| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is cheB1 [H]
Identifier: 197118050
GI number: 197118050
Start: 1929393
End: 1929800
Strand: Direct
Name: cheB1 [H]
Synonym: Gbem_1663
Alternate gene names: 197118050
Gene position: 1929393-1929800 (Clockwise)
Preceding gene: 197118049
Following gene: 197118051
Centisome position: 41.81
GC content: 62.75
Gene sequence:
>408_bases ATGACAGCAGAAAACCGGAAAAAGATCCTCCTGGTGGACGACGACAAGTTCTTTCAAAAGGTGATGTCGGACGCCTTCGA GAGCGCCGGCTTCACGGTGGCCACCGCCGGCGACGGCCAGGCGGGGGTGGAGGCTTACGCCCAAGACCGGTTCGACGCCG TCGTTTTGGACCTCGTCATGCCCAGGATGGGGGGGGTAAGCGCCTCCCTCGAGATCGCCAGGCTGTCGGAAGATCCGGAT CCCGTCCTCATCCTCTTGACCTCCATGTTCCAGGGCGCCCCGCACGAACACCCGATTCCGGAGATGGGCGCCAAGGTGCA CATCCCTAAATCCACCCCACCGCTGGACATCGTCATCATCGTCGAGCAGCTCCTGGAAAGAAAGAGGCGCGGCTCCAGCG CCGCCTGA
Upstream 100 bases:
>100_bases TCTGCCGCTTGCCCCCCCGAGGTAGCGGGGGAGGATTCTCCCTTCCCTTTTGCAATACATTTTTGTATGATGGCGCATTC CATCGCGCTTTGAGGTTGAA
Downstream 100 bases:
>100_bases CGGAAACCCCATGCCATTTCTGCTACGAAACCTCACCCTCTCCCCCGGAGAGGAGGAGCGCCTATTGCGCCCTCTGGCCG CGGCGAAGCTGGGCGTGCCC
Product: response receiver
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MTAENRKKILLVDDDKFFQKVMSDAFESAGFTVATAGDGQAGVEAYAQDRFDAVVLDLVMPRMGGVSASLEIARLSEDPD PVLILLTSMFQGAPHEHPIPEMGAKVHIPKSTPPLDIVIIVEQLLERKRRGSSAA
Sequences:
>Translated_135_residues MTAENRKKILLVDDDKFFQKVMSDAFESAGFTVATAGDGQAGVEAYAQDRFDAVVLDLVMPRMGGVSASLEIARLSEDPD PVLILLTSMFQGAPHEHPIPEMGAKVHIPKSTPPLDIVIIVEQLLERKRRGSSAA >Mature_134_residues TAENRKKILLVDDDKFFQKVMSDAFESAGFTVATAGDGQAGVEAYAQDRFDAVVLDLVMPRMGGVSASLEIARLSEDPDP VLILLTSMFQGAPHEHPIPEMGAKVHIPKSTPPLDIVIIVEQLLERKRRGSSAA
Specific function: Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR [H]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR008248 - InterPro: IPR000673 - InterPro: IPR001789 [H]
Pfam domain/function: PF01339 CheB_methylest; PF00072 Response_reg [H]
EC number: =3.1.1.61 [H]
Molecular weight: Translated: 14632; Mature: 14501
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAENRKKILLVDDDKFFQKVMSDAFESAGFTVATAGDGQAGVEAYAQDRFDAVVLDLVM CCCCCCCEEEEECCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH PRMGGVSASLEIARLSEDPDPVLILLTSMFQGAPHEHPIPEMGAKVHIPKSTPPLDIVII HCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCHHHHH VEQLLERKRRGSSAA HHHHHHHHHCCCCCC >Mature Secondary Structure TAENRKKILLVDDDKFFQKVMSDAFESAGFTVATAGDGQAGVEAYAQDRFDAVVLDLVM CCCCCCEEEEECCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH PRMGGVSASLEIARLSEDPDPVLILLTSMFQGAPHEHPIPEMGAKVHIPKSTPPLDIVII HCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCHHHHH VEQLLERKRRGSSAA HHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA