCCCCHHH WAELAASICVNVTGEGGQDAEAHAAPLDEMKRVAETARHSGAGVGAILHVADGEDEFADG HHHHHHHHHEEECCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHH LKAAVEEVKADYLAVEGGPFNRAEDRLSAFRRAVVACRVFAPGKVVLTNGAYEDELVVGL HHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHEECCCEEEEECCCCCCHHHHHH RAGLNGALSGFPKNHHGYMVGYEPGTARRGKFGLPKVLAIMRKTLGSRYGNTKVPAGWEE HHCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHH LEGITRAALFLGSNLLYPRDVAGIPIGDVHWVAALRSNAARELSDEVRSVEEVASEVDAD HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH TVALLGGRFPAWGLALTLDELGVSEVLISDPDAWVERATVRLLDEELDATVHAMAGDDRK HHHHHCCCCCCCHHEEEHHHCCCHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH AVKEADAAFVTAVMPGIAERLAERTGAMTVC HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLDLLHEACESLDAALELKRLAYEGKLSVDEVVTDLGELTDRELEALGDNLRTFPMGCDL CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCH IELAVGPCASDYSPDVLLANAILADRMGLPLHVCAYAVADVAENYGMRPIELFRRLVRNV HHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC RVPVDVDHIGAHGPMRFPRDITACEGTCYLEGPPFKECPRGRIHRRLIDKERQQGEDLEE CCCCCHHHCCCCCCCCCCCCCCCCCCEEEECCCCHHCCCHHHHHHHHHHHHHHCCCCHHH WAELAASICVNVTGEGGQDAEAHAAPLDEMKRVAETARHSGAGVGAILHVADGEDEFADG HHHHHHHHHEEECCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHH LKAAVEEVKADYLAVEGGPFNRAEDRLSAFRRAVVACRVFAPGKVVLTNGAYEDELVVGL HHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHEECCCEEEEECCCCCCHHHHHH RAGLNGALSGFPKNHHGYMVGYEPGTARRGKFGLPKVLAIMRKTLGSRYGNTKVPAGWEE HHCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHH LEGITRAALFLGSNLLYPRDVAGIPIGDVHWVAALRSNAARELSDEVRSVEEVASEVDAD HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH TVALLGGRFPAWGLALTLDELGVSEVLISDPDAWVERATVRLLDEELDATVHAMAGDDRK HHHHHCCCCCCCHHEEEHHHCCCHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH AVKEADAAFVTAVMPGIAERLAERTGAMTVC HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]