| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is ptsP [H]
Identifier: 197118893
GI number: 197118893
Start: 2916223
End: 2918565
Strand: Direct
Name: ptsP [H]
Synonym: Gbem_2516
Alternate gene names: 197118893
Gene position: 2916223-2918565 (Clockwise)
Preceding gene: 197118891
Following gene: 197118895
Centisome position: 63.19
GC content: 62.7
Gene sequence:
>2343_bases ATGCCGGAGGAGACAGGGGAACAACTGGGACTGAGGACACTGGAGGACATCAGCATGCTGATCCTTCACTCCCACGATCT GCAGGAGACCCTGGATAATATAGTCAACCTCGTTGCTAAGAGAATGTCCTCCGACGTCTGTTCCATCTACCTTCTGGAGG AGGACGGCGAGACCCTGAGGCTGCACGCGACCCGCGGTCTCTCCAGGCTCTCCGTCGGCATCACCATGAAGACCTCGGAA GGCCTCACCGGCCTCGCCATCGAGCAGCGCGGCGTAGTGGCGACGGACAACGCGCCGCGGCACCCGCGCTACAAGTACTT CAGGCAGACCAAGGAGGAAAAGGTCCTTTCCTTCTTAGGCGTCCCCTTCTTCGAACGCAACAACCCCATCGGCGTCCTGG TCATACAAAACCGCGACGCGCGCACCTTCACCTCCCAGGAAATCAGCGCCGTCTCCACCATCGCCTGGCAGATCTCCAGC ATCGTTTCCAACGCAAAACTCCTCGACTCCGTCAGGAAGAAGGAAGAGGAGCGGGCTTTTTACGCAGCCGAGGTGGACCG GCTCCGCAAAACCGGGGTACTCAAGGATACCGGCCGCGCGAGCCGCAAGAGCCAGGGATCGGGAGTATTGACCGGGATCG GGATTTCCCCCGGTTTCGCAGTGGGGAGAATTTCGGTACTGCACCGTGGTGCGAGCGAAGAGGCGGTCCTGGAACAGGCG CGGCCGCGCGCCGAGGAACAGACCCGCTTCCTGCACGCGCTGGAGAAGGCGCGCATCCAGACCATCTATATGGAAAAGCG GGTGGGCCAGATCCTATCCGAGGCCGACGCCGCCATCTTCCACAGCCACCTGATGATACTGGAGGACCGCGGCTTCATCG GGAAGATCGGCGCGCTGATCGACGAGGGGCTGGGTGCCCAAACCGCGGTAAGCCAGGTGGTGGACAGCTACGTGGCGGCC TTCGCCCGGATGCAGGACCCCTACCTGCGCGAGCGCAGCGCCGACATGGAGGACATCGGGCGCAGGATCTGCGACGCGCT GAACGGCAGCAACCACAAGCACAGGGAACGCCTGCGCGACCCGCGGATCATCATCGCCCGGGAACTGCTCCCCTCCGACC TCGCCATCATGGACCACGGCAAGGTGACCGGCATCGCCACCGAGAAGGGGAACCAGAACGCCCACGCGGCGATCATGGCC CGGGCGCTCGGCATTCCTGCCGTCTTCGGGGTAGAGGGGCTGTTGAAAAAGGTCGGGGCTCGCTGCGAGGTGGTCGTTGA CGGCAACTCCGGCTGCGTCTACGTAAACCCGGACCAACGCATCAAGAAGGAATATCAGCGGCTGCAGGGGGAATTCGACC AGAAGCAGCGCGAGCTGGAAGGTATCCGGGACCTACCCGCCGTGACCACCGACGGCTGCACCGTCTCTCTTCTGGCCAAC ATCGGACTTCTGAGCGATTTGAGGGTAGCGCAGGCGCACGGAGCCGAGGGGGTCGGGCTGTACCGGACCGAGTTCCCGTT CATGAGCCGCAACTCGTTCCCCGGGCGCGTGGAGCAGGCCGCCATCTACCGCAAGGTGCTGGAAGGGTTCCCAGGGCTCC CGGTCACCATCAGGACCCTCGACATAGGCGGAGACAAGGAGCTTTCCTACTTCCCCCACCCAAAGGAAGACAACCCCTTC CTGGGGTGGCGCTCCATGCGCATCTCACTCGACCGCGAGGACATCTTCCGCGAGCAGTTGGCTGCGGTGCTTTTGGCGTC CGCCAGCGGCAGGTGCAACATCATGTTCCCCATGATCTCCGGCGTGGACGAAGTGCGCCGCATCAAGGGGATACTGGAAC AAGTGAAAGAAGAGCTGAGAAAAGATGGGAAGGAATTCGCCCAGGATATTGGGCTCGGGGTCATGGTAGAGCTGCCGGCG GCGGTGCTGGTAGCGGAGATGCTGGCCCGCGAGGTCGATTACCTGAGCATCGGGACCAACGACCTGATCCAGTACACCCT TGCCTGCGACAGGAACAATCCGCTGGTGAAGAAGTGGTACGACCCGTACCATCCTGCGGTCCTGCACTCGATCAAGAAGG TGGCGCAAGCGGCTGCGGGCGCGGGGAAGCCGGCGTCTTTGTGCGGCGAGATGGCGGGAGAACCGATCAACGCGGTCCTT TTGCTGGGGCTTGGGATACGCTGCTTCAGCCTTTCCGCGCCGAACATACCGCGCGTGAAAGAGGCCATACGCGCCATTTC CCTGGGGCAGGCGGAACAGATAGCCGGACAGGTGCTGCGGATGGAAAGTGCCCTCTCCATCAAGAGCTACCTGGAATCGG TACAGCGCGAGCTGGGGCTGTAA
Upstream 100 bases:
>100_bases TGCTTTGCCATCTTAAACGCCCGTTAAAATAGCATTAAAATACTTCACATATCATTTTTCTCATTTATACTGCCCCGAGA ACGCCACAAAGGGGATGAGA
Downstream 100 bases:
>100_bases GGCACAAGAGACAGCAGCCGGGGGCCGGATTATAGATCCCGGTCCCCGGCCATGTATCTCCAACAAGGGAAGGTCGATCT TTCGTTGTCAATTGTCAATT
Product: GAF domain-containing phosphoenolpyruvate--protein phosphotransferase PtsP
Products: NA
Alternate protein names: Phosphotransferase system, enzyme I [H]
Number of amino acids: Translated: 780; Mature: 779
Protein sequence:
>780_residues MPEETGEQLGLRTLEDISMLILHSHDLQETLDNIVNLVAKRMSSDVCSIYLLEEDGETLRLHATRGLSRLSVGITMKTSE GLTGLAIEQRGVVATDNAPRHPRYKYFRQTKEEKVLSFLGVPFFERNNPIGVLVIQNRDARTFTSQEISAVSTIAWQISS IVSNAKLLDSVRKKEEERAFYAAEVDRLRKTGVLKDTGRASRKSQGSGVLTGIGISPGFAVGRISVLHRGASEEAVLEQA RPRAEEQTRFLHALEKARIQTIYMEKRVGQILSEADAAIFHSHLMILEDRGFIGKIGALIDEGLGAQTAVSQVVDSYVAA FARMQDPYLRERSADMEDIGRRICDALNGSNHKHRERLRDPRIIIARELLPSDLAIMDHGKVTGIATEKGNQNAHAAIMA RALGIPAVFGVEGLLKKVGARCEVVVDGNSGCVYVNPDQRIKKEYQRLQGEFDQKQRELEGIRDLPAVTTDGCTVSLLAN IGLLSDLRVAQAHGAEGVGLYRTEFPFMSRNSFPGRVEQAAIYRKVLEGFPGLPVTIRTLDIGGDKELSYFPHPKEDNPF LGWRSMRISLDREDIFREQLAAVLLASASGRCNIMFPMISGVDEVRRIKGILEQVKEELRKDGKEFAQDIGLGVMVELPA AVLVAEMLAREVDYLSIGTNDLIQYTLACDRNNPLVKKWYDPYHPAVLHSIKKVAQAAAGAGKPASLCGEMAGEPINAVL LLGLGIRCFSLSAPNIPRVKEAIRAISLGQAEQIAGQVLRMESALSIKSYLESVQRELGL
Sequences:
>Translated_780_residues MPEETGEQLGLRTLEDISMLILHSHDLQETLDNIVNLVAKRMSSDVCSIYLLEEDGETLRLHATRGLSRLSVGITMKTSE GLTGLAIEQRGVVATDNAPRHPRYKYFRQTKEEKVLSFLGVPFFERNNPIGVLVIQNRDARTFTSQEISAVSTIAWQISS IVSNAKLLDSVRKKEEERAFYAAEVDRLRKTGVLKDTGRASRKSQGSGVLTGIGISPGFAVGRISVLHRGASEEAVLEQA RPRAEEQTRFLHALEKARIQTIYMEKRVGQILSEADAAIFHSHLMILEDRGFIGKIGALIDEGLGAQTAVSQVVDSYVAA FARMQDPYLRERSADMEDIGRRICDALNGSNHKHRERLRDPRIIIARELLPSDLAIMDHGKVTGIATEKGNQNAHAAIMA RALGIPAVFGVEGLLKKVGARCEVVVDGNSGCVYVNPDQRIKKEYQRLQGEFDQKQRELEGIRDLPAVTTDGCTVSLLAN IGLLSDLRVAQAHGAEGVGLYRTEFPFMSRNSFPGRVEQAAIYRKVLEGFPGLPVTIRTLDIGGDKELSYFPHPKEDNPF LGWRSMRISLDREDIFREQLAAVLLASASGRCNIMFPMISGVDEVRRIKGILEQVKEELRKDGKEFAQDIGLGVMVELPA AVLVAEMLAREVDYLSIGTNDLIQYTLACDRNNPLVKKWYDPYHPAVLHSIKKVAQAAAGAGKPASLCGEMAGEPINAVL LLGLGIRCFSLSAPNIPRVKEAIRAISLGQAEQIAGQVLRMESALSIKSYLESVQRELGL >Mature_779_residues PEETGEQLGLRTLEDISMLILHSHDLQETLDNIVNLVAKRMSSDVCSIYLLEEDGETLRLHATRGLSRLSVGITMKTSEG LTGLAIEQRGVVATDNAPRHPRYKYFRQTKEEKVLSFLGVPFFERNNPIGVLVIQNRDARTFTSQEISAVSTIAWQISSI VSNAKLLDSVRKKEEERAFYAAEVDRLRKTGVLKDTGRASRKSQGSGVLTGIGISPGFAVGRISVLHRGASEEAVLEQAR PRAEEQTRFLHALEKARIQTIYMEKRVGQILSEADAAIFHSHLMILEDRGFIGKIGALIDEGLGAQTAVSQVVDSYVAAF ARMQDPYLRERSADMEDIGRRICDALNGSNHKHRERLRDPRIIIARELLPSDLAIMDHGKVTGIATEKGNQNAHAAIMAR ALGIPAVFGVEGLLKKVGARCEVVVDGNSGCVYVNPDQRIKKEYQRLQGEFDQKQRELEGIRDLPAVTTDGCTVSLLANI GLLSDLRVAQAHGAEGVGLYRTEFPFMSRNSFPGRVEQAAIYRKVLEGFPGLPVTIRTLDIGGDKELSYFPHPKEDNPFL GWRSMRISLDREDIFREQLAAVLLASASGRCNIMFPMISGVDEVRRIKGILEQVKEELRKDGKEFAQDIGLGVMVELPAA VLVAEMLAREVDYLSIGTNDLIQYTLACDRNNPLVKKWYDPYHPAVLHSIKKVAQAAAGAGKPASLCGEMAGEPINAVLL LGLGIRCFSLSAPNIPRVKEAIRAISLGQAEQIAGQVLRMESALSIKSYLESVQRELGL
Specific function: General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their tr
COG id: COG3605
COG function: function code T; Signal transduction protein containing GAF and PtsI domains
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1788756, Length=556, Percent_Identity=42.2661870503597, Blast_Score=430, Evalue=1e-121, Organism=Escherichia coli, GI1789193, Length=784, Percent_Identity=33.5459183673469, Blast_Score=404, Evalue=1e-113, Organism=Escherichia coli, GI1788726, Length=580, Percent_Identity=33.6206896551724, Blast_Score=296, Evalue=3e-81, Organism=Escherichia coli, GI48994992, Length=501, Percent_Identity=33.1337325349301, Blast_Score=280, Evalue=3e-76, Organism=Escherichia coli, GI1787994, Length=405, Percent_Identity=25.9259259259259, Blast_Score=89, Evalue=1e-18,
Paralogues:
None
Copy number: 360 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2659 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 4,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008279 - InterPro: IPR006318 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR008731 - InterPro: IPR015813 [H]
Pfam domain/function: PF05524 PEP-utilisers_N; PF00391 PEP-utilizers; PF02896 PEP-utilizers_C [H]
EC number: =2.7.3.9 [H]
Molecular weight: Translated: 85946; Mature: 85815
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEETGEQLGLRTLEDISMLILHSHDLQETLDNIVNLVAKRMSSDVCSIYLLEEDGETLR CCCCCCHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEE LHATRGLSRLSVGITMKTSEGLTGLAIEQRGVVATDNAPRHPRYKYFRQTKEEKVLSFLG EEECCCCCEEEEEEEEECCCCCCEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHC VPFFERNNPIGVLVIQNRDARTFTSQEISAVSTIAWQISSIVSNAKLLDSVRKKEEERAF CCCEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YAAEVDRLRKTGVLKDTGRASRKSQGSGVLTGIGISPGFAVGRISVLHRGASEEAVLEQA HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHH RPRAEEQTRFLHALEKARIQTIYMEKRVGQILSEADAAIFHSHLMILEDRGFIGKIGALI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHH DEGLGAQTAVSQVVDSYVAAFARMQDPYLRERSADMEDIGRRICDALNGSNHKHRERLRD HCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCC PRIIIARELLPSDLAIMDHGKVTGIATEKGNQNAHAAIMARALGIPAVFGVEGLLKKVGA CCEEEEHHHCCCCCEEEECCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCC RCEVVVDGNSGCVYVNPDQRIKKEYQRLQGEFDQKQRELEGIRDLPAVTTDGCTVSLLAN EEEEEEECCCCEEEECCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHC IGLLSDLRVAQAHGAEGVGLYRTEFPFMSRNSFPGRVEQAAIYRKVLEGFPGLPVTIRTL CCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEE DIGGDKELSYFPHPKEDNPFLGWRSMRISLDREDIFREQLAAVLLASASGRCNIMFPMIS ECCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEHHHC GVDEVRRIKGILEQVKEELRKDGKEFAQDIGLGVMVELPAAVLVAEMLAREVDYLSIGTN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCEEECCCH DLIQYTLACDRNNPLVKKWYDPYHPAVLHSIKKVAQAAAGAGKPASLCGEMAGEPINAVL HHEEEEEEECCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHH LLGLGIRCFSLSAPNIPRVKEAIRAISLGQAEQIAGQVLRMESALSIKSYLESVQRELGL HHHCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PEETGEQLGLRTLEDISMLILHSHDLQETLDNIVNLVAKRMSSDVCSIYLLEEDGETLR CCCCCHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEE LHATRGLSRLSVGITMKTSEGLTGLAIEQRGVVATDNAPRHPRYKYFRQTKEEKVLSFLG EEECCCCCEEEEEEEEECCCCCCEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHC VPFFERNNPIGVLVIQNRDARTFTSQEISAVSTIAWQISSIVSNAKLLDSVRKKEEERAF CCCEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YAAEVDRLRKTGVLKDTGRASRKSQGSGVLTGIGISPGFAVGRISVLHRGASEEAVLEQA HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHH RPRAEEQTRFLHALEKARIQTIYMEKRVGQILSEADAAIFHSHLMILEDRGFIGKIGALI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHH DEGLGAQTAVSQVVDSYVAAFARMQDPYLRERSADMEDIGRRICDALNGSNHKHRERLRD HCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCC PRIIIARELLPSDLAIMDHGKVTGIATEKGNQNAHAAIMARALGIPAVFGVEGLLKKVGA CCEEEEHHHCCCCCEEEECCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCC RCEVVVDGNSGCVYVNPDQRIKKEYQRLQGEFDQKQRELEGIRDLPAVTTDGCTVSLLAN EEEEEEECCCCEEEECCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHC IGLLSDLRVAQAHGAEGVGLYRTEFPFMSRNSFPGRVEQAAIYRKVLEGFPGLPVTIRTL CCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEE DIGGDKELSYFPHPKEDNPFLGWRSMRISLDREDIFREQLAAVLLASASGRCNIMFPMIS ECCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEHHHC GVDEVRRIKGILEQVKEELRKDGKEFAQDIGLGVMVELPAAVLVAEMLAREVDYLSIGTN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCEEECCCH DLIQYTLACDRNNPLVKKWYDPYHPAVLHSIKKVAQAAAGAGKPASLCGEMAGEPINAVL HHEEEEEEECCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHH LLGLGIRCFSLSAPNIPRVKEAIRAISLGQAEQIAGQVLRMESALSIKSYLESVQRELGL HHHCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2457575; 2960675; 9205837; 9278503; 2411636; 3290198; 9298646; 7876255; 8805571; 9054557; 9541412; 10048929 [H]