| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118902
Identifier: 197118902
GI number: 197118902
Start: 2927236
End: 2927553
Strand: Direct
Name: 197118902
Synonym: Gbem_2525
Alternate gene names: NA
Gene position: 2927236-2927553 (Clockwise)
Preceding gene: 197118901
Following gene: 197118903
Centisome position: 63.43
GC content: 47.8
Gene sequence:
>318_bases ATGTATGGGTACCAGTTGACATTTTTTACCCAGCAGGATCGAACACATAAGAATCGGTGTCTGGGGGAATGGCTCATCGA GGAGGCGCTTTGCATGGGCATCAAAGGCGCAACGATGTTCACTGCAGCAGAAGGTTTTGGTCGAGAGCGAAAGCTACACT TCGTAGGATATTTTGATGTCTCCGATCAACCGATAGAGGTCTCCATGGCGGTCAGCGAGGAGGCGGCCAGCATATTTTTA GAACATTTGAAACAGGAAGGAATCGATGTCTTTTATATCAAGTCGCCTATCGAATTCGGCACAACAGGGAATCGGTAA
Upstream 100 bases:
>100_bases GTCGGTCGTTTTCTAGTTTCACGAGACAGGGGTATTACCAATTACGCCCCCAATACCGGATCTCGCTACCATTCATAAAG CAATATGGGAGGGAAAGACA
Downstream 100 bases:
>100_bases GCGATCCGACGGCTTTACAAGCTTCGTTTAACACTTGTCTGGGGTAGATCATGCGGTTTGGAAATGAAAACGACTTTGAC ATGACTGGAGAGTTCGCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MYGYQLTFFTQQDRTHKNRCLGEWLIEEALCMGIKGATMFTAAEGFGRERKLHFVGYFDVSDQPIEVSMAVSEEAASIFL EHLKQEGIDVFYIKSPIEFGTTGNR
Sequences:
>Translated_105_residues MYGYQLTFFTQQDRTHKNRCLGEWLIEEALCMGIKGATMFTAAEGFGRERKLHFVGYFDVSDQPIEVSMAVSEEAASIFL EHLKQEGIDVFYIKSPIEFGTTGNR >Mature_105_residues MYGYQLTFFTQQDRTHKNRCLGEWLIEEALCMGIKGATMFTAAEGFGRERKLHFVGYFDVSDQPIEVSMAVSEEAASIFL EHLKQEGIDVFYIKSPIEFGTTGNR
Specific function: Unknown
COG id: COG1993
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11981; Mature: 11981
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYGYQLTFFTQQDRTHKNRCLGEWLIEEALCMGIKGATMFTAAEGFGRERKLHFVGYFDV CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEEEECC SDQPIEVSMAVSEEAASIFLEHLKQEGIDVFYIKSPIEFGTTGNR CCCCEEEEEEECHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure MYGYQLTFFTQQDRTHKNRCLGEWLIEEALCMGIKGATMFTAAEGFGRERKLHFVGYFDV CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEEEECC SDQPIEVSMAVSEEAASIFLEHLKQEGIDVFYIKSPIEFGTTGNR CCCCEEEEEEECHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA