Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118051

Identifier: 197118051

GI number: 197118051

Start: 1929811

End: 1931394

Strand: Direct

Name: 197118051

Synonym: Gbem_1664

Alternate gene names: NA

Gene position: 1929811-1931394 (Clockwise)

Preceding gene: 197118050

Following gene: 197118052

Centisome position: 41.81

GC content: 68.88

Gene sequence:

>1584_bases
ATGCCATTTCTGCTACGAAACCTCACCCTCTCCCCCGGAGAGGAGGAGCGCCTATTGCGCCCTCTGGCCGCGGCGAAGCT
GGGCGTGCCCGAGAGCGCCGTCACCTCCTTGTCGCTGGTTAGAAAAGGGGTCGACGCCCGCAAGAAGGGGAAGATCAAGC
TGGTCTACACGGTGCAGGTGACCGTTAAGGACGAGTCGCGGGTCAAGGAGGGGGGGGACGTCTCCCGAGTGGAGCCGGCC
GCAAGGGAAGAGTTCCCGAAGCTCGCCTCGAAGGAGCGCATCGTCATCGTCGGCATGGGGCCGGCCGGCCTCTTCGCGGC
GCTTAGGCTCGCCGAATACGGGCTTTCCGCCCTGGTCCTCGAGCGCGGACGGGAGGTGGAGAAAAGAGCCGCCGACGTTT
CCCGCTTCTGGCGCGCGGGGGAGCTCCTCCCCGAGAGCAACGTGCAGTTCGGCGAGGGGGGGGCGGGGACCTTTTCGGAC
GGCAAGCTCACCACGCGGGTGAAGGACGAGAACTGCGGCTGGGTGCTGAGGCAGCTCGTCCATTTCGGAGCGCCGCCGGA
GATCCTCTACGCTGCGAAGCCGCACATAGGTACGGACCGGCTGCGCGCCGTGGTGAAGGGGATCAGGGAGAGGCTGATCC
AGGCCGGTTTCGAGATCCGCTTCGAGAGCAGGGTGAGCGGGATCGGGCTTTCCGGCAACCGGGTGAGCGCGGTGATGGTG
AACGAGACCTCGGAGCACCCCTGCGACACGCTGCTGCTGGCGCCGGGCCACAGCGCGCGCGACACCTACGCCATGCTGCA
CCGGGCCGGGGTGGCGCTGGAGGCAAAGCCGTTCGCGGTGGGGCTTAGGGTAGAGCACCCGCAGGCCCTGATCGACGAGA
TCCAGTACGGCAGGAACCCGCATCCCCAGCTCCCGCCGGCCGAGTATGCGCAGGCCTACAACAACGAGAAGACCGGGCGC
TCCGCCTACTCCTTCTGCATGTGCCCGGGAGGGGTGGTGGTCGCAGCCGCCTCCGAGGCGGGCGGGGTCGTGGTGAACGG
GATGAGCGGCTACCGCCGCAACGGCCCCGGCGCCAACAGCGCGCTCGTTGTCACCGTGGGCCCGGCAGATTTCCCCGGCG
CCTCCCCGCTTTCCGGGATCGAGTTCCAGCGCGACCTGGAGCGGCGCGCCTTCGCGGCCGGGGGAGGGGGGTACCTGGCG
CCGGCGCAGAGCCTTATGGCCTTTCTGGGCGAGGGGAAGGGGAGGGTCGCTTCCAGCTATCGTCCGGGCGTCGTCGAATG
CGAGCTGACGCCGCTTCTCCCTCCTGCCGTCGCCGCGACGCTCAAGGAGGGGATTCGCCACTTCGACCGGAAGATGCGCG
GCTTCATGAGCGCCGAGGCTACCTTGACCGCGGTCGAGACCAGGACCTCGGCCCCCTTGCGCATCCTGCGGGCTCCCGAC
CTGCAGTCGGTCTCCCATCCGGGACTCTACCCCACAGGCGAGGGAGCGGGTTACGCCGGCGGTATCATGAGCGCCGCCCT
CGACGGGATCCGCGTGGCCGACGCCATCGCGGCGAGGCTTCGCGCCGAGAGCCAAAAGCCTTAG

Upstream 100 bases:

>100_bases
CACATCCCTAAATCCACCCCACCGCTGGACATCGTCATCATCGTCGAGCAGCTCCTGGAAAGAAAGAGGCGCGGCTCCAG
CGCCGCCTGACGGAAACCCC

Downstream 100 bases:

>100_bases
CAGTAGCACCAACCGGTTTCAAGCCTACAAGGAGCTTCATGTGAAAAAGAAATGCGTTGCCGAGATAAAGGACCGCGACC
TCGTGGAAGCGGTCTTCCTG

Product: FAD-dependent oxidoreductase

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 527; Mature: 526

Protein sequence:

>527_residues
MPFLLRNLTLSPGEEERLLRPLAAAKLGVPESAVTSLSLVRKGVDARKKGKIKLVYTVQVTVKDESRVKEGGDVSRVEPA
AREEFPKLASKERIVIVGMGPAGLFAALRLAEYGLSALVLERGREVEKRAADVSRFWRAGELLPESNVQFGEGGAGTFSD
GKLTTRVKDENCGWVLRQLVHFGAPPEILYAAKPHIGTDRLRAVVKGIRERLIQAGFEIRFESRVSGIGLSGNRVSAVMV
NETSEHPCDTLLLAPGHSARDTYAMLHRAGVALEAKPFAVGLRVEHPQALIDEIQYGRNPHPQLPPAEYAQAYNNEKTGR
SAYSFCMCPGGVVVAAASEAGGVVVNGMSGYRRNGPGANSALVVTVGPADFPGASPLSGIEFQRDLERRAFAAGGGGYLA
PAQSLMAFLGEGKGRVASSYRPGVVECELTPLLPPAVAATLKEGIRHFDRKMRGFMSAEATLTAVETRTSAPLRILRAPD
LQSVSHPGLYPTGEGAGYAGGIMSAALDGIRVADAIAARLRAESQKP

Sequences:

>Translated_527_residues
MPFLLRNLTLSPGEEERLLRPLAAAKLGVPESAVTSLSLVRKGVDARKKGKIKLVYTVQVTVKDESRVKEGGDVSRVEPA
AREEFPKLASKERIVIVGMGPAGLFAALRLAEYGLSALVLERGREVEKRAADVSRFWRAGELLPESNVQFGEGGAGTFSD
GKLTTRVKDENCGWVLRQLVHFGAPPEILYAAKPHIGTDRLRAVVKGIRERLIQAGFEIRFESRVSGIGLSGNRVSAVMV
NETSEHPCDTLLLAPGHSARDTYAMLHRAGVALEAKPFAVGLRVEHPQALIDEIQYGRNPHPQLPPAEYAQAYNNEKTGR
SAYSFCMCPGGVVVAAASEAGGVVVNGMSGYRRNGPGANSALVVTVGPADFPGASPLSGIEFQRDLERRAFAAGGGGYLA
PAQSLMAFLGEGKGRVASSYRPGVVECELTPLLPPAVAATLKEGIRHFDRKMRGFMSAEATLTAVETRTSAPLRILRAPD
LQSVSHPGLYPTGEGAGYAGGIMSAALDGIRVADAIAARLRAESQKP
>Mature_526_residues
PFLLRNLTLSPGEEERLLRPLAAAKLGVPESAVTSLSLVRKGVDARKKGKIKLVYTVQVTVKDESRVKEGGDVSRVEPAA
REEFPKLASKERIVIVGMGPAGLFAALRLAEYGLSALVLERGREVEKRAADVSRFWRAGELLPESNVQFGEGGAGTFSDG
KLTTRVKDENCGWVLRQLVHFGAPPEILYAAKPHIGTDRLRAVVKGIRERLIQAGFEIRFESRVSGIGLSGNRVSAVMVN
ETSEHPCDTLLLAPGHSARDTYAMLHRAGVALEAKPFAVGLRVEHPQALIDEIQYGRNPHPQLPPAEYAQAYNNEKTGRS
AYSFCMCPGGVVVAAASEAGGVVVNGMSGYRRNGPGANSALVVTVGPADFPGASPLSGIEFQRDLERRAFAAGGGGYLAP
AQSLMAFLGEGKGRVASSYRPGVVECELTPLLPPAVAATLKEGIRHFDRKMRGFMSAEATLTAVETRTSAPLRILRAPDL
QSVSHPGLYPTGEGAGYAGGIMSAALDGIRVADAIAARLRAESQKP

Specific function: Unknown

COG id: COG2509

COG function: function code R; Uncharacterized FAD-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 56133; Mature: 56002

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFLLRNLTLSPGEEERLLRPLAAAKLGVPESAVTSLSLVRKGVDARKKGKIKLVYTVQV
CCEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEE
TVKDESRVKEGGDVSRVEPAAREEFPKLASKERIVIVGMGPAGLFAALRLAEYGLSALVL
EECCHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCHHHHHH
ERGREVEKRAADVSRFWRAGELLPESNVQFGEGGAGTFSDGKLTTRVKDENCGWVLRQLV
HHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHH
HFGAPPEILYAAKPHIGTDRLRAVVKGIRERLIQAGFEIRFESRVSGIGLSGNRVSAVMV
HCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEE
NETSEHPCDTLLLAPGHSARDTYAMLHRAGVALEAKPFAVGLRVEHPQALIDEIQYGRNP
ECCCCCCCCEEEECCCCCCHHHHHHHHHCCCEEECCCEEEEEEECCHHHHHHHHHHCCCC
HPQLPPAEYAQAYNNEKTGRSAYSFCMCPGGVVVAAASEAGGVVVNGMSGYRRNGPGANS
CCCCCHHHHHHHHCCCCCCCHHHEEEECCCCEEEEEECCCCCEEEECCCCCCCCCCCCCC
ALVVTVGPADFPGASPLSGIEFQRDLERRAFAAGGGGYLAPAQSLMAFLGEGKGRVASSY
EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCC
RPGVVECELTPLLPPAVAATLKEGIRHFDRKMRGFMSAEATLTAVETRTSAPLRILRAPD
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEECCC
LQSVSHPGLYPTGEGAGYAGGIMSAALDGIRVADAIAARLRAESQKP
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PFLLRNLTLSPGEEERLLRPLAAAKLGVPESAVTSLSLVRKGVDARKKGKIKLVYTVQV
CEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEE
TVKDESRVKEGGDVSRVEPAAREEFPKLASKERIVIVGMGPAGLFAALRLAEYGLSALVL
EECCHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCHHHHHH
ERGREVEKRAADVSRFWRAGELLPESNVQFGEGGAGTFSDGKLTTRVKDENCGWVLRQLV
HHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHH
HFGAPPEILYAAKPHIGTDRLRAVVKGIRERLIQAGFEIRFESRVSGIGLSGNRVSAVMV
HCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEE
NETSEHPCDTLLLAPGHSARDTYAMLHRAGVALEAKPFAVGLRVEHPQALIDEIQYGRNP
ECCCCCCCCEEEECCCCCCHHHHHHHHHCCCEEECCCEEEEEEECCHHHHHHHHHHCCCC
HPQLPPAEYAQAYNNEKTGRSAYSFCMCPGGVVVAAASEAGGVVVNGMSGYRRNGPGANS
CCCCCHHHHHHHHCCCCCCCHHHEEEECCCCEEEEEECCCCCEEEECCCCCCCCCCCCCC
ALVVTVGPADFPGASPLSGIEFQRDLERRAFAAGGGGYLAPAQSLMAFLGEGKGRVASSY
EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCC
RPGVVECELTPLLPPAVAATLKEGIRHFDRKMRGFMSAEATLTAVETRTSAPLRILRAPD
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEECCC
LQSVSHPGLYPTGEGAGYAGGIMSAALDGIRVADAIAARLRAESQKP
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8396545 [H]