| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197119114
Identifier: 197119114
GI number: 197119114
Start: 3169525
End: 3170031
Strand: Reverse
Name: 197119114
Synonym: Gbem_2741
Alternate gene names: NA
Gene position: 3170031-3169525 (Counterclockwise)
Preceding gene: 197119115
Following gene: 197119113
Centisome position: 68.69
GC content: 61.74
Gene sequence:
>507_bases ATGAGAGTATTTCCTTCGTTATTGCTGTTGACCCTGAGTGTGATGCTCTTTTCCTTCGATGCCAGCGCTCTGGCGCGGCG ACCCGCCGGGCAGTGGGCCTACTTTCATTTCGAGGGCGGGCAGTTCATCCCAAGTAAGCCTGAGGCTGGAATCTTCATCG CGGTCCAGGACGGGGTGCAGCCTATAGTGACGGCCCGGGCGGAAACGCTCCGGGGGGTACCGCTTCCTGCCGGGACCGGC GCGGTTGTGGGTATCTGCTATGTACAGTCGTCCGGGGGAAAGCTTCGCACCGGCTCCGGTTTTGACGCGGTGCCGCTGAT CCCGGTCGAGATCTCTGCCGGCGGCAAGCCGGTTGCGACGGTCGAAACCGACAGTAACGGGTACTTCGTGGCGGCACTCC CTCCCGGCAGCTATAAGATCGGCGCCAGGGGCGCGGTCGAGGTCAAGGTGACAAAAGGCAGTACAACATTTGCTCCGCTT CGCGTGGGCAAAAGGATGGTGGACTAG
Upstream 100 bases:
>100_bases TTTTAAAATGCTCCCTTGTCTTCAGCTTCCCTTCGGCTTGCCAGGGAGCATTTTCTCTCAACCATTTTGACATGCCACCC GATACATAATGGTACCTGCT
Downstream 100 bases:
>100_bases TGGCTCTTTTCTCTAAGATGCGCGCTGTACTCATGTTGCTGCTCATTCCGGTCGCCGCTTCCGCAGCCCCGCTTGATGAC TACTACCTCTCGAAATTAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MRVFPSLLLLTLSVMLFSFDASALARRPAGQWAYFHFEGGQFIPSKPEAGIFIAVQDGVQPIVTARAETLRGVPLPAGTG AVVGICYVQSSGGKLRTGSGFDAVPLIPVEISAGGKPVATVETDSNGYFVAALPPGSYKIGARGAVEVKVTKGSTTFAPL RVGKRMVD
Sequences:
>Translated_168_residues MRVFPSLLLLTLSVMLFSFDASALARRPAGQWAYFHFEGGQFIPSKPEAGIFIAVQDGVQPIVTARAETLRGVPLPAGTG AVVGICYVQSSGGKLRTGSGFDAVPLIPVEISAGGKPVATVETDSNGYFVAALPPGSYKIGARGAVEVKVTKGSTTFAPL RVGKRMVD >Mature_168_residues MRVFPSLLLLTLSVMLFSFDASALARRPAGQWAYFHFEGGQFIPSKPEAGIFIAVQDGVQPIVTARAETLRGVPLPAGTG AVVGICYVQSSGGKLRTGSGFDAVPLIPVEISAGGKPVATVETDSNGYFVAALPPGSYKIGARGAVEVKVTKGSTTFAPL RVGKRMVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17497; Mature: 17497
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVFPSLLLLTLSVMLFSFDASALARRPAGQWAYFHFEGGQFIPSKPEAGIFIAVQDGVQ CCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEEECCCEECCCCCCCCEEEEECCCCC PIVTARAETLRGVPLPAGTGAVVGICYVQSSGGKLRTGSGFDAVPLIPVEISAGGKPVAT EEEHHHHHHHCCCCCCCCCCCEEEEEEEECCCCEEEECCCCCCCEEEEEEECCCCCEEEE VETDSNGYFVAALPPGSYKIGARGAVEVKVTKGSTTFAPLRVGKRMVD EEECCCCEEEEEECCCCEEECCCCEEEEEEECCCCEEEHHHCCCCCCC >Mature Secondary Structure MRVFPSLLLLTLSVMLFSFDASALARRPAGQWAYFHFEGGQFIPSKPEAGIFIAVQDGVQ CCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEEECCCEECCCCCCCCEEEEECCCCC PIVTARAETLRGVPLPAGTGAVVGICYVQSSGGKLRTGSGFDAVPLIPVEISAGGKPVAT EEEHHHHHHHCCCCCCCCCCCEEEEEEEECCCCEEEECCCCCCCEEEEEEECCCCCEEEE VETDSNGYFVAALPPGSYKIGARGAVEVKVTKGSTTFAPLRVGKRMVD EEECCCCEEEEEECCCCEEECCCCEEEEEEECCCCEEEHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA