Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197119436

Identifier: 197119436

GI number: 197119436

Start: 3552160

End: 3552534

Strand: Direct

Name: 197119436

Synonym: Gbem_3065

Alternate gene names: NA

Gene position: 3552160-3552534 (Clockwise)

Preceding gene: 197119433

Following gene: 197119437

Centisome position: 76.97

GC content: 46.93

Gene sequence:

>375_bases
ATGAAAACAAAAGACCTAATCACAATTTGGGGGGCTCCTGAGCCACCCCGCCTTGCACCGAAGCAGTTTTCGATCCGCTT
ACCAATGCTGGTCTCAGCCAAGATTTCCGCTCTATGCGAAATGTTCCCGAAGAAGACCAAGACAGAGATAATTGGCGATC
TCCTTACAACTGCCCTATATCAGTTGGAGCGTGACTTTCCTACGGAACAGGGCCGACCTCTTTTCGATCACCCCGAGACC
GGTGAAACCATATACGAAGATGTAGGTATAGGAACTTCATTCCGTCGCCTAACCGAAAAGCATCTTCGCGAAATTGAAAA
GGATGCCGGAGTAACTGACCCAATGCCATATGTTACAAATCAAGATTGTTATTAA

Upstream 100 bases:

>100_bases
GAAGGCACCATAAAGCCCTCCTCGGCAATTGTCAAAAATTTTATATAAAACTTGACAACACCCGTTTAGGTTTTGTATAA
GTTTTATCGGGAGGTACTCG

Downstream 100 bases:

>100_bases
CTATAAACCCTGCAAAAGGAGGTGATACCGATGAAAGTGCTTGAAATCGATTTCCGACAGCTTCCCCTGGTGGTCAAGAT
ACAGGGCAACGCTAAGACAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MKTKDLITIWGAPEPPRLAPKQFSIRLPMLVSAKISALCEMFPKKTKTEIIGDLLTTALYQLERDFPTEQGRPLFDHPET
GETIYEDVGIGTSFRRLTEKHLREIEKDAGVTDPMPYVTNQDCY

Sequences:

>Translated_124_residues
MKTKDLITIWGAPEPPRLAPKQFSIRLPMLVSAKISALCEMFPKKTKTEIIGDLLTTALYQLERDFPTEQGRPLFDHPET
GETIYEDVGIGTSFRRLTEKHLREIEKDAGVTDPMPYVTNQDCY
>Mature_124_residues
MKTKDLITIWGAPEPPRLAPKQFSIRLPMLVSAKISALCEMFPKKTKTEIIGDLLTTALYQLERDFPTEQGRPLFDHPET
GETIYEDVGIGTSFRRLTEKHLREIEKDAGVTDPMPYVTNQDCY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14142; Mature: 14142

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKDLITIWGAPEPPRLAPKQFSIRLPMLVSAKISALCEMFPKKTKTEIIGDLLTTALY
CCCCCEEEECCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
QLERDFPTEQGRPLFDHPETGETIYEDVGIGTSFRRLTEKHLREIEKDAGVTDPMPYVTN
HHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
QDCY
CCCC
>Mature Secondary Structure
MKTKDLITIWGAPEPPRLAPKQFSIRLPMLVSAKISALCEMFPKKTKTEIIGDLLTTALY
CCCCCEEEECCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
QLERDFPTEQGRPLFDHPETGETIYEDVGIGTSFRRLTEKHLREIEKDAGVTDPMPYVTN
HHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
QDCY
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA