Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197119433

Identifier: 197119433

GI number: 197119433

Start: 3549096

End: 3549833

Strand: Direct

Name: 197119433

Synonym: Gbem_3062

Alternate gene names: NA

Gene position: 3549096-3549833 (Clockwise)

Preceding gene: 197119431

Following gene: 197119436

Centisome position: 76.9

GC content: 56.5

Gene sequence:

>738_bases
ATGTGTGAGCAAAAAACGGTATTCATTGCAGGCGCAAGTGGAGCAATCGGGAGACAACTGTCTAAAATTTTGGTTAATGA
CGGATGGCGGGTTGTAGGAACTACCAGAACCGCCGGTAAAACGGCCATGATGAAAGAACTAGGTGTTGAACCCGTCATTG
TGGACGTGTTCGATGAAAATAAGCTGGCACAGGCGGTGCGTGAGGCCCAACCTGAGGTCGTTATCCATCAACTCACCGAC
CTGCCGTATGGACTCGATCCCGAGCTAATGGAAGCAGCTTTGGTCCGCAATGCAATCCTGAGAGAGGTCGGCACCCGAAA
CCTGGTTGCAGCCGCCTGCGCTGCTGGAGCAAAACGCCTGATCGCCCAAAGCATTGCCTTTGTATTCGAGCCTGGCCCGA
CCCCGTTCACAGAAGAGTCTCCTCTGCTGAACTTTGAGGATCCTGGCTACGGCCCGACGTCCAGGGCGGTGGCAAACCTC
GAACAGCAAGTCATGGACGCGCCGCTCGACGGGTTGGTATTGCGTTACGGGCTTATCTACGGGCCAGGAACCGGATTCGA
CAGCCCGCTGACCGAGATCGCGGCAACAGTGCATGTCGACGCTGCAGCCCACGCGGCACGCCTTGCTATAACCAATGGAA
CCCGCGGCATCTACAACGTCACCGACCCGGACGAGAGGGTCTCAAGTAGGAAAGCGGAAGAAACCTTTGGGTGGACTGCT
GACTTTCGGGCCTCGTAG

Upstream 100 bases:

>100_bases
TGAGAAACGGGTTTGGCACGGGAGTGGCTCTAGGGTTTTTCAAGAGGCCAAGAACGTCCGTGTGACGTTTGGTCAAACAC
CACAACAAGGAGAATAGGTA

Downstream 100 bases:

>100_bases
CGCAGCTGCTACAATTAGTCCCCTACCAGTAAAACATCCAACGAAGTGTCTGAAACAAAGGCCCCTTGGCATACACCAAG
GGGCCTTTGGAAATTATGAT

Product: hypothetical protein

Products: NA

Alternate protein names: DTDP-Glucose 4 6-Dehydratase; Dehydrogenase; Steroid Protein ; Epimerase/Dehydratase; NAD Dependent Epimerase/Dehydratase Family; Nucleoside-Diphosphate-Sugar Epimerase; Glucose Epimerase Protein; Carbon-Nitrogen Family Hydrolase

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MCEQKTVFIAGASGAIGRQLSKILVNDGWRVVGTTRTAGKTAMMKELGVEPVIVDVFDENKLAQAVREAQPEVVIHQLTD
LPYGLDPELMEAALVRNAILREVGTRNLVAAACAAGAKRLIAQSIAFVFEPGPTPFTEESPLLNFEDPGYGPTSRAVANL
EQQVMDAPLDGLVLRYGLIYGPGTGFDSPLTEIAATVHVDAAAHAARLAITNGTRGIYNVTDPDERVSSRKAEETFGWTA
DFRAS

Sequences:

>Translated_245_residues
MCEQKTVFIAGASGAIGRQLSKILVNDGWRVVGTTRTAGKTAMMKELGVEPVIVDVFDENKLAQAVREAQPEVVIHQLTD
LPYGLDPELMEAALVRNAILREVGTRNLVAAACAAGAKRLIAQSIAFVFEPGPTPFTEESPLLNFEDPGYGPTSRAVANL
EQQVMDAPLDGLVLRYGLIYGPGTGFDSPLTEIAATVHVDAAAHAARLAITNGTRGIYNVTDPDERVSSRKAEETFGWTA
DFRAS
>Mature_245_residues
MCEQKTVFIAGASGAIGRQLSKILVNDGWRVVGTTRTAGKTAMMKELGVEPVIVDVFDENKLAQAVREAQPEVVIHQLTD
LPYGLDPELMEAALVRNAILREVGTRNLVAAACAAGAKRLIAQSIAFVFEPGPTPFTEESPLLNFEDPGYGPTSRAVANL
EQQVMDAPLDGLVLRYGLIYGPGTGFDSPLTEIAATVHVDAAAHAARLAITNGTRGIYNVTDPDERVSSRKAEETFGWTA
DFRAS

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26225; Mature: 26225

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCEQKTVFIAGASGAIGRQLSKILVNDGWRVVGTTRTAGKTAMMKELGVEPVIVDVFDEN
CCCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCEEEEEECCCH
KLAQAVREAQPEVVIHQLTDLPYGLDPELMEAALVRNAILREVGTRNLVAAACAAGAKRL
HHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IAQSIAFVFEPGPTPFTEESPLLNFEDPGYGPTSRAVANLEQQVMDAPLDGLVLRYGLIY
HHHHHHHEECCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCEE
GPGTGFDSPLTEIAATVHVDAAAHAARLAITNGTRGIYNVTDPDERVSSRKAEETFGWTA
CCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCEEECCCHHHHHHHHHHHHHCCCCC
DFRAS
CCCCC
>Mature Secondary Structure
MCEQKTVFIAGASGAIGRQLSKILVNDGWRVVGTTRTAGKTAMMKELGVEPVIVDVFDEN
CCCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCEEEEEECCCH
KLAQAVREAQPEVVIHQLTDLPYGLDPELMEAALVRNAILREVGTRNLVAAACAAGAKRL
HHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IAQSIAFVFEPGPTPFTEESPLLNFEDPGYGPTSRAVANLEQQVMDAPLDGLVLRYGLIY
HHHHHHHEECCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCEE
GPGTGFDSPLTEIAATVHVDAAAHAARLAITNGTRGIYNVTDPDERVSSRKAEETFGWTA
CCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCEEECCCHHHHHHHHHHHHHCCCCC
DFRAS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA