| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118891
Identifier: 197118891
GI number: 197118891
Start: 2913964
End: 2915067
Strand: Direct
Name: 197118891
Synonym: Gbem_2514
Alternate gene names: NA
Gene position: 2913964-2915067 (Clockwise)
Preceding gene: 197118889
Following gene: 197118893
Centisome position: 63.14
GC content: 60.69
Gene sequence:
>1104_bases ATGGATCAAAAATATGACGTACTGATAGTAGGAGGCGGCCCCGGCGGAGTCGCCGCCGCCTACATCTGCCATAAGCTTGG CCTCTCCCACCTGCTGATTGAATCGGGCAAGGCTATCTTCCAGGGCATTGCCAATACCTACCCGGAAGGAAAGAACGTTT ACCCCTCCAAGCCCAAGGAGAACCCCGAGCCCTTCCTGGTAGAGGAACTGCGCCCGCCCGACAAACCGGTGACGGTGGAG AAATACATCCAGTACGTGCAGCACTTCGTGCAGCACGAAGGGCTGAACGTACTCACCGACACCCAGTTCGAGAACATCGA AGACGGCAGGGAGTACCTCAAGGTACTCACCTCCCGGGGGACTTTCCAGGCCAAAAGGGTCCTGCTCGCCTTCGGCAGTT CCATTCCGAAGGAGCTCTCCGTGTACGGAGACGCGAAGATGGTCGCCAAGGGGCTGGACGACCCGAAGAAATACATAGGG GTGCGCACGCTTGTCATCGGCGGCGGCAACAGCGCGGCCGACGTCATCATCTCCATCCTCAAGGAAAAGCGCAACGCCAA CGACACCGAACCGGTGTACTGGGCGCACGTTGCGGAGACCTTCGACGTGAACAAGGAGACAGCGCAAAGGCTGGGCGAGG AGATCCTCCTCGGGGGAAACATCCGGCTTTTGCCCGGCGCCACCCCGAGGATCGGCGAGGTCGACGACGAAGGTGTGGAC CGACTGGTGATCCGGGTAAGCGAGGACAAGATCCCCGGCGGGATCGAGCGCTACCACGCCATGAGCTTTCCCATGAAGAA CGTGATCGCCTGCATCGGCAGCCAGGGCCCCACCTCCATCTACGACCGGATCGGCGTGCAAACCATAGCCTGCGCCGAGG GGGTCTGCCAGGTAGCCAAGGAAGGGGACCGGCTGCTCCTCTTAACCTCCGACTTCGAGTCGACCCGCAAAGGGGTCTAC GTGATCGGTGGCGCCATCTCCCCCTCCTACATGCGGATCAACAAGGGGGCCATCCAGGAGGAGCGGCACCCGAACCTGAT CTACACCGCTGTGAACGACGCCCATCACGTCATCGACGCCATAGCCGCGAAGCTCAAAAAATAG
Upstream 100 bases:
>100_bases TGCCAAGGCCCTGTTCTCATTATTACTTTGAAGCAGAAGACTGTGCGTGTATAGTTAACACGTTACGCTCACTACAAATA CGCATCACCAGAGGTAGATC
Downstream 100 bases:
>100_bases CAGTTCAGCTGGGAAATAACCGCCGTGCCCACTCGGCCTATCGCCGCTCTCCTCCCCCTGGAGGGGGGAGGTCGGGAGGG GGGAAAGGGGGCGCCCCCTC
Product: FAD-dependent oxidoreductase
Products: NA
Alternate protein names: FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; FAD-Dependent Oxidoreductase
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MDQKYDVLIVGGGPGGVAAAYICHKLGLSHLLIESGKAIFQGIANTYPEGKNVYPSKPKENPEPFLVEELRPPDKPVTVE KYIQYVQHFVQHEGLNVLTDTQFENIEDGREYLKVLTSRGTFQAKRVLLAFGSSIPKELSVYGDAKMVAKGLDDPKKYIG VRTLVIGGGNSAADVIISILKEKRNANDTEPVYWAHVAETFDVNKETAQRLGEEILLGGNIRLLPGATPRIGEVDDEGVD RLVIRVSEDKIPGGIERYHAMSFPMKNVIACIGSQGPTSIYDRIGVQTIACAEGVCQVAKEGDRLLLLTSDFESTRKGVY VIGGAISPSYMRINKGAIQEERHPNLIYTAVNDAHHVIDAIAAKLKK
Sequences:
>Translated_367_residues MDQKYDVLIVGGGPGGVAAAYICHKLGLSHLLIESGKAIFQGIANTYPEGKNVYPSKPKENPEPFLVEELRPPDKPVTVE KYIQYVQHFVQHEGLNVLTDTQFENIEDGREYLKVLTSRGTFQAKRVLLAFGSSIPKELSVYGDAKMVAKGLDDPKKYIG VRTLVIGGGNSAADVIISILKEKRNANDTEPVYWAHVAETFDVNKETAQRLGEEILLGGNIRLLPGATPRIGEVDDEGVD RLVIRVSEDKIPGGIERYHAMSFPMKNVIACIGSQGPTSIYDRIGVQTIACAEGVCQVAKEGDRLLLLTSDFESTRKGVY VIGGAISPSYMRINKGAIQEERHPNLIYTAVNDAHHVIDAIAAKLKK >Mature_367_residues MDQKYDVLIVGGGPGGVAAAYICHKLGLSHLLIESGKAIFQGIANTYPEGKNVYPSKPKENPEPFLVEELRPPDKPVTVE KYIQYVQHFVQHEGLNVLTDTQFENIEDGREYLKVLTSRGTFQAKRVLLAFGSSIPKELSVYGDAKMVAKGLDDPKKYIG VRTLVIGGGNSAADVIISILKEKRNANDTEPVYWAHVAETFDVNKETAQRLGEEILLGGNIRLLPGATPRIGEVDDEGVD RLVIRVSEDKIPGGIERYHAMSFPMKNVIACIGSQGPTSIYDRIGVQTIACAEGVCQVAKEGDRLLLLTSDFESTRKGVY VIGGAISPSYMRINKGAIQEERHPNLIYTAVNDAHHVIDAIAAKLKK
Specific function: Unknown
COG id: COG0492
COG function: function code O; Thioredoxin reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40139; Mature: 40139
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQKYDVLIVGGGPGGVAAAYICHKLGLSHLLIESGKAIFQGIANTYPEGKNVYPSKPKE CCCCEEEEEEECCCHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCC NPEPFLVEELRPPDKPVTVEKYIQYVQHFVQHEGLNVLTDTQFENIEDGREYLKVLTSRG CCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCC TFQAKRVLLAFGSSIPKELSVYGDAKMVAKGLDDPKKYIGVRTLVIGGGNSAADVIISIL CHHHHHHHHHHCCCCCHHHHHCCCHHHHHHCCCCHHHHHCEEEEEEECCCHHHHHHHHHH KEKRNANDTEPVYWAHVAETFDVNKETAQRLGEEILLGGNIRLLPGATPRIGEVDDEGVD HHHCCCCCCCCEEEEEHHHHHCCCHHHHHHHHHHEEECCCEEECCCCCCCCCCCCCCCCC RLVIRVSEDKIPGGIERYHAMSFPMKNVIACIGSQGPTSIYDRIGVQTIACAEGVCQVAK EEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHC EGDRLLLLTSDFESTRKGVYVIGGAISPSYMRINKGAIQEERHPNLIYTAVNDAHHVIDA CCCEEEEEECCCHHHCCCEEEEECCCCCCCEEECCCCCCCCCCCCEEEEECCHHHHHHHH IAAKLKK HHHHHCC >Mature Secondary Structure MDQKYDVLIVGGGPGGVAAAYICHKLGLSHLLIESGKAIFQGIANTYPEGKNVYPSKPKE CCCCEEEEEEECCCHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCC NPEPFLVEELRPPDKPVTVEKYIQYVQHFVQHEGLNVLTDTQFENIEDGREYLKVLTSRG CCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCC TFQAKRVLLAFGSSIPKELSVYGDAKMVAKGLDDPKKYIGVRTLVIGGGNSAADVIISIL CHHHHHHHHHHCCCCCHHHHHCCCHHHHHHCCCCHHHHHCEEEEEEECCCHHHHHHHHHH KEKRNANDTEPVYWAHVAETFDVNKETAQRLGEEILLGGNIRLLPGATPRIGEVDDEGVD HHHCCCCCCCCEEEEEHHHHHCCCHHHHHHHHHHEEECCCEEECCCCCCCCCCCCCCCCC RLVIRVSEDKIPGGIERYHAMSFPMKNVIACIGSQGPTSIYDRIGVQTIACAEGVCQVAK EEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHC EGDRLLLLTSDFESTRKGVYVIGGAISPSYMRINKGAIQEERHPNLIYTAVNDAHHVIDA CCCEEEEEECCCHHHCCCEEEEECCCCCCCEEECCCCCCCCCCCCEEEEECCHHHHHHHH IAAKLKK HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA