Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197119113

Identifier: 197119113

GI number: 197119113

Start: 3167693

End: 3169525

Strand: Reverse

Name: 197119113

Synonym: Gbem_2740

Alternate gene names: NA

Gene position: 3169525-3167693 (Counterclockwise)

Preceding gene: 197119114

Following gene: 197119110

Centisome position: 68.68

GC content: 60.56

Gene sequence:

>1833_bases
GTGGCTCTTTTCTCTAAGATGCGCGCTGTACTCATGTTGCTGCTCATTCCGGTCGCCGCTTCCGCAGCCCCGCTTGATGA
CTACTACCTCTCGAAATTAGGGGAGCGGGCTCAGTTGGCCAAGGCTTTGAGCGCGGTGGTGGGGCTTGAGACCGGGCCTG
CCGAGCGCTGCCGCACCGGCCTCTATCGCAGCTTGAAGCGCGACTTCAAGGCGCTGGAACCCGCCACCCAGAAGACGCTG
GCGAAATACGTCGCAAGGCCTGTCCTCTCGTCGGAGGCTGTCTATGTCTCCCCTGGCGGACACTTCAACATCCACTACGC
GACCTCCGGTTCCGATGCTCCCGTGCTTACCGACACCACCCCCGCCAACGGGATCCCGGACTGGGTCGAACGCGTGGCCC
AGGTTTTCGAATACGTCTATGCCGACGAGGTAACCGCCAAGGGTTACCGCCCGCCTCCGGTCAGCGGCAGATACGACGTG
TATCTCCGTGACCTTCTAACCGAGCAGGCCTACGGTTATACCAAGTTCGACAGCGTGCCTGCCTCCGCAGTCTCGGTGCC
GAGCTATATCGAGATTGACAAGGCTTTCAGCGACCATATCTTCACTGTCAATGGCTTATACAGCAGCGATCAGATGCTGC
AGATCACGGCTGCCCACGAGTTTCATCACGCCATCCAGTTCGGCTATAACTACTACTTCGATATCTGGTACGGCGAAGTC
ACCTCCACCTGGATGGAGGATGAGGTGTACGACTCGGTGAACCAGTGTTACAGCTACCTTCCCAAGTACCTGCCCTTGGC
AAGCACCATCTCCCTCAACATGGGTCTGTACCAGAATTCCGAGTACGGCCGCTGGATCTTCAACCGGTACCTCGCCGAAC
GCCATGGCGCCGGCGCGGTAAAGGCCGCGTGGGAGAAGCTGGCCACGCTGCAGCCTTCCAGCAGTCCGACCACCAGCGAC
GGGGACATTCAGATGGGGCCGGTGCTGGACTCGGTGCTCTCAACCTCTTACAGCAGCAGCCTCAGCGCCGATTTCCTGGG
TTTTGCCAAGAAGGTCTACACCAGAGACTGGAATACCCACATACCTGACATAAGTATGATCCCGCTCCATGCTGTCGCGG
CTACGTACTCCTCCTATCCGGTCAACATCAGTTCCACCGATAGGCCGTCGGTCACCCTGCCGCGGTATACCTTTGCCTTT
TACCGGTTCGTTCCCTCGCCGGTCATCACCACCTTCAACGTGAGGATCACCAAGACCAGCGGCATCCAGACCGCCCTCTT
CAAGAAAGAAAGCGGGGTGGTGAGCGAAATAAGTGCCGACACTGGCGGCAACGCTTATTCGGTAATAGGTTTCAACGCGC
TCAACCCTGCCAGCGACGAGGTGGTGCTGCTTGTGGCCAATACCACCGACGTCGACAACCACCAGGCCAATTTCAGCACT
GACGGGAGCTCCTTGAATGTCTCCGAGCCGACCGTGGCTGCTTCGGCGGGGGGCGGGGGAGGCTCAAGCGGCGGCGGCTG
CTTCATCGCCACCGCGGCATATGGGAGTTACCTGCATCCCAAGGTCGCCGAGCTGAGACAATTCCGGGACCGCCATCTTC
TCACCAACGCACCGGGGCGGCTCTTCGTCTCGCTCTATTACCGGCTCAGCCCGCCGATCGCCGAGATCATCGCGGAGCAC
GAATGGATGAAGGGTGGGGTGAGGGTTATGCTGGTGCCGGTGGTGCTGTCGGTCGAGCACCCGGCGGGAGCGCTGGCGGC
AGTACTGCTGCTGATGGGAGGAGCGGGGGTGGTGAGGCGGAGGAAGCTCGCCCTGGTCCGGGTGCGGCGGTAA

Upstream 100 bases:

>100_bases
GCAGCTATAAGATCGGCGCCAGGGGCGCGGTCGAGGTCAAGGTGACAAAAGGCAGTACAACATTTGCTCCGCTTCGCGTG
GGCAAAAGGATGGTGGACTA

Downstream 100 bases:

>100_bases
CTAAAATCAATTCTCCCTCTCCCTTTGGGAGAGGGTTGGGGTGAGGGACTTTCCTTGAGGGAGAGGGTACTTAAAGGGGG
CGTCCAGAGTTCAAACTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 610; Mature: 609

Protein sequence:

>610_residues
MALFSKMRAVLMLLLIPVAASAAPLDDYYLSKLGERAQLAKALSAVVGLETGPAERCRTGLYRSLKRDFKALEPATQKTL
AKYVARPVLSSEAVYVSPGGHFNIHYATSGSDAPVLTDTTPANGIPDWVERVAQVFEYVYADEVTAKGYRPPPVSGRYDV
YLRDLLTEQAYGYTKFDSVPASAVSVPSYIEIDKAFSDHIFTVNGLYSSDQMLQITAAHEFHHAIQFGYNYYFDIWYGEV
TSTWMEDEVYDSVNQCYSYLPKYLPLASTISLNMGLYQNSEYGRWIFNRYLAERHGAGAVKAAWEKLATLQPSSSPTTSD
GDIQMGPVLDSVLSTSYSSSLSADFLGFAKKVYTRDWNTHIPDISMIPLHAVAATYSSYPVNISSTDRPSVTLPRYTFAF
YRFVPSPVITTFNVRITKTSGIQTALFKKESGVVSEISADTGGNAYSVIGFNALNPASDEVVLLVANTTDVDNHQANFST
DGSSLNVSEPTVAASAGGGGGSSGGGCFIATAAYGSYLHPKVAELRQFRDRHLLTNAPGRLFVSLYYRLSPPIAEIIAEH
EWMKGGVRVMLVPVVLSVEHPAGALAAVLLLMGGAGVVRRRKLALVRVRR

Sequences:

>Translated_610_residues
MALFSKMRAVLMLLLIPVAASAAPLDDYYLSKLGERAQLAKALSAVVGLETGPAERCRTGLYRSLKRDFKALEPATQKTL
AKYVARPVLSSEAVYVSPGGHFNIHYATSGSDAPVLTDTTPANGIPDWVERVAQVFEYVYADEVTAKGYRPPPVSGRYDV
YLRDLLTEQAYGYTKFDSVPASAVSVPSYIEIDKAFSDHIFTVNGLYSSDQMLQITAAHEFHHAIQFGYNYYFDIWYGEV
TSTWMEDEVYDSVNQCYSYLPKYLPLASTISLNMGLYQNSEYGRWIFNRYLAERHGAGAVKAAWEKLATLQPSSSPTTSD
GDIQMGPVLDSVLSTSYSSSLSADFLGFAKKVYTRDWNTHIPDISMIPLHAVAATYSSYPVNISSTDRPSVTLPRYTFAF
YRFVPSPVITTFNVRITKTSGIQTALFKKESGVVSEISADTGGNAYSVIGFNALNPASDEVVLLVANTTDVDNHQANFST
DGSSLNVSEPTVAASAGGGGGSSGGGCFIATAAYGSYLHPKVAELRQFRDRHLLTNAPGRLFVSLYYRLSPPIAEIIAEH
EWMKGGVRVMLVPVVLSVEHPAGALAAVLLLMGGAGVVRRRKLALVRVRR
>Mature_609_residues
ALFSKMRAVLMLLLIPVAASAAPLDDYYLSKLGERAQLAKALSAVVGLETGPAERCRTGLYRSLKRDFKALEPATQKTLA
KYVARPVLSSEAVYVSPGGHFNIHYATSGSDAPVLTDTTPANGIPDWVERVAQVFEYVYADEVTAKGYRPPPVSGRYDVY
LRDLLTEQAYGYTKFDSVPASAVSVPSYIEIDKAFSDHIFTVNGLYSSDQMLQITAAHEFHHAIQFGYNYYFDIWYGEVT
STWMEDEVYDSVNQCYSYLPKYLPLASTISLNMGLYQNSEYGRWIFNRYLAERHGAGAVKAAWEKLATLQPSSSPTTSDG
DIQMGPVLDSVLSTSYSSSLSADFLGFAKKVYTRDWNTHIPDISMIPLHAVAATYSSYPVNISSTDRPSVTLPRYTFAFY
RFVPSPVITTFNVRITKTSGIQTALFKKESGVVSEISADTGGNAYSVIGFNALNPASDEVVLLVANTTDVDNHQANFSTD
GSSLNVSEPTVAASAGGGGGSSGGGCFIATAAYGSYLHPKVAELRQFRDRHLLTNAPGRLFVSLYYRLSPPIAEIIAEHE
WMKGGVRVMLVPVVLSVEHPAGALAAVLLLMGGAGVVRRRKLALVRVRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66580; Mature: 66449

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALFSKMRAVLMLLLIPVAASAAPLDDYYLSKLGERAQLAKALSAVVGLETGPAERCRTG
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHH
LYRSLKRDFKALEPATQKTLAKYVARPVLSSEAVYVSPGGHFNIHYATSGSDAPVLTDTT
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEEEECCCCCCEEECCC
PANGIPDWVERVAQVFEYVYADEVTAKGYRPPPVSGRYDVYLRDLLTEQAYGYTKFDSVP
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
ASAVSVPSYIEIDKAFSDHIFTVNGLYSSDQMLQITAAHEFHHAIQFGYNYYFDIWYGEV
CHHHCCCCCEEHHHHHCCCEEEEECCCCCCCEEEEEHHHHHHHHHHHCCEEEEEEEECCH
TSTWMEDEVYDSVNQCYSYLPKYLPLASTISLNMGLYQNSEYGRWIFNRYLAERHGAGAV
HHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEECEEECCCCHHHHHHHHHHHHCCCCHH
KAAWEKLATLQPSSSPTTSDGDIQMGPVLDSVLSTSYSSSLSADFLGFAKKVYTRDWNTH
HHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC
IPDISMIPLHAVAATYSSYPVNISSTDRPSVTLPRYTFAFYRFVPSPVITTFNVRITKTS
CCCCEEHHHHHHHHHHCCCCEECCCCCCCCEECCHHHHHHHHHCCCCEEEEEEEEEEECC
GIQTALFKKESGVVSEISADTGGNAYSVIGFNALNPASDEVVLLVANTTDVDNHQANFST
CCEEEEHCCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCC
DGSSLNVSEPTVAASAGGGGGSSGGGCFIATAAYGSYLHPKVAELRQFRDRHLLTNAPGR
CCCEEECCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCC
LFVSLYYRLSPPIAEIIAEHEWMKGGVRVMLVPVVLSVEHPAGALAAVLLLMGGAGVVRR
EEEEEHHHCCCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHCCCCHHHH
RKLALVRVRR
HHHHEEEECC
>Mature Secondary Structure 
ALFSKMRAVLMLLLIPVAASAAPLDDYYLSKLGERAQLAKALSAVVGLETGPAERCRTG
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHH
LYRSLKRDFKALEPATQKTLAKYVARPVLSSEAVYVSPGGHFNIHYATSGSDAPVLTDTT
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEEEECCCCCCEEECCC
PANGIPDWVERVAQVFEYVYADEVTAKGYRPPPVSGRYDVYLRDLLTEQAYGYTKFDSVP
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
ASAVSVPSYIEIDKAFSDHIFTVNGLYSSDQMLQITAAHEFHHAIQFGYNYYFDIWYGEV
CHHHCCCCCEEHHHHHCCCEEEEECCCCCCCEEEEEHHHHHHHHHHHCCEEEEEEEECCH
TSTWMEDEVYDSVNQCYSYLPKYLPLASTISLNMGLYQNSEYGRWIFNRYLAERHGAGAV
HHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEECEEECCCCHHHHHHHHHHHHCCCCHH
KAAWEKLATLQPSSSPTTSDGDIQMGPVLDSVLSTSYSSSLSADFLGFAKKVYTRDWNTH
HHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC
IPDISMIPLHAVAATYSSYPVNISSTDRPSVTLPRYTFAFYRFVPSPVITTFNVRITKTS
CCCCEEHHHHHHHHHHCCCCEECCCCCCCCEECCHHHHHHHHHCCCCEEEEEEEEEEECC
GIQTALFKKESGVVSEISADTGGNAYSVIGFNALNPASDEVVLLVANTTDVDNHQANFST
CCEEEEHCCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCC
DGSSLNVSEPTVAASAGGGGGSSGGGCFIATAAYGSYLHPKVAELRQFRDRHLLTNAPGR
CCCEEECCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCC
LFVSLYYRLSPPIAEIIAEHEWMKGGVRVMLVPVVLSVEHPAGALAAVLLLMGGAGVVRR
EEEEEHHHCCCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHCCCCHHHH
RKLALVRVRR
HHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA