Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197117394

Identifier: 197117394

GI number: 197117394

Start: 1162080

End: 1163321

Strand: Direct

Name: 197117394

Synonym: Gbem_1004

Alternate gene names: NA

Gene position: 1162080-1163321 (Clockwise)

Preceding gene: 197117393

Following gene: 197117395

Centisome position: 25.18

GC content: 62.08

Gene sequence:

>1242_bases
ATGGCATTTATCAAACCGTTCAAAGCGGTACGCCCGAAGAAGGAGCTGGCCGAGAAAGTGGCCGCTCTCCCCTATGACGT
CATGAACACCGAAGAGGCCATCGCGATGGCCGCCGGGAACCCGATGAGCTTTCTGCACATCTCCCGCCCCGAGATCGACC
TGCCGCAGGGGACCGATGTCCACTCCGAAGGGGTCTACGTCAAGGGACATGAAAACCTGAAGGGTTTCCTGGCGCAGGGT
GTGCTGGTTCAGGACGAAAGCGAGCAGTATTACGTCTACCGCCAGAAGATGGGGGGGATCACCCAGACCGGCTTGGTCGT
CTGCGCCGGGGTGGATGACTATCAAAGCGGCACCATCAAGAAGCACGAGCTGACCCGCGCCGACAAGGAAGAGGACCGGG
TGAAGCATATCGACGTTTTGAACGCCAACGACGAGCCGGTCTTTTACACCTACCGCAACAACCCCGGCATCACCCGGACC
ATTGAAGAGGTCACCAAGGGGGAGCCGGTCTACGATTTCACCACCGACGACGGCGTCTCCCATGCCCTTTGGACCATCGC
CGACCGCGCCCTCATCGACTCCCTGACCAGCAGCTTCGCGGCCATCCCGACCCTCTACGTCGCCGACGGCCACCACCGGA
GCGCCGCGGCGAGCCGGGTGCGCGACCTCAGGAAGAACGCCAACGATAAGCACACCGGCAGCGAAGAGTACAACTACTTC
CTCACCGTGATCTTCCCGGACAACGAGATGACCATCATGCCCTACAACCGCGTGTTGAAGGATCTCAACGGGCGGAGCGT
GGCCGAGTACATGGCCCGGGTCGCGGAGCGCTTCGAGGTTACCCCGGTCTGCGGCCCGGTGAAGCCGGGCGAGCGGCACC
AGTTCGGCATGTTCCTGGCCGGGAAGTGGTACGAACTCGTTCCCCGCGAGGAGTCCTTTTCCGAGACGGACCCGGTGGCG
TCGATGGACGTCTCCATCCTCCAGGACAACCTGCTCAACCCGGTCCTCGGGGTGCGCAACCCGCGCACCGACCAGCGCAT
CCATTTCGTGGGGGGGATCCGCGGGGTTGAGGAGCTGGAGAGGGTGGTGAATTCCGGAGAATACGAGGTCGCCTTCTCGC
TCTTCCCGACCTCCATCGAGGAGCTTATGTCGCTGGCCGACGTGGACAAGATCATGCCGCCCAAGTCGACCTGGTTCGAA
CCCAAACTCAGAAGCGGTCTGTTCATCCACATGCTCGACTAG

Upstream 100 bases:

>100_bases
TTGCGTCCGAACCTTGCGTTTCGGACAGAGAGTGGCGCGCAAAACCGGGCGCGGCGCCAAGAACATAGAAGGTAGAAAAG
AAGCTAAGACAGGAGCAGTT

Downstream 100 bases:

>100_bases
AAAAACTGCTGTTCTCACCGACAAGAAGAACAAGACACAGACGGAGGAAGTAGATGCGCAACGTAGAGAAGTTCATCGTC
GTTTTGCTGCTCCTGGCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MAFIKPFKAVRPKKELAEKVAALPYDVMNTEEAIAMAAGNPMSFLHISRPEIDLPQGTDVHSEGVYVKGHENLKGFLAQG
VLVQDESEQYYVYRQKMGGITQTGLVVCAGVDDYQSGTIKKHELTRADKEEDRVKHIDVLNANDEPVFYTYRNNPGITRT
IEEVTKGEPVYDFTTDDGVSHALWTIADRALIDSLTSSFAAIPTLYVADGHHRSAAASRVRDLRKNANDKHTGSEEYNYF
LTVIFPDNEMTIMPYNRVLKDLNGRSVAEYMARVAERFEVTPVCGPVKPGERHQFGMFLAGKWYELVPREESFSETDPVA
SMDVSILQDNLLNPVLGVRNPRTDQRIHFVGGIRGVEELERVVNSGEYEVAFSLFPTSIEELMSLADVDKIMPPKSTWFE
PKLRSGLFIHMLD

Sequences:

>Translated_413_residues
MAFIKPFKAVRPKKELAEKVAALPYDVMNTEEAIAMAAGNPMSFLHISRPEIDLPQGTDVHSEGVYVKGHENLKGFLAQG
VLVQDESEQYYVYRQKMGGITQTGLVVCAGVDDYQSGTIKKHELTRADKEEDRVKHIDVLNANDEPVFYTYRNNPGITRT
IEEVTKGEPVYDFTTDDGVSHALWTIADRALIDSLTSSFAAIPTLYVADGHHRSAAASRVRDLRKNANDKHTGSEEYNYF
LTVIFPDNEMTIMPYNRVLKDLNGRSVAEYMARVAERFEVTPVCGPVKPGERHQFGMFLAGKWYELVPREESFSETDPVA
SMDVSILQDNLLNPVLGVRNPRTDQRIHFVGGIRGVEELERVVNSGEYEVAFSLFPTSIEELMSLADVDKIMPPKSTWFE
PKLRSGLFIHMLD
>Mature_412_residues
AFIKPFKAVRPKKELAEKVAALPYDVMNTEEAIAMAAGNPMSFLHISRPEIDLPQGTDVHSEGVYVKGHENLKGFLAQGV
LVQDESEQYYVYRQKMGGITQTGLVVCAGVDDYQSGTIKKHELTRADKEEDRVKHIDVLNANDEPVFYTYRNNPGITRTI
EEVTKGEPVYDFTTDDGVSHALWTIADRALIDSLTSSFAAIPTLYVADGHHRSAAASRVRDLRKNANDKHTGSEEYNYFL
TVIFPDNEMTIMPYNRVLKDLNGRSVAEYMARVAERFEVTPVCGPVKPGERHQFGMFLAGKWYELVPREESFSETDPVAS
MDVSILQDNLLNPVLGVRNPRTDQRIHFVGGIRGVEELERVVNSGEYEVAFSLFPTSIEELMSLADVDKIMPPKSTWFEP
KLRSGLFIHMLD

Specific function: Unknown

COG id: COG4198

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46455; Mature: 46324

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFIKPFKAVRPKKELAEKVAALPYDVMNTEEAIAMAAGNPMSFLHISRPEIDLPQGTDV
CCCCCCHHHCCCHHHHHHHHHHCCHHHCCCHHHEEEECCCCEEEEEECCCCCCCCCCCCC
HSEGVYVKGHENLKGFLAQGVLVQDESEQYYVYRQKMGGITQTGLVVCAGVDDYQSGTIK
CCCCEEEECCCHHHHHHHCCEEEECCCCCEEEEEHHHCCCCCCCEEEEECCCCCCCCCEE
KHELTRADKEEDRVKHIDVLNANDEPVFYTYRNNPGITRTIEEVTKGEPVYDFTTDDGVS
HHHHHCCCCHHHHHEEEEEECCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCCH
HALWTIADRALIDSLTSSFAAIPTLYVADGHHRSAAASRVRDLRKNANDKHTGSEEYNYF
HHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEE
LTVIFPDNEMTIMPYNRVLKDLNGRSVAEYMARVAERFEVTPVCGPVKPGERHQFGMFLA
EEEEECCCCEEEEEHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEC
GKWYELVPREESFSETDPVASMDVSILQDNLLNPVLGVRNPRTDQRIHFVGGIRGVEELE
CCHHEECCCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCEEEEECCCCCHHHHH
RVVNSGEYEVAFSLFPTSIEELMSLADVDKIMPPKSTWFEPKLRSGLFIHMLD
HHHCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCEEEEEEC
>Mature Secondary Structure 
AFIKPFKAVRPKKELAEKVAALPYDVMNTEEAIAMAAGNPMSFLHISRPEIDLPQGTDV
CCCCCHHHCCCHHHHHHHHHHCCHHHCCCHHHEEEECCCCEEEEEECCCCCCCCCCCCC
HSEGVYVKGHENLKGFLAQGVLVQDESEQYYVYRQKMGGITQTGLVVCAGVDDYQSGTIK
CCCCEEEECCCHHHHHHHCCEEEECCCCCEEEEEHHHCCCCCCCEEEEECCCCCCCCCEE
KHELTRADKEEDRVKHIDVLNANDEPVFYTYRNNPGITRTIEEVTKGEPVYDFTTDDGVS
HHHHHCCCCHHHHHEEEEEECCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCCH
HALWTIADRALIDSLTSSFAAIPTLYVADGHHRSAAASRVRDLRKNANDKHTGSEEYNYF
HHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEE
LTVIFPDNEMTIMPYNRVLKDLNGRSVAEYMARVAERFEVTPVCGPVKPGERHQFGMFLA
EEEEECCCCEEEEEHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEC
GKWYELVPREESFSETDPVASMDVSILQDNLLNPVLGVRNPRTDQRIHFVGGIRGVEELE
CCHHEECCCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCEEEEECCCCCHHHHH
RVVNSGEYEVAFSLFPTSIEELMSLADVDKIMPPKSTWFEPKLRSGLFIHMLD
HHHCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA